XLOC_005175 (gene) - C. hemisphaerica

Overview
NameXLOC_005175
Unique NameXLOC_005175
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000091:19245..24482-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005175 ID=XLOC_005175|Name=XLOC_005175|organism=Clytia hemisphaerica|type=gene|length=5238bp|location=Sequence derived from alignment at sc0000091:19245..24482- (Clytia hemisphaerica)
TACACAGGTTGTGATAATGGGAGTGAATCGCTTTTTTCTGGTCCTTCTCT TAGGTAAGGCTTTATGAATCATTTTTCGGTCCCTTTCAGGACTAAAGTCG AGTCTCTTCAATTCGAACCTCTATAACTCGAATGTCTTCTTAACTTGAAC AGGTTTTCTCCTCATCCTTACAGATAACTACTTTAGGCGTAGAAACTTTC GCGAGCAGAAACTTTCGCGATTTTCGCGAATTTTGGCCCTTTTCGCGAAA GTAAATGTCTTTAAAAATTCTAGGAAGGGCCATTCGCGAAAGTTTATGCT CGCGAAATACTCTTGACAAAATAGAAAATCTGTTAAACTTCAAACTTTGA ATAAAATGTAGCTTTTATGGCACTTTTTAGCCTGCTAAAATACTAATAAG TCAAAAGACAAATATTTCAAGCCAATCCAAGAAGTATTCGACCCTCTAAG CCATTTTTTCATGTGAAAATTCTCAATTTTACGTCTTGATTCGCGAAAGT TTATGCTCGCGAAAAATATTTTTCCGTTAAATTCGCGAAANNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTTTTCCGTTAA ATTCGCGAAAGTAAATGTCGTGAATTTCGCGATTTTTCGTCCTCGCGAAA GTTTCTGCTCGCGAAAGTTTGTACGCCTAAAGTATGCCTTATAAACTTTT CTCAGTAACTCAAAATTTCCTTAATTCGAACAAATTTGTGCTACCCGTGC GTGTTCGAGTTATGGAGACTCCACTGTATTTAAAAATCGTTAATTTTTTG TCACGTAAAAGGAGTTTCAGAAACTGTATTCGTATTTTCTTTTAGGGCAT TGTAGTTTGGCAGTACCCTGGGGAATCAAACTTCGAAATGGAAAAATCTA CCCACGCCCAGGAAGAGGATTGTACTCTACCGAACAAATTGGTAAGTTAA AGTGATACTTTTTCACATTTTCAAAACGAATGGCTAGTTTTAAGACCGAT GATAAGCATTTAGTTTTCATCGTCCAAAGTCGTAACATGCCATCAGCAAC CCGTACCTTGCTATAATATTAAATATTTAGGCGCCGTTGGAAAGATATTC TCGACGAAAATAATCTAAAATATTATAGATTATTGATAAATTAGGTAGGA GAACGAAAATAAAAAGGGAAAGTTTTTTCTACTGGTTAGAAACTAGCAAA AGCATTTCAGAATATTTAAAACTTTCTGATTTCAAATCTGTATTCAGTCT TTGCATAGGTCATTTTGGCCATATTTAGCCGCGAGCTTGACTTTTTTTAT CAATCATTTTTTTAGAGAATGGGAAAGGGCAAGAACTGGACATGCTTTTC AAAGATGGAATAAACCCATTCAAAGCAAGTGGACCCAGAGCACGAAGAGC TGTTCTTGTTTTTGAGGGATTGAAATGGCCAAATTCCATTGTTCCTTACA GATTCGCGGAGGAAAATCCACTTTGTAAGTTAAAAGATTGTCGATTGAGT CAATTGAGATCTAAGAAATATTCCACATAACATTGAAAACAAAGCACACG CTTTTTCTACAGTTAACGGACAACTGGATACTAACTAAAACTGCTTACCT