XLOC_005046 (gene) - C. hemisphaerica

Overview
NameXLOC_005046
Unique NameXLOC_005046
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000089:174218..179348-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005046 ID=XLOC_005046|Name=XLOC_005046|organism=Clytia hemisphaerica|type=gene|length=5131bp|location=Sequence derived from alignment at sc0000089:174218..179348- (Clytia hemisphaerica)
NNGGTAAACGAGTCATCATGCACCCAAATTATGGACAAGGCGGAGCTTTG AACGCTGATGTTGCCTTGATTGAATTGAGAACACCACTTCGATTGAACGA CCGTGTTGTTAGAGCTTGTATGCCACAACAAGGTGTCTACCCACAAGCCG GAAAGAACTGTTACATCGCCGGTAAGATATTTGGGAAGGTGATATCTATC AGCCTATATCAACCCGGTCAGGGCTGATCCNGGAATGTCCCCAAATACGA AAATCACTTAAACCATTCAGACCCAAAAAACCTTTTAAGCTGTTTTTGGC CCAAATTTGGCCAAAAAAATTTTTCTTAAAAATCTGGCTCCGTCACATTT TGGGCATTGCCATTTTGCATCATTGTGCAAAAAATCAGAAACNTTGAAAA TATCTTATCATGTGTTAAAGACTCGAAAAAGAGACAATAAATCTCGTCAG TCCAAAGCCTATTAAGCACATTGATAGCTTTGGTTTGAGTCAATTTAACT TCCTTTCTAACTTTGTTCTCTAGGATGGGGAGCAACAAGTCACCCAAGTA GAGGAGCTCCACCTAAACTCCAACAAGCCAAATTACCAGTTGTCCAATCT CCACACAAAGGTTGTCATAACAACAGAGAAGTCGTTTGCGTTGGTCTCGG ATTCGGAAGCCAATCTGACGGTAAACAACATCCAAACGCATGTCGTGGTG ATTCTGGTGGTCCATTGATGTGTCAACAATCAAACGGATCATGGACTGTC GAAGGTGTTGCTAGTTATGTTTACACTTATTGTAAATACTACACAGCTTA CGCTCCAGTCAACAAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNTGAGCCAATCCTGAGAAAAGCTGGTAACAG ACGGACGGACGGACGGACATGGGTTAATTTATAGAACCTCCACCGGGGCA CCCGGCGGTAGGTCCAAAAATCAGTCATAGTGACAGATCATACCTCGAGT AGAATAACAGTGGAAATATTATTAATTCATGATGCTTTTGACAATTTGAT CGAATCATCAAGAGAATCAAAATCATTGGCCCTGTTTGAACAGTTTTTAC TCATTGGTCTTCATAATAAGTTTTAGTTAATAATAAGGCCCGTATTTTAT GAGTCGAGGGAGAATTTGAAATTTCGGGTCATAACTGAAGAGAGGAGGGT CTCATTTCTGGAAGTTCATCTTCTGTTATATTTGATTTCCTACATCACGC TATAGTCCCAATATCAAAATCTGTGACCTTTAAGATTAGGATTTTTGCGG CGTCAAAAAATTGAGACCTGCATTTTCAGGCTTTTTAGACTTGTTTTCGA CGTTGAGTACTTATTTTGAAGTCAATTCCAAGTTTCGCATTTTACAGTAA TTTTAAAGGCTTTGAAACGCTGTAATTGCGTTTGTATTTTTAAGTAAGAA GTAAATTGTTGTACATTTTTCTTGTTCAAAAGTTTGCACCCTATTCGATA GACTTATAACCATATGTTTCATTTTTGACTCTCTTTACGACAAAGTTCAC AAAAGTAAACGGACTCTCTTCCTCTCCTAAGGGCGTCTAAATATCTCTGC TATCTTTTCTGACAAAAATTCATTACTTTATATTCACTAACTATTCACTA TTATTTCTTGTCGACGAGACCTGCATTCTGTGGGCCACAAACCTGCATTT TCTGGTACATCTTCCACTTTTATTAACGATAACGCTACAAAAAGTACTAA GAAAGCAGTAGGAGTTTGGTACAGAAATTTTTTGAAAAGCTTAAGAAATA TATTGAAAAAGTAAAACATTTATCCGTGAAAAACTGAACCTGAATTCTGT GGGGCACCGATAGTTTTGACGCAAACTTGACGTTCTCATTGCCAAAAGTT AAAAAGGTGAAAACGAAAAGAAACTAGCGGGAAAATGTTATCTTAATGAA AGGTTTTATAGGATTTAGAAAATAATTTTCATAATCACAGAATCGTCAGA ATTCGCATCAGAAAAAAACACCTGCATTCTGTGGGCCAGGGACTGTAAAG AAATCTCAGCCAATACGAGTATGAAAGGTAAAATATAGCGGCAAATATTT TTATTAAAGAGTCGGTGTATAACTTTACTCAACTGCACAAGTATAGAAAA