XLOC_004925 (gene) - C. hemisphaerica

Overview


Name	XLOC_004925
Unique Name	XLOC_004925
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000087:498391..507999-

gene from alignment at sc0000087:498391..507999-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_004925 ID=XLOC_004925|Name=XLOC_004925|organism=Clytia hemisphaerica|type=gene|length=9609bp|location=Sequence derived from alignment at sc0000087:498391..507999- (Clytia hemisphaerica)
TTGACGGCAATTATCATGCTGCAGTTAAATATAGAGTTTACCTACTCCAC
AGTAGCAGCCATAGCAGAGGACATGCTCAATTCTTTCATTCCTAACATAA
AAGGAAAATTATACCTCTTTACCATATTGCCAGTTTTCTTCTCTGACTTT
ATCCTGCTGAACAAGCTATTTACGGTCAGTCGAAACTGCACNAAGCCATT
TATGGTCAGTCGGGTCCAGCTGTTCCACAAGCCGCATTCTGCAGTGCATT
CTGTGACAACATTGGACACAAATATAGCCGACTGTTTCAAGATGGTATTG
AAAACGAAAGTAGCTATGAAGGACAACGAGAAAAAAAAGCTCTACTTCTC
AGCTTCAAACGCACTCTGTTGTAGAGGCTTTTCTAGAAAATTACAAAAAC
GGCCGCTTTTTCAAAGACAGGAAGATCTCCGAGAGAGAACAAAACAAACG
TGGTTTCAAAAACGAAAGTAAAGATCACGAGGAGTCACGAAAGGCCAAGT
TTCGGAAGTTTCAAGTTTCAGTGCATGATCTTGCGCTTGTCCTGGGACTG
GGCAAGCTTATAAAAAATATTAACTTACACACAAAAATGATAACCTTTAT
CTGTTTATAGAAAACTAAACAATTTAGTGATGTCTTTCATACAATACTTT
ATAATTTTCATGGTCCTTGGATCTATTGTTGAATCAAGATACAGTGAAAG
CGGTTTTTACAAACAATCTTCAACAAAAGCTTTGAATTTCAATGATGGTA
AGACACTTTCTTCCTGGGATGTTGGCTTTGACTGTAAGATTAAAAATTTG
GCATATGAATATACCAAAAAACTTTCACCTGGAACAGGCAATGAAGTTGA
ACTTCAGCTGGTTTTTGATGCACTTGAGTTAGGTTCTGTCTGCAACAAAA
CAACAGTGTCTTCTGAAAAAGTTGATTACCCCTGGCAAAAGAATGACTTA
AAAGAAGAAGAAAAAGATGTGACAACTGTTTTTGTTGACAAATATCTTGG
AAGGAGTAGCCACAATGGAGCTATAAACAAGCCTCTGTCAGATATTCAAC
CAGGAATTGATTTATGCTCTTCTAAACTTCAAGCTTCCTCAACTTTGAAG
AAATGTATAGTTGCTGTGCGGTTTGGAACCTATGAGATTACAAAACCATT
AAAAATTTCCAGCAACATTGAAATAAAGAATTTCAAAGATGAGAAAGTGA
CAGTTTCTGGCTTTAAAACAGTAAAACCAAGTTGGAAAGCATTTAAACAA
AGAACCGACTTGTTTGAAAACTTTAATCCAATTTTTGAAGACATCTCACC
AAAAGAAAGTTTGAGAAATGTTGAATATCTCGGCGAGGTTGCAAACTCTG
AGGCATGTCAAAGTCTGTGTGTGAAGATGAGTAAATGTTCCTCTTTTGTT
TACTATCCAAGCTCTGTGAAGGGATTTGAAAACCAATGTTTTGTGAGAAT
TGATGGTGTTTGGAATCCTATCAAGACAGAAGGTGTACACAGTGGCAAAA
AGGTAGATATTATTAACAGTTAGGAACATTTGGCGAGTTCCTGTACGCAG
CCGCAATCAAAAAAATCATAACGTCACTCAATAAAAAATGGCGTTCGTGT
CTTTTCGCACTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAACACGCTTCGTTATGCG
CTGCGGTGGAGTGCATGACGTAACTCGCGCGGCAACTAACTCGCCTTCTG
TTGGAAGATCATATTGGGCGTTTTGGCGTTCCCACCCTCGACGCAGCGAG
CGCCTTTGTCTTTCCGCAACTCTTTCCACCATTTTAGATGGCCTTAACAA