AAAGTCTTTAGAATGATTTTCAGTGTGGACAAAATTTCCCCAAAACTTAA TATATATCTAACGGGCTACACTACACGATACATTGTCAGGCAATATATTG ATGATATATTGCTGAGTGTCCGCAATATATTGAAAAGTTGTCCGCAATAT ATTGTCAGCTCGATTTGCAATTTTCCAACAATATAGAACGATTGTTTACA GAAAGAAAATTTGTTTTTATGATAGAGTAAAATATTGTTCGTCAATATAT TGTGTAGTCAAAGTAGCCCTTAACGACTTATTTCTCAATCATCTGACAAA TTGAGAAATGGGGTCCTCTTAACTCGAGTCTTAGGTTATTGAAAAGCAAA ACCCGACAAAACAATTTAATCTAAAAATGACTAATACATAATCAAACAGC TAACACGAGTATTTGTGGGCTGCTGGCCCGATCCACTGTCGGATTTGTAT TTCTTCTATACTACCTGTGGTTATGTAGAGGTATGTGGTTCAGACACGAG TATTTGAAAGTGTTTGCTCTTGTTTAGCTCCATCTTTACGAACAAAGACT TTGGAAGGAATGAAGAGAATTGAAGAGACAACATGTGTTCGATTTGTCGA ACAAACAACTGAAAACGATTACGTCATAATTGATGCAAAAGACAATGCGT AAGTGTTTGTACCACATGCAGCACACAACGTCATAATGATGTTCATCTAA CATTCATAATACCTTAATAATCAAAAATAATCAAAAAGCCTTGCTACAAC AGATTCATCAGAACCACAAACATCACGTTTTAGTTCTACTGTAGGACCTG CCATTTTCATTCGCAGTTTTACCAGATCCATCGATTTCACCAGCAAGCAA ATGAACTAGAGAACTAATAAAGCAATCAGGTTTTTTTCAGATTATTTTTG CTAAGGGGTGAACATTGGACTTGGGAAATAATTTTGGGTTACCTTATTTT AGGAAATTCTCATTTTATGTTTTCACATTGGACAATACACGTTCATGTCT TTCTCACTTATCGTCGAGGTAAAGACACATCCTCGATTGAAAAGTATCTG ATGCTTTGCTTGACTCTTTTTTCAGGTGTTATTCATTCGTCGGGCGTATT GGCGGTGCACAACGCCTGAACATGGGCGAAGGGTGCAACTCAGTAGCGAT TGCGATACATGAGCTGATGCACGCTCTTTCTTTTGTACACGAACACAATC GAAATGATCGAGACAAATATGTCATCGTTAAATTGGAAAACATTTTGTCG GGTAAGAAAGTCAAATATTTTTTCAGTATTTCTATTGATATTGTACGCTG GAAATTGTTTTACAACCTTGGTTTATAAACCCAATGCCTAACCGCTTGCG CTAACGAGACACGGGAAAGCTGTCATTCAAAAATACTTATAGTGTGTAAT TTCCAGACCTTAATTAAGAAAGCTCATAACCCTACCGGTGCCCTTACAAG GATCCCTAAGTTAAGTATCAGGGTAAGATATATTGTGACTCTCGAGCTCC AACCCTAACCCGAACTGTTAATAACCGAACCCCCGTCTAGTTCCATAGAT TGAAAAATTTCACTTGCATCTTGGTGGGTGATATCGTCTGCCAACCGCTG AAAATCGCCAGTTTACAAACTAGGCAAGCATTGCTCTTTACTTTGGCATT ATATAAATGCGTATTGACTAAAGATAACTGGATTATGTTTCTCCTTCTTC AGGGGCGGAAAAGTCTTTTGAGAAATACGAAGATTTTGAAATCGACATTT TGGAAACTCCTTTTGACAAGCAAAGTGTGATGCACTATTCAAAGTGAGTG ATTTGGCACGTGTGTAATTTGGCTAAAAATTTGTACTGTTACGTTGTAAA AAGACGATTCATTAATATAATTTTTTTGATCAACAATAAACTACTTTCAG GGGGTCAGCACTGTGACGACAAATCAAGAATCTATTTATAAGCACGTTCA ATAAATACAATAGGATATGTGCTTTCAATCTTCGATTCTTTGAAAAGTAA