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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00008789-protein ID=TCONS_00008789-protein|Name=TCONS_00008789-protein|organism=Clytia hemisphaerica|type=polypeptide|length=910bp
MSFIQYFIIFMVLGSIVESRYSESGFYKQSSTKALNFNDGKTLSSWDVGF
DCKIKNLAYEYTKKLSPGTGNEVELQLVFDALELGSVCNKTTVSSEKVDY
PWQKNDLKEEEKDVTTVFVDKYLGRSSHNGAINKPLSDIQPGIDLCSSKL
QASSTLKKCIVAVRFGTYEITKPLKISSNIEIKNFKDEKVTVSGFKTVKP
SWKAFKQRTDLFENFNPIFEDISPKESLRNVEYLGEVANSEACQSLCVKM
SKCSSFVYYPSSVKGFENQCFVRIDGVWNPIKTEGVHSGKKVNIFSANLA
EENIDKVDQVFAYGGRLVRARFPNADPVVQGLHTTPTGWVPKADKWLPPK
QFDDALEIHLASPTRNGSLFPGFQIGIGGSVSQFDPPRSYWGTKHPFGGG
GSTYTVPSGLQYSEDLEINGRHWKTPGTGIVHAFQNLHWENWIYKLDNRD
EESRTFTWTWGGFQGGRGSKSGGEWYVENIFEELDVANEWYFNESQKILY
LMPNSSEGSNGLPEEIQIPMVTTLGYIVGSQDKPVENITISGMTLMGTQT
TFLEKYMVPSGGDWTVHRGGVLYIEGSVNTLIEGCTFHSPGGNGIFAYQY
NRNLVISHNTMFRLGDNGIVLVGESRLMDGSVGNQPRGTQILYNIISENG
IWGKQTYPFVQSVACQTHLEGNIFFSGPRAGLNFNDGFGGGNSVQSNLLF
NFVRETDDHGPINTWDRVPYLTRVANGSTVSLNVKENTIYNNFIINNYRS
VWPIDHDDGTCFWRDTKNFLVYGGFKNYLGHNKISQDNVYVYPDRHPAKE
AFSKLFCADTQGQTLGTSGYGDVYQNNKCVIGIQNIYSLGKCDINHIDMT
IPHFVNNQLYTPDGTVIIQCGSNQWNITQAQAHGIDVGSKVDKLPNDDYI
IQWGKDLFGL Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR006626 | Parallel beta-helix repeat | SMART | SM00710 | pbh1 | coord: 664..686
e-value: 7800.0
score: 0.8
coord: 601..623
e-value: 74.0
score: 12.2
coord: 734..755
e-value: 8400.0
score: 0.6
coord: 577..599
e-value: 1.0
score: 18.4 |
| IPR012334 | Pectin lyase fold | GENE3D | 2.160.20.10 | | coord: 115..882
e-value: 9.4E-26
score: 90.4 |
| None | No IPR available | PFAM | PF13229 | Beta_helix | coord: 571..697
e-value: 1.9E-9
score: 37.5 |
| IPR011050 | Pectin lyase fold/virulence factor | SUPERFAMILY | 51126 | Pectin lyase-like | coord: 537..834
coord: 159..203 |
Blast
The following BLAST results are available for this feature:
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