TAGATCCAAAAGGGAGCCATAATCTTGGAAGATAATTTGTTTTGATCTCC
GGCTTTGGGAAGTAGCAATGTTTTTGGTTGTTTTCAATGGAAAACGGTAA
GAAAATGGTAAGAAACTTAAGTTTACAAGTGTCATTTAGTTTTTGCTGGC
TTATAGAATGGCAGGATCCTGGATGGTTTCCCTAACTGATTAAAAGCAAC
ATTCACCAACAATTTTAAACCCTCCCCCTCCATTGGATGTATGATAAGGC
TCTGGATAATCTAAATAGATGGATACAGTACTAAGTAATATAAAACTCCT
AAAACAGAGGAAAATGTACAAAAACATATACTAACAAAATAAGAACATGT
TAAGCAGTGTTAAGAATATTTTTAGGCTTGAAACTCAAAAAGTTAAGATC
AGCACAATAAAGAAAATACTCACTTAAGGATGAAAAAAAGAACATGCTTA
AGAACATTTTAGAGGCTTAAAAAACTTAAACTATCTTTAGTCAGCTTAAA
AAGTTTTGGATGTTTTTATAAAAAACCTGTATGTTAAAGAATTAAAAATT
GTTGTATATACAGCCTTAGGTATAGGTGAAGGCTTCTTCGTAAAAGCGAA
AGACATGTACCTATTTTTCGGATCCGGCATGCGGGAATAGTGTCAGGACC
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCTGTCGGTAAGT
CATTCAGTAAGTTAGAAAACATAGTAAATAACTCACACAGAACCAGAAAG
TCAGAAAAACTACGAACAAGAGACTGGAAAGTACGAAACAAGTCCAGATC
TGTCTTTCGTCTTTACGAAGAAGCCACGACCTTAGGTATATGCAAAATCC
TCATTGTATTTTCCAAAGAAAATCATCATTTTTATCAGACACAGAAAATA
GCTCCATTCAAGATCTTTTACTTGTTTTAAAAATCATTATGTTCAAGGAA
AACACTGCCATACTTTCAAAAGGAAAATCAGTATTATATACTGTATTTTC
AAAGTAAATCAGTTCTGTATTTCCACAGGAAAATCATTGATGTATTTTGG
AGAAGGTTTAATATTATTTTTCCAAGAAGAATCATCACTTTATCTGCCAA
AATCACTCCCTTGCACTTTGTCAATTTCTAAATCTGTTCAATCCGCAAAA
TAGAAGTGCTCTTGAAATTACATCATGGCAATTCGAATACAATTTTATAT
ACAGTACTTCAATCGTTATTTTAGCTATTATCCATTCTGCTTGAGTAACT
TGCTACATTGCATTGCAATTCATTTGATAAATAATAAAACAAAGGAATTA
TAGAATTTTTGATTTTCTAAGTGATTTGATAAATGATTAAGCCTTAATTG
ATTTTAAATTTAGGTCAACATATTTTCTGCAAATCTTGCTGAGGAAAATA
TTGACAAAGTAGATCAAGTCTTTGCATATGGTGGGCGTCTCGTTAGAGCA
AGGTTCCCAAATGCTGATCCTGTTGTTCAAGGTTTGCACACCACACCAAC
TGGATGGGTACCCAAAGCTGACAAATGGCTGCCCCCTAAGCAGTTTGATG
ATGCACTTGAAATTCACTTAGCATCACCTACAAGAAATGGTTCATTATTT
CCTGGCTTTCAAATCGGAATTGGTGGCTCTGTCAGTCAATTTGACCCACC
AAGGTCTTACTGGGGTACAAAACATCCTTTCGGAGGAGGTGGTTCCACCT
ACACTGTACCGTCAGGTCTTCAATATTCCGAGGATTTGGAAATTAATGGT
AGACACTGGAAAACACCTGGAACAGGAATTGTACATGCTTTTCAAAACCT
TCATTGGGAAAACTGGATTTACAAACTTGACAATCGAGATGAGGTAAATA
TTTATTTTGAAAAAACTGCTTAATTGAGATTTGTTGGTATTTAGTATTCT
GTAACGACTGTGAATGTAACTGTACAGTAACTGCACAATGTCATATGAAT
GAAAGTAAAAAAGCAGTAAGTCAATTTTCCTCAGTTAGAGATAAAGCCCA
GAGAGAAAAAGCCACATGTCACAAAATTGACTTCTCTTTTGATTTAAACA
TTTTTTTGAACAGGCTATTGACAGGACTAAGCAATCCTAGGTAAAATTGA
GCAAATTCCAAAAAAGTCCATATATAATGAACTGCTTTTGACATACCACT
ATTTAGCTCCAAAAATTGAAGAAAAAAAAACGATAAAATTCTGAATATGA
TTTTATTTGTAACTCAATTTTTTCGAAAAAAAAGGCCTTTAGGGTTTTCC
