XLOC_004707 (gene) - C. hemisphaerica

Overview
NameXLOC_004707
Unique NameXLOC_004707
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000085:73734..77761+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004707 ID=XLOC_004707|Name=XLOC_004707|organism=Clytia hemisphaerica|type=gene|length=4028bp|location=Sequence derived from alignment at sc0000085:73734..77761+ (Clytia hemisphaerica)
GGTGAAAGAATAACATTATGAGAACTTCTCAaagtttattttgaccgtac
ACACTCTTGACTTTTGAGCAAAGCAATAGTCTAGTGAGcacctacatgtt
tttttttataagcaagtgtctgcccctacatcaggctcgcattatgctta
gcattctattgttctcaaacaatagagcaaTTGTTTAGGTATCCAAAACc
tgcgtatgcttataaacgttatgcttataaaagaaaaaacatgttctcag
tttttaattaattttgtcaTCGTACAAGTCTAGCTTTAAATGAGCAATAG
TTCGAAATAAAACAATAATCTCAATCTCAAACTAAACCACATAGAATTCC
AACATCGATTTAACATTAAGAGGTATTTCATAATCAAAATCTTTCTTCTA
ATTCGAAACAGTACAAAGTAAATGAAAGGTCTGAGTGGGccgagaaattt
ttcaaagtcatAATTAAAAGCCGGGGGAAATTTTCAAAGACTTAATTAGG
GCAAGAGGGCTTTAAGATATCGGAGGATATGCCCGTATTCAAGGAAGTTG
ACAGTAGTTGTAATTTAACCTTTGTTCACATGCCAACATGTTAGCGGAAG
TATTTTGTGGTACGGTAATTAAATACCGGAAGCGATCTTCAGCAATTTGA
TGATAAATTCTCTGCTACACATCATTTTGAATGAACTTTTAAAGTCAATG
AAAACAATAAGGGAATATTTATTTCTGGTCTTGAAAGTTGAATTTAGTTT
AGNATGAAAACAATAAGGGAATATTTCATTCTGGTCTTGAAAGTTGAATT
TAGTTTAGAATCAAGGACGAGTTCATTTCTAAAGAAAACAACTGGGTCAG
ACAATACCGTGAGATGAGATTAGAAACCGATCGAGCGAACAAACCAAGTG
AACACAAACAcaatgaaagaaaagaaataacaTTATGACAAAACAAAATA
TCACATATCCTGTCTTTAACCAAATAAGGATGAAATGTTTATTGAATTAC
ATAGCCAGAAGAAAATATCGATGTTTGGTCATCTCTGTTTAAACTTAGAT
GGATGGATGTCAATTCTCGTCATTGATTGGCTTaaacttggtcacatgac
taaACGCTCCTATGATTGTCTCAAATTCTCATATAAAAGCAGTTACAGAA
TTTCGAAGAGAACGAAACTTGAGAGAACCTGAAACTTCAATAAAAACTTT
CAAGTAAGgtgataaatttttgaaatcagaaTGGAACACAGACACAAGGG
GTTTGGATTTACCGCTGAGACAAAGAGAGCTGTAAGTAAAAGTCATTCAT
TTCcagcaacttttttttaattaaacatCACTCATTTATATTCACTTTCA
CATGGGTAAATGAGGCAAGGTTTTGCTTCAATCCAGGGACGTAGCCTGAG
TTGAGAATGTTCTACATACAGTCTATAAGTAACGTATTTTAatgggtttt
gtttttgaagcaTCCGATATTACTGGATGTTTTCACAGCCAAGGTCTCAT
CAAAGCAAAGTCTTTTATGGGAGCACTGAGACATTCAACTCACGTCACTT
GATTTGAACATCGGAATTTACCTGCATAAGGAGCTTAGAATTCTTGGAAG
GAATTACAGTACACGATATGGAGAATCGTTTCAATACTTTTCGCTTTACA