TACGATACTCGATAAAATTCCGTCTCTATAGGTTAAGTTTTAGAGAAATA TAAAATGTTCTCTCACGGTATCTGAATTTCCCGTAAATGGAGGATCTTGT AGAAACATTTATATTTTGTGGTTGACCAATGTTCAAGGCCGTTATTGTAA TAAACTGACAGCTCCTAGTCCAAAAAGTCCTGCTCTTTCTGTATTTCGTT CAGTTCAAACCCAGGGGAAGGGTAAAAATGGGTGCCGGGTATGTGCGAGC CGGGTCCCTTTTTCACACCCTCGAAAGTCTCTCAAAGGAGTACAAAAACC ATTAAAAAGAGAATTGAGTCTCTGCAAGAGTCCAAAAATCTCTCGAAGGG TCGTGATTTTTCCAAAATTTGGACAAAAATCGAGTGAAAATCGATAAAAG ATTTGAGAAAAGTCTCTCATAGGGTCCCAAAAACACCAATTTTTTACAAT GACTTTGTTTTCAATTCTTTCCAGCTTTGCATTCACCAATAAGAATCCTT TCGATGGCGAATCAGCAATGACTTTAATCAGTAAAGGACCATTGGGTGCA AATGAAGTTCTTGGGAATTCAGAGGGGTTGAGTTCTCTTGATATACAGCG TATCAACACCAGGTATGTTTTACATTAAGCATGTTGTAAACTTTTTTTAG CGTTGATTAGTAGTTGATGATTGAAATATCTTGAATTGTGCTCGACTTTG AACCATTGATGTACGTCTCAATTCGGTTCCTTTGGAAATAAATCCAACCT TGTAACTTCTCTTATAGATACTGTCAAGGTGCTACACCGCAAACTAAAAC TCCAACAAAAACTCCACCAGCGACTGAACAGCCGACAGAAAACCCTGAAA CACCTGCCACCGAAGATCCACAAGTTACCACCAATCCTGTTACCAAAAAT CCTGTGACTGAAAACCCCGTGACTGATGGCGTCACAATGGAGCCTTTGAC TGAGACACCGGAGCCGTTGACCAAAACAGCCGCACCAACCGAAATTCCGC CTAAAACACCTTGTCCTACAAAACGACCCAAAGAAAAGCGATTGAAAAAG AAAGGCTCGTGGTGGAAACGTATAACTCGTAAATGGTGGCAAGGGCGAGG GCGTGGCGGGCGTAAACGTGTGCATCAAAAAGTTTCAAGAAAGGGCGGCT CAAGACGTGTAATCGGGCGTCATGTCAAGAATTTTTTTAAGAAAGCAATA TTTGGAAAATAAATTTTGAGAAGAAGATTGACTAATGTACGGCACCATTT TTAGTAAGAATTGCACCTTTTTGCACTTTATATATGCACTTCCACAAGTG GCATATTCTTTCATATATTTAAAAGATTGCAGTTTTTAGGAGTGTCAAAA ACACTGCATTTACAAATGGAACCTTCTTCGCATTGTTGGAATCAGTCAAA AGTTCTTTTTCAGCATTTCTGATCTCCTACCTGATTTTTGAGCTATAAGT AATGAAATTAAACAAGCAGCCTGTCGGCATTACGGCCCAGCTCTCTTTCG GTATCGTCGGGCATCTCGCATCTCTCCATCATTCCTGCAGATATCAATCA GTACTTTTTTTTATTTTCAGACCCTACAGTTGATATGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009215TCONS_00009215Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009215-proteinTCONS_00009215-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000091supercontigsc0000091:19245..24482 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.15 0.36 0.22 0.27 0.03 0.08 0.06 0.09 2.55 0.99 2.48 2.51 9.27 10.1 0.04 0.03 0.56 0.61 18.12 13.48 4.2 3.65 1.07 2.17 2.48 5.91 0.25 0.24 0.32 0.22