TGCCTTCACGCTACGAACTGTAAATGATTTAAAAAACCTGACTTGAATTA
AAGCACCGAAGTATTACCATCTTAACTGTTTCTCAGGAAAGTCGTACTTT
CACTTGGACATGGGGAGGTTTTCAAGGAGGCAGAGGTTCAAAGAGCGGCG
GTGAATGGTACGTTGAAAATATTTTCGAAGAACTTGATGTTGCAAATGAG
TGGTATTTTAATGAATCGCAGAAGATTTTGTATCTAATGCCAAACTCCAG
TGAAGGAAGCAATGGATTACCAGAAGAGGTATCATAATATTCTATGTTTT
AATAAATATTTTCAATTCTTTATAAAGGTTGAACAATGGAATATTTAGCA
GTGCTCAAAGAAATTCTTCTATTAGAAATTCGATAATTTTAACCAAATTA
TATGTACAAAATGATTTTGCATACGAATAAGATGTTTTGATTTAGCAAGA
ATGGCTCCAATAAGAATTATGAAAATTAAAAATAATAAAAGTTAAAAATT
GAATAATTTTAAAATTTTCTGTCTTAATGCTAGATTCAAATTCCAATGGT
AACGACTTTAGGATACATCGTTGGTTCTCAAGATAAGCCTGTTGAGAACA
TTACCATTAGTGGGATGACCTTGATGGGAACACAAACAACTTTCTTGGAG
AAATACATGGTGCCAAGTGGTGGAGATTGGACTGTTCATCGTGGTGGAGT
GTTGTACATTGAAGGCTCTGTAAACACACTTATTGAAGGTTGCACATTTC
ATTCTCCTGGTGGAAATGGTATTTTCGCTTAGTAAGGCATTGTGTTTATT
CTTTGTTCGATATATTGCTAACTAGCTTTAATTGGCTAGTCACCGTTCTA
GCTATTTTAAAGCAATTTTAGTTGCAGGAATAAAAGCTAATTATAAAAAG
GTAGAATATATTTGTTGAGTTTTACGGCTATAATATAATATATAATATAT
CAATTTTTATATCTGGTTCTTTTAATTATATAATAGCCAATACAACAGAA
ACTTGGTGATATCCCACAACACAATGTTCCGACTTGGAGATAACGGTATT
GTTCTTGTGGGTGAGTCCAGGCTAATGGATGGTAGTGTTGGGAATCAGCC
TAGAGGAACACAAATCCTTTACAACATAATCAGCGAAAATGGAATCTGGG
GGAAACAGGTAAAGTAATGCTTGAATAAGGTTTATTTATGATAATCAGTG
ATAATAAGTGTTTTCAGGTACTTTCATATGTCTGTGTCTTGCCTGAAGCT
TGCTTATACTAGGGTCCAGGGCTACGCAACTTGATCAAAGAAATCTTTCA
GATCTGCCACAATCAATGAGTAAATAATGTGTTAGAATTCTTTTGAACAC
GCAAGCATTATCAAGCCATCTAGATATCGTCACACCTTACCACATCCTTT
TTAGACGTATCCATTCGTTCAGTCAGTAGCATGTCAAACGCATTTGGAAG
GAAACATCTTTTTCAGTGGTCCAAGAGCTGGCTTGAATTTCAATGACGGA
TTTGGTGGTGGGAATAGTGTACAATCGAATCTGTTGTTCAATTTTGTGAG
AGGTAGTTCATTTAGGTCCTAAAAGACACCTTTTATTTTATATAACTTAC
CACAACCTCCCTAAATCTTTAGAGAGAATAAAGATATGGAACCTCTAAAG
TCTATTTATTTTCAAATCTGGTAGCACTATTTCAAAAATTATTGGTTGAA
TTCTAGTTGAAAAAAAAGCCAGCCTACAAGCTCTAAGTCTTCCGTCGACC
TTTTTGCTCTTAATTAAATTTGTTTCCATAGAAACGGATGATCATGGACC
AATCAACACATGGGATCGAGTTCCTTACTTAACACGAGTTGCCAATGGAT
CTACCGTCTCGTTAAATGTGAAAGAAAACACAATTTACAACAACTTCATT
ATTAATAATTATCGTTCTGTATGGCCTATTGATCATGATGATGGCACATG
TTTTTGGAGAGATACCAAAAACTTTCTCGTCTATGGTGGTATGATTAAGT
TTTATCTCTTCCCTAGCTCCTTCTTTCTTAAAGCTACTTGGGCGATGGAT
TTGAGTTAACCCTGGCTAACCTTTTTGGTTTTTCGATACTCAAAACGTTA
CTTTTCTCTCGACTTTACAGGAGAAGGGGTCAAGCAACTAGCGAGTACCA
CACCAAAAACCGGGAATTTTATTCCTTTTACAAAAAGATTCATACAAATT
CAAGTGCTTTGACGCAAATTCTACTTTTTTCAAAGTTCAAAGAGACGTCA
AAAATCGTTTGTTTTGAGCCTGGAAACGTTCGAAAACGTGGAATAGTCGT