TTTGCGTTTTCCACACCTTATCTGTATCCAAACAGCAACATGATTTTTTA
CCAAATAAGTCGAAGGAAAGGATCTTGCTTATGCAACGGATATCAGAGTT
AATTTTGTCAACATTTAAATGATCTCCGTCTCATCTTATagcaaatattt
tatttgattgGTATTTGCATGTTTGCATAACTCTGTGAGTGATACTTTTC
GGATGAAAGATTCACAAATTCCTAAACTAAAATAGAAGGTGATGGTTGTA
ACATAGGAAAATCCTATGCAGAAAGCAACCAATAAGAAACTTTCCTTGGC
TTAAGCTAGCTGAAGCTAAAGTAGCCCTTGTCTTGATGCATTTTCCACTA
GTCATTATAAATCCCAgtaaatttcttcatttttagatcGACAGCAAATA
CGACATCGAGAGCGAACGTGAAGCTTTAGAATGGATTGATGCTGTTTTAG
GAGGAAACTCTGGATTGAAAGGAGTCACAGGGAAAGATAATGTTCAACAA
GCTCTTGCTAACGGAATCATCCTCTGCAAGTAAgccattctttttttata
tttatgcaCCTTTGAGGACGGTGGAGTAACTGAAGCGTTTTGTAATATAA
TTgacagttttgacccgcaaaaaatcgaggacggtaaaattTACTAAGAT
CAAGACAAATCAGAAAGAAGCTCATCGTATCCGTCGCAGAAACACACAGA
TTTATTAACTGGTTGAAGTAAAAGCCGGTCAATACAAGAAAATGcgctat
tttgattggttctctAGCGGTCAATATAGTACGGTAAAGACCACTTCAGT
GCTATGGTCAAACTGACGatgattttaaaaagagaaaGCTCGGTCTGTAC
TTCGACTGCGGTCAATATTTTACTGTATTGACCTCCAAACCagttattat
tgtattaatatAAACTCTCTACATTCACCTTTAAAGCAGTCTCTTAGTTC
AACGTCTAATTTGTTACTTTTGAGAAACTCCAAAAACTAATGACTTTTAG
ACATAAGTGGTTGTTAGACAGGGGTGGGTGTATTTTGAGTATTATCCGCC
ATCAAAGCTCTACGTAATCCTCAGAACTCTTAGTTCCATCACCAACGAca
ttggttgaaatttaatCCAGAAATATATAGAAATATCAGCACGAGTTTAA
AAATGACCATAATTGATTTATTCTATTTCTAGTCTAATGAACGCTATCAA
CCCTGGAGCAGTCAAGAAAGTCCATCCAGAAAatgcaaacaaatttaaac
atGTAAGTTATTTATATGACAAGCTACTTCTATTCGTGTTTCTTGCATTG
GAGGATGAAGATGATGCATTTGACGGATGAAAATTAACTCAAAATAGAAA
CGTGTGTATATGGAAATTTAAGTGAGGTCCTGTTGAAGGCAGATCATTAC
TTTCTCGAAGAAAGAGTTATTCTCAAGGAGATTCACACAATATGGAAAGA
ATTCCAGAAAGCTTGAACTCctgaaactttcttttacaGCAAGAAAACGT
GCACAACTTTTTGGTGGGAAGCGAGGCATACGGATGCCATAGAGGCGATA
TTTTCCAAACAGTCGATCTGACGGAAGACCGAAACATGCCAGCCGTCATC
AAAGGAATTCATACTCTCGGAAGAACCGTAAGaaaatttattctttttat
tCTGATTTGCAAACCTGGATGAGACCTTAGATGATGAGCGGTGACTGAAG
CTCTATAATACTTTCAGAGTACTTTCAAATTTTGTCAACCCAACAAAATA
CTTTCACTTGAGTTAGAGGCCAACTAGGCCAAAAATTAACCTTCTGTAGT
TTGTGAAAGTCCACCAGtggaaaaataatttcgaaTTAAGGCGTTAAGTG
ACTACTTCTAAAGTACTTAACTTTCACTGAAAGCAAAAGAAAGTCACCGA
AACGATTAAACGCTCAATCAACATACCAGTGTAGATTTATTTACAAACCA
GTAGAATTGATCTTTGTGGTTTCGGTCAATAAAATGTTACCCAATGCATA
TCTTTTGGAAGAGAAAAGTTGAAGