XLOC_005025 (gene) - C. hemisphaerica

Overview
NameXLOC_005025
Unique NameXLOC_005025
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000089:64494..68600+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005025 ID=XLOC_005025|Name=XLOC_005025|organism=Clytia hemisphaerica|type=gene|length=4107bp|location=Sequence derived from alignment at sc0000089:64494..68600+ (Clytia hemisphaerica)
TATTGTTAACATTATTCAAGTCGTTAATTcgtttaatttcaaaaaatcat
aagatAGGGGCTCACTCAAGATGAAACATTATATTTCAATGATCGTGTTG
CTTCTCTCTCTCCTTGGTGTCAACACCAAGTGTACTGGTGATGATTGCAG
TCCAAATTGGTTACCCTTTGATAATATGAATTCAGCGCTCAAAGGTTACG
ATATTATGACTGGTAATCCATTTAGCAATGGTAAGGATCCAGGCTTCAGA
CAACAAATCTTCGTACCAACTCTGAAGAATGCAGAACATCGATACGAACT
CCATTCAGCTTTCACATACGACAATGAAGTGTACTGTGACACNGTGAAGA
ATGCAGAACATCGATATGAACTTCATTCAGCTTTCACATACGACAATGAA
GTGTACTGTGACACGAAAATGACAACTGATATTTCTTCTACCTCAAAAGA
ATACAGGTGAGTGGCTTGGTTTTATTTGCCTCTACCGTTCTCATTTTTTC
TTGTCTTCTCTACATTTATGGGCTAGTAGTGAGAAATTCTcatattttta
ggttttggcTAAAATCACTTTAAATGCACAAACCTTCCCAACCCAGAAAC
TTTTGCAAGGTCTAAAAGCCTTGAAATTCACGACTAAATTTCACGAATCA
TTGgacaaatttcatttcttttaacGAAATAATTGGATGGAAGTAAAAAC
ATATATGGAATCTCGTTAACGCCTTATCTTTGACTATAGGATTAATGTAG
GATAAAATAAGCTgatatttgataattttaaggACTTGTATGGTGAcaat
atttttcattctttcaGATAGCTTTTTGCGAGCACAAACTAAGATATTCT
CTTTTGCCTgtttgcaaaagtttttttatactTAGGGAATTGCTCTTCTA
AGAGAAAGCCTATAGTTTAAGCATTGTCACAATTCCTCTAAATACTTGGT
CTAATCGTTTATAATTTGTTTTAGGAAATTCATGCGTGAAACATCCAAAT
CTGGAGTCGATCTACAAGTTGGAACTGAAACTGAAGTTACAGCTGGCATT
GACATTAAGGGGGCAAGCATATCGGCTACCAAAAAAATTCCAGAACCTTT
CACTAGAGCTTGGGGAAAATCAAACGATTTCCAATCAATGCAGGGTTTGT
TCagtgaaaagaaaagtttaGTAGCGACTTCATTTGCGAAATGCCAGCTT
TACGAAGTTATTATCCATACGTTTTCTTCGATTCCACCTCTTATGGAACC
ATTCAAGAAATCAATCAAAGAACTACACCAAGCAAGTGGTGCTGATAAAA
ACACTCAACTTCGAATCTTCAAATCCTTCATTCGGCATTACGGAACCCAT
TTCTCAATCAAAACATCATTCGGTGGGGAAATCGTCCACAGAACCGTCTT
CTCAAGttcaacaaaaaagaaattcgatggcgaaaaaataaaaaaatgtg
agTATGTGAGAGGCAGTAAAATATTTGGAATCCAAGTCGAGCAAGATAAA
GAAGGATGTTCGTCAACCGATGAAAAACGCTTATACAATGAGCAAGGATC
GACCATTGTCAGCTCAATCATGTCAAAAGGTGCTCCACCCGAGAAAGACA
TCTACACTTGGGCACAACAAGATTTCAAATCAGTTCCTTTGAAATATCAA
TTATCACCCATCATTAATTTATTCAAGAAGAAGTATTTGGATGATGGATT
GCAAGTATCAGCAGAAGGTATTCGTAAATGGTTTGTACCGTTGTATTTCA
ATTTCTGTGTATCGATGTATGGTAGTGAATGTAGCGAAAGAAACGGATGT
GGATATGATGATCAATGTCCATCAGATACTGATTGTGTTGGAGGCCCTAC
CGAATCGCATTATTGCCGAGGTACGTATGTTTATATCAAAAGGTTTTCAC
CTAAGTAACTTCGAAATCTAGATGTGAATTGAtattgcagaaattgaaaa
tttgttttctaCAGTAGATCAGCTTTTGCCTCTAAGGTTTCCCTGAACTT
TCCTGACGTCTGAATTTTAAGACTGTATTatgatttcatgatttttttat
atgaacgtccaaaaactttgaagccttcggatggtatcaactttttgagt