TACTACGCAGAAATAAAGATGTGATATTTAGACTAGTCAAACTATTCAAT
CAAATTTTCAATTTTCTTTCCCATAGGCNACGGAGCCTGATTTTCGAAAA
ACATTTTTTTATTCGAACAAATTTTCAATTTTTTTCTCCATAGGTTTTAA
GAATTACTTAGGACACAACAAAATATCTCAAGATAATGTTTATGTTTATC
CTGACCGACATCCAGCCAAGGAAGCTTTCAGTAAACTCTTCTGTGCTGAT
ACACAAGGTCAAACGTTAGGTATAAACGATTGTTTATTTTATATGAGGTC
CCTGTCCCATATAATGTATTTGATGTCATTTTAATTTCTCAACAGAACTC
TTGATATTTGAGCGCATCCCAAAAATAAATTCAAATTAGCCACTTGTTTA
TTCACATAAAAACTTATGAGAAATTTATTCCGTTCTTTTTTGGGAATCGG
ACTGTTGACTGTTGGGGGTGGTCAAACCTTTGAAAAATAAAAATAATTCT
TAAAAATATCTAGATACCTCCTGGAATAATTGCAAAATTTCCAAAAAACC
TTTAAAAATTCTTTTTAAAGCGAGGGTGAACGAACTAGAATTAGTCTTTT
TTTCCCCCTGGAAGTTTTAGAATAACTATAACCCCCTGGAAAAACAAATT
AGGTCGGAAAATTCTTAAGAGATTTTATTTCACTCCATGGAAAAATGAAA
ACACTTCCATTAGACCCCATAAAAATTCTTCTTGAATGACTCCCTAGATC
TATGTTCTTTCACCTTCATGTATGGATATATAGAATGGCTCATTTTTGTA
TAAAGATGACTTTATGAATCAAGAATTTCAAGTCTCTTCGAAGGAATTTC
TGGGTACAGTGAACAAAAATTATCCAATAGTCTCTTTAAATGGACTGTAA
TCAAGGTCCGATCTTTTTGGAAATTTTTTCATAAAAGATGGCTAGATGAA
TATCAGAATTTCAGGGTTTAATAAGAATTTTTTTTATCTCTTCAAAGGAA
CTTCTGGGTACGGTGACGTTTATCAGAATAACAAATGCGTGATCGGTATT
CAGAATATTTATTCTCTTGGTAAATGTGATATCAACCATATTGATATGAC
TATTCCACATTTTGTTAACAATCAACTCTACACACCTGATGGTACTGTTA
TCATTCAATGTGGTTCCAACCAATGGAATATAACACAAGCTCAAGCACAT
GGGATAGATGTTGGAAGCAAAGTAGATAAATTACCGAATGATGATTATAT
TATTCAGTGGGGAAAAGATTTATTTGGCCTGTAGAAAAAATCAAACAAGT
TTTTTTTGATTTTTTTAAAAAGGATTTTGGCTACTGGAAAGAGATTTTTT
TGAAATTGTAAATATTTTTTAATAAATTGATTTTTCAATTTGAATTTTGA
TAATTTTGTAATGATTCAAGTAATTCAAAGGAATTTTTAGTCACCATACC
TTTAAGATGTGAATGTATATTTTTTGTAATTCTTATAATTCTTATTAATG
ACATTTTATATACGATAATGGTCGCTTACCCAAAAACCCTTCCTACAGGT
ACACTTGTAACATTTTAAAATTAGTAAGAAAATACAATGACAAAAAACAC
AATGACAAAAAACTGGGCACAGTTTAGGCATGAGACCTATGAAATTGCAC
AAAGTGTCTTGGATTGAGAAAAGTGTAGGGTATTTTTATAAGAATTCATT
TGCAAGGAT

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00008789	TCONS_00008789	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00008789-protein	TCONS_00008789-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000087	supercontig	sc0000087:498391..507999 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.33	4.96	2.53	2.39	34.97	25.48	21	22.05	17.97	18.93	16.75	13.83	14.16	13.38	25.83	26.65	22.44	20.63	12.51	15.77	16.48	16.46	19.5	23.19	20.67	22.26	9.3	7.79	47.18	42.03

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XLOC_004925 (gene) - C. hemisphaerica