XLOC_005270 (gene) - C. hemisphaerica

Overview
NameXLOC_005270
Unique NameXLOC_005270
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000093:460301..464802-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005270 ID=XLOC_005270|Name=XLOC_005270|organism=Clytia hemisphaerica|type=gene|length=4502bp|location=Sequence derived from alignment at sc0000093:460301..464802- (Clytia hemisphaerica)
TTTCTTGCAAGACGCGCTCTGATTGGTCTAAACAGTAGCCTGTCTTTATA TTACTCAACATCTTGTAAAAAAGTTCAGTAGTCATTTCAGCAAGTACAAA CAAACATGAGCTCAGAGACAAGAAAACAGAAAAATAATGCAACAACACTT TTGATCAAACATGACTTAGAACGGTCGATAGGCTTGTATGAGATGAAATA AAATTTTCGGGTATTACAAAATTGAGAAATGGATCTGTTAATGTCACATG TAATTTTTCTTGTGTGAGGAATATACTAACAAACTCAACAGCTAATTTAC AATTTCCTTCTTATTGAAAGAGTTGTCAAGTTTTGTGTCAAGTTATCGAA ACTCAGAACATTTCAGTATTTCAGAAACATAGTCTGAATTATTCGGCAGT AAATAGAATGTTCCCAGGTTTTCCTAATACAATAATGACCGGTTAGTGAG GGCTGTACTGAGAAATATTGCCCGAGGTCAAGTAACGACCGAGCTTGCGA GGTTGTTACGTTGACCGAGGGCAATATTTTCAGTACAGCCCGAAAAAAAC CGGCCATTATTGTATTTGTTAACCGTTTCCTTCAGCTTTGATGGATTTTT AGCGCTTTATCCAGGAAGAATAGCGAAATAAAGCAGAAAAAACAAGCGAA AAGAGATAAAAAATTGCTATAATTTCTGACGTCCGAAATAAAAAATGAGA GAAATGATGTCAACGCATTGTTCATTTTCCTTTGAAAAAGTGACGTCACA ATGAATTTTCCTAACGACGGGCAACTCTGGACAATGTAGGGCTCTCGTCA TGCGAAAAGAACCAATTGCATTGCGCAAAAAGTCGTGTAGCCCGCTTCGA AAAAGTAACCGGTTAACAATTTCTTGAATTCAATGGTTGGATACAGCTAC TCTAGGGGTCATTAATCTGAAGTTTGGGATTCAGGAGGGCATTTACTCAA TGAATACTCGACTGTTTTGTCAGAAACCTCTATACTAAGGAGCAGCAGAT CTGAGGTGGTACAAAACTTTACGACGGATAGTTTCGGTTAACCATTTTCT TTTGAGGGAATGAAAACTCTGTAATAAATTTTTTATGGTCAAATGTAAAT ATTCTCTTTAATATTTAGAAAATCAAAATAAAACATCATAAAATGAAGCC ACAAACTCCACCATATAAGATCATCGAGGCTGTTGGTTTAGTTTTCATCA TTTTGGGTCTGTTTACATGTGTAACGTTTTTGTTCCATTCAGACTATGCT TATTTCGGACCAGCAATGATCGGTCTTGGTATTTGCCTAATGTGTGGAGG GCGTTATATGTATTATCGTTTATATAGCAAGCTGGAGAATAGTTATGACC GCCATGTTGACGACGTAGAGGCTCCTGTTAGCTCTGAGGAACAACAACAA AGAACTTCAATAAATTCTCAAAATGTGTCTGTAGCCTACAGTACGAATGG TGGATACGCAGCATCGCAACAAGGTGTGTAGATAAAGGTTTGTTTCTTAC TCAAGTTTTTTTTCTCTTGTTTTTATTTTTAGGTACACGTTTTTTTATAA GAACATTCAAAATTTTTGAAGCCTTCGGATGTTCTTAACTTTTTGAGTTT CAAGCCTGAAAATGTTCTTAACTTGTTCTTAATATCTTTGCAACCGAACC CTTATGTTCTTATAGTTTGTTCTTATATTAAAAAACGTGTAACTTATAAT TTCTTTGTGAGTCAAAACTGCTTTTGCGAGGCAAATAAAATGTAAAAATT TGCAATTCTCATGAATTTAACGAATTATCCCTTTATTTTAAGGATAAAAC CCCGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNCCCCTTACAGTGCATTTTAAACATG TTGGAAAAGGTACCCTTAGGACCCGCACATACCCGTCGGGCCTTTTGCCC AGCTGCCCCCCCCCCCGGGATAAAACCAAAAACTACCGCTTTAAAAATGC ACAGATTTGTGAAAATAAGTAAACCTTTCAGCTGATGAAAGGTTGTTATA TTATTCTAAAATCCCTAGAACTTCACTTTTATGTTAAAAACCTTGAGCTG AGCTCGCCCCCGCTTTAAATATTTAAGTTTTATTAGAGCCTTTACAGGGG