XLOC_004917 (gene) - C. hemisphaerica

Overview
NameXLOC_004917
Unique NameXLOC_004917
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000087:265672..268093-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004917 ID=XLOC_004917|Name=XLOC_004917|organism=Clytia hemisphaerica|type=gene|length=2422bp|location=Sequence derived from alignment at sc0000087:265672..268093- (Clytia hemisphaerica)
CACACATGAATTATTTTCATGCTATAAAAAAATGCTTTCTGAACAGAAAA
GTAGACTCGTTTGATTTTTACTGCTGGATGAAAAATGTGACAATGTTTAA
TGATAAATGTTAGAAAATTTGGAAGATTGATACTTAAAACTTTGATGGTA
ATGTTATACTACAAACTAATGGAGTATTTATCACTAATGATAATTAAACT
AAACTTATCATAATTATGGAATCTCATCAAGACAACTTTCCAAAAGAAAA
TCAATACAAGCCAACCACAATCTGCACAATCACAACAAGTGAAGAAAAAT
CTTACGGAGCAAGCAAAATTGTGAAAAAAGAAGAAATAATTACGTTGGAT
GAAAATAATAACAATCAAGCAGAATCGAATGATGAAATTGATGCATCTAA
AACTTTCCACAATTATCATCATACAAATTATAGTGATCATTACCCAATGG
TAAAACGAGGGTATTCTGCAACCAAAGACGTGTACCCACATGAAGATTTT
AAAACAGGACCTGTATCACCTAACAGTACACCTTTTGTTACCCCTTCTGA
CCGCCTGGCAAGGGAAGCGGACTACATGTTTAACAATCGTTATGCACTGC
CACCATACCACCCACATGCGCCACCATATTTACCTCATCATGGATATATA
GGATTGCAGCAAACTACACCTGAAAATCAGGGTAAAAATGAAATTTAAAT
ATGAAATGTTAGTTGATCTATTGATTAAAATGAGCCTGTGGTTTTTGGGA
ATTTTTTGGAATTTTCTTCAGTGTTTCATCATTTTGATGATCTTATGGCT
AATTATATTTTTTAGGGTTTCTGGCATTTTTATTTTTTATTTTCAAGATT
TTGGAAGATTTTCTAAGATTTTTGGAATCCTTTTGAGATTTAATTATTTC
AGATTATTTAAAAAGTTAATTATTCGGACTTTCCAATTTTCCTCTTTTTT
TTAAAAAATTTTCTAAGATTTTCAAGAAAGGGAAAAATCCCTTTATTGAG
AAGAATTGAGAAAAATAACTTCTTGTATCATAGATTTTTTTCTTTTAACC
AAAAAGCCTCAGAAAGTCCAATGACCTCCAAGGAACGCTAAATAGAATTG
AAAAACTTTATCTGAACTTCCATATCTCAAATTCATAAAAATAATTTTCT
ATTCTTCGAATTTTCAGGTTCAACCGAAAATCATCCAAATCCATTCGTCT
CTTCAATGGATCATCAATATCTACCCCCTATCCAGCAATTGGATGGTGGT
ACACTTCACATACCACAAGGCTTCAGCCATGCATATCAATGGAAACATAT
GATGGCCAATCAGAACTCACCACCATCACCTATTGTTTCTCCTAGCAACG
AGATGCCACCATCTTGGAATAAACATGTTTACGCTACCAACGGTGTTAGC
TCTCCTACAGAAACGAGCACAAATAATGTGACTACCAATAGCCCTACACC
AACAATGATAAATGCCGCTAAAGGTTTTTTTAAAATATTACCAAAAATAT
TATGTGAAACACGTTTGTTGTTTTCAAGAAAGATCTAAAAAGTCAAGGAA
TAATAGAAATTCATCCTGAAAAGAAATGTAACTAATACCTGGAAAGCTTT
TCTATGCGCAGATTTTCTCTTGAAAAATCTTTAAATTGTATTTCTTTTCT
TTTTCAGATGGCTTGACTTTACTGGATTCTAACGGACATCGGCGTAAACG
AACAGCTTATTCACGAGCACAACTTGCACAACTTGAAGCACAATTTATAG
AAAGCCATTTCTTAACTAGAGAACGTCGATGTGAATTATCCAATTGTCTT
GGACTAAGTGAGCGACAAGTCAAAATCTGGTTTCAAAATCGGCGAATGAA
AGCTAAAAGGAAATCCATGAGTTTATCGTCACCACCCCCTGGTTTTGGTG
CATATCACATAGTTCGTTTACCCCCTGGAATGATTCCTGGTCACCACCCA
ATGGTCAACGTAAACGGACCTTTTATTCGTCCAGTTTTTCAACCAATCAA
AACTGAGCCTGAAACAATGGATTCACCACCTTTGATGACGTCAGCTTTTC
GTCGAAAAAGTGTCGGTGATGTGCCGACTATGATGCAACCGAGCCGACTC
TTTCATCCACGACCGACTTTTTTTAACGACAGAGATTTTTTTAAGAGTTC
CGAACGTGAGTATTATCGCAAATTGAGTCCAGTCGAAACGGAAGATCCTC
AAGTGAACTTGAAAGCCTCAGAAGATCAACAAGAAGACGAGTAAGAAAGA
AAAACTTTCTCAAAACCTTTTTTAATATTTTGAAACACAGGCACCTCTTT
TTGCAAATTTGATGTTTTTTTAGTCCAGAGAGTTTATTTTTGTAAATAGT
CTAAACCGTTTTGAAAATTTAATGACTTATTCATTTCCGAGCGGAATTTC
GGATGAAATAATATTACTTGCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008773TCONS_00008773Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
Hox9-14B homeodomain transcription factor proteinTCONS_00008773-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000087supercontigsc0000087:265672..268093 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
28.08	25.5	7.18	3.19	57.68	44.73	50.33	54.54	13.7	21.87	11.51	8.35	0.02	0.05	0.12	0.03	0.21	0.35	0.05	0	0.94	1.26	32.6	28.82	0	0	1.65	3.37	25.71	31.57