tttaagcttaaaaaagttcttaatatgtttttttttcaccattttttgag
tactattgtccattttcctaaaagaaattgggtgtttaagagtccacgaa
gccttacaatgttcttaacttgttcttatatagactataactagactttt
tggcaagttttttaagcaaagtATAACTATTATCCTTCCACTCTTACTGT
CTCCAAGAAAATTGGGAACTGATTTCTCTTTATCTTGTATTCTTTTACCA
GCTTGGTCAAGTTGGTCATGTCAGCATTGTTCAAAGACAGCCAAACGAAC
ACGCACGTGTCATGGATGTTCTGGCAAAACGACCGAAACTAAAGAAATGT
GCCAAATTGAATCTTCATGCTTCCCTGACAAAGGTAATACAGCCCTGTCT
CAAGTGAAAGTGCTTCGTAGTTTTTTAAAGAGGAAAACAAGTACTTGACA
GGGTTATTATTCACTGGGGGCGAGTTTAGCCGCATTCGGTGAAGGACTTT
ATGTCATAATCGCTACGACCGTTCTATTTAGGTTATATAATTGAAATTAA
CAAAATCCACATTCAGTATTTGTCAAATACTGAATGTGGATTTTGGGATT
TGTTAATTTCAATTATATAACCTAAATAGAATGGTTGTAGCGATAATTAC
TTTTTGAAGTTGCCAATACCAATTTTCTTTAGCtcaaattttacttttca
ttCAATCTACACACATTTACCATCTATCTAcactaaaaatatatattttt
tagttttaagctaCAACACTGGTTCATGGGGCAGTTGGCGTTCATGGGAG
TATTGCCCAAAAGGAACCTGGGTTGTCAAGCTACAAACAAATATTGAAAG
CTACCAAGGAGGTATAGAATCTTTCGTAAAAAGTTGTTTCCGAGAATTTC
ATGGCATggttttgttaaatctcttcAGTTCCTACCAAGTATAATTTTCA
TCATTGTCGTTCTTGAAATTAATTTACTAATTCActtaaataaacaaaat
tacCTCGGATTATAAATTGGTTCTCAGGTCAAATTCTCTTATAAACTGGC
GGGGTTCTATAAATACATGTATTTTGCATCTTGTCTTAGAACAGTTACAA
CTCGGGATAGAGAGATTGAAATTTGCTAACTAACTATAGCTAGATActca
ctttcaattttttctctttgttcaatgaatgtttctttttatccCAGGTG
ACGATGACACGGCATTAAATGCGATCTCTTTAAGATGTAACAATGATGTT
GGCACTACCATCAAAAGTGGATACACCAATTGGGGAACTTGGCGAGCCGA
GTCACAAAAATGTATTAATGGATTTTACGGTGGAATGCTAAAAGATGAAA
GCTACCAGGTAATACACATTGGACTTCTGTAACTTATCTCATCTTTGAAG
AATCAAGAtatcattttaaggcttttaaatGTTCAGCAGTCAATAATTTC
GGTTTCCCAAGAGCCCAAGAAACCAAATTTACCCCTGTTTAAAAGTTCTT
CTTAGTGAGTTGTTATTTTCACAGTTGATATACCATTACACCTCCTCAAT
AAAGTTGATTACATAGATCCTTCTACTCTtcttatcaaaatatttattca
aatcCCAACCCCTCCCACGTGCTAAAATTACCTTGTAAGAAATAAATCTT
ATtttataatgaattttcaggggTCTGATGACGATACTTCGACCAATGCC
ATTCGTTTGATATGTCGAGATAACAATCAGTGGTACAAAAGCGGTGAAGG
TGGTTGGGGTTCATGGACACAAAGCACTTACTGTCCTGCTGGCTATAAAA
TTGTTGGTCTTCAAACACAGATCGAAAGTTACCAAGGGAGTGACGACGAT
ACTAGTTTAAATGGTGTTCGATTGTTGTGTCGATATTTTGGATAAGGCAA
TGGTGATACGGATAGTTGATAAAGGGGGTGTTTGTGCATTTTAACTAATA
CTAATTATTACGAATTGtatacttttttgttttcttttgttaattatGAA
TTGCatg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008948TCONS_00008948Clytia hemisphaericatranscript
TCONS_00008949TCONS_00008949Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008948-proteinTCONS_00008948-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000089supercontigsc0000089:64494..68600 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.34	4.93	3.38	3.04	1.12	0.53	0.71	0.45	1.3	1.35	1.55	0.81	5.3	1.86	22.87	42.52	1.37	1.02	0.83	0.85	0.39	0.48	1.48	0.94	0.25	0.63	0.14	0.27	0.43	0.37