GGGGTTGTACTTTTACGGTGTGACGGGATTGGGCCTTTTTTAGTACGGTA TTACGGGATTTGACGAAAAAAAGACGGGAAAACGGTATTTTAAAATCAGA CGGTGACGGTTGTACAAACCGCTGTGACGGTGTTATTATTTTTTTCACTT TTCGAGATTCCGGGATTCAGCAAAAATTATGACGGGAAAACGGTATTTTA AAATTAGACGGTGACGGTTGTACAAACCGCTGTGACGGTGTTATTATTTT TTTCACTTTTCGAGATTCCGGGATTCAGCAAAAATTTTGGCGGGAAAACG GTTTTTCGAACCCCCCCCCCCCTTTACAGTCAGTTGAAAACCGGCTGCTT TCGCAATTTAGGCTATACTAGGTATATATTATGCAATGAATAGTTAGTAG GTAAATTAGTATAGAACTTTGATGAAAACAGCTCTATTGGAAGGCAAACT TTCTCATAAAAGTCACGCGGAAATCACGAGAAAGTCTGCGCTGTGATACA TAGTTAAACGAAAAACTAGAAGTTCATATTTCAAATATTGCAAAACCTCC GAAATCGCATATCACAGTATCTTTCTTTGTAACAGAAAGTGCAAAAATTT CTGTTTGACCTCATTTCACGAAAAGACTCTTTTTCCGCGCGATCTAAAAA TCCTTAAAAATGCGGGTCCTAATCTATACTTAAGGGCTACATACACTACA CAATATATTGCCAGGTAATATATTGGCAATTTATTTATACAGACAATATA TTGTTAAGGTGTCCGCAATATATTGTCAGCTCGATTTGCAATATTCCAAC AATATAGAGGGATTTTTAAAGAAAAAATTTCTTTTTATAATAGAGTACCT GATGTTTACTTTGTACATTACGGTCCGAAAACTATTTTGTTGAATATTTC TCGTCAATATATTGTGTTTATATATTGTCCTTTTTAGACTAATAGTTTTG TTAGAAGAAGAGAAGTTGATAAAAATTGCTACGGCTTCAACAATGCAGAC TCAAAAAGAACACCAAAAAATGAATCCAAAATTTTGACGAGTTGTTGTGT TGTCGAGTTTTGTTAATTAGAAATTGGACTGTATTTAGGAAGTGTTCGAG CTTCATCTTTCTTTACTAAAAATTCTTATTCATTGTTTTCTTTTTTTAGA TGTTAGAGAGGGATCAAATGTGATTTAGAAGTAGAATGCCACCCACAGAT GTAAACTTCCTGCGAAAGGCTTGACCGTGTTGTCATTTGCAATTTTGTCC AAAGTTAAGTCTGTTTTAAGACTTTGATTGGTTGGAATGTACTAGTTATC CAGGCAGGCACACGACGCGGCAATTCAAAGTTCTACTCACGTTATATGGA TATTATAGTCGCGACATGGATGTTGTTAAGATGTTTTGTTTTGTCTTGGT TGCCCTCGGAAAGACTCAGTAATTTTTGGATACCTATAATAGATAGAAAA CACCAAACACCCCGGAGCTATTCCCTGATAATTGATATTTGTTCGATTTT AGTAATTTCTCGTTTCAAAAACTAAAACGTTCATTTTAAAACCATCAACA ATTAGGTTTCGTAAGAGCGGTAATGATACACATTTTTGCCAAAAACTATA TTCGCCATAAAAAGTTAAATGTTTAAAGGACATTTTTGCTAAATTTGTAT CATAATTTTCAATACTTTGACAGAGCCTTCGCTAGGGCGACTTTGTTTTA AATTCACAGAATTAAAGTGTTCCAAAACCTTGGGCATAAATGTTAAGCTT ACTCCTAAAGTAAAGGTGTTTTTATATAGGACATTTCTTGGGATGGGGGT CAAGTATTTTATACATAGTAATTTTTTTTAAATGACAACTATGAAATTTT AGAGACGTAGAAATATGAATTAATTTCAAAATAGAATAAAAATGAAAATA AAAATAAAATTAGTTACATACCTGTTATTTTTCCTTACTTTTCTTGTTTT TGTTCTTCATGTAACACGACCATTATTCATTTCCATTTTATTGTCAACTA AT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009411TCONS_00009411Clytia hemisphaericatranscript
TCONS_00009410TCONS_00009410Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009411-proteinTCONS_00009411-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000093supercontigsc0000093:460301..464802 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.68 0.41 0.71 1.75 3.12 3.25 11.4 13.41 7.67 7.97 9.68 6.28 5.33 5.31 8.83 8.84 7.23 11.09 5.13 5.31 8.03 9.6 7.85 7.58 6.23 5.11 2.68 2.37 19.34 16.24