ATATTTAATTAACAGTCTTTAAAAGTAACATCATACAAAAGTAACAATTT TTCGTCAATGAAATAAATTGAAAACGAGTTTTAGGAGGTTGAAGTTTGAA ATCAGCAAATTAAAGTCGCATTAACCTCATTGGAATTTGGAAATTACGTT AAAATGTAGCACATAAAAAGTTTATTATATTTGCTTAACGATCAGCTGGT CAAAGAAGTAAAATGAGCAAATGTATATAAAGAGAAAGATTTCAAGGCTG GTGGCAGTTGGGACAAACTGAAATCAGACAAAATGTTCAGATTCATGGTA GGACTAGCATTAATCGCATCAGCATCTGGTAAGCGAATGCCCGAAAGTTT TCGTCTCAAAAATTGTAAAGTATGATAGGTGTGAATGAAAAGTAGTGTGG CACAAAATTTGTGTTACTATGTCATCCTTGCAGAATACTTTCAGCATTTC AGGTGGGTGAGGAATAAAATGCACGCTCTGATTTTCTTGTCCAAATTTAC GAAACTCCAGCAATTACAGGCCTCACAGATTTAAAGTTTAATTGATGGGT TTTGTGTCATTGAAAACAATGCACAGGTTTAGTAAAAATTATACTTCCTA TATACATGGCTTTTATCTCGATCTACTGTGTCCGGCTCAATCAATCCGTA TAAGACAATGCTCGTAAATATATCGTATATTTCAGCTTGGTGGTCGAGTG GTGGAAATGGTGGCGACAACAATGCAAATGCAAAATGTGGAATCTCCAAA GTCGCACAAAGTCGAATTGTCAATGGTGTTGAAGCCAAAGCTGGAGCTTG GCCATGGATTGTCTCTCTTCAATCTTCAGGAGGATCTCGAACCCACTTCT GCGGTGGTACAATCTTGACTCCAAACTGGGTAGGTAAAATATTCGATCAC AACTGCAAGAACACATAAAAGATTATAGATCTGGATATGTTCAAGTTTTT GCACCATCAAAATTCCTTATAATCGCGTGTTTGATTTAGATCTTAACGGC CAGCCATTGCGTGGAAAGAAATAAGAACAATCCAGGATATTTCCATGTCG TCGCTGGAGCACATGATAAATCAAGACAAGAGAGTTCCAAACAGAAAGCT GTTGGTAAACGAGTCATCATGCACCCAAATTATGGACAAGGCGGAGCTTT GAACGCTGATGTTGCCTTGATTGAATTGAGAACACCACTTCGATTGAACG ACCGTGTTGTCAAAGCTTGTATGCCACAACAAGGTGTCTACCCAAAAGTC GGGAAGAACTGTTACATCGCCGGTGAGTTTCAATAATGGCTTGGATAAGT TTTTATAGAAATTACTCTGAAAAGGGGTTATTTTTACATTCAACGCAGCC GAATAAAAGAGAGCTTTCTGTTGCGAGCGTAAGTACGTATATATTGCTTC ACTTTTTTGTAGGATGGGGAACCACAACTCATCCAGGAAACTCACCAAAC CGTCTCCAACAAGCCAAGCTTCCAGTTGTTGGAACTCCACACAGAGGTTG TCATAACAACAGAGAAGTCGTTTGCGTTGGTCTCGGATTCGGAAAACAAT CTGACGGTAAACAACATCCAAACGCATGCCGTGGTGATTCTGGTGGCCCC TTGATGTGTCAACAATCAAACGGATCATGGACTGTGGAAGGTGTTGCTAG TTATGTTTACACTTATTGTAAATACTACACAGCTTACGCTCCAGTCAACA AATACTTGCCATGGATCAAGCAATATGTTCCAAATTTGTAAACTATACAA TTTGTAGATGATATTCCATGTTTATGATTGATAAAAAATAATAAAGGCAA ACTAAAACAATTGACAAGTCTTTGATGATCTTACGCACCAGTTAAGAAAA TGGATAGGATTCGGTACTTTTTGGAGGGTTTTTGAGATTTAATGAATATT GAGTTTCATGGATTTCTGGGTTCAATTTTGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009027TCONS_00009027Clytia hemisphaericatranscript
TCONS_00009026TCONS_00009026Clytia hemisphaericatranscript
TCONS_00009025TCONS_00009025Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009025-proteinTCONS_00009025-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000089supercontigsc0000089:174218..179348 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.89 1 2.38 2.47 0.1 0.15 0.74 0.96 2.33 0.61 0.65 3.04 119.11 120.01 578.65 1473.55 15.34 19.82 2737.82 2740.4 75.49 76.59 1140.84 1159.13 410.54 528.21 8.32 9.98 3.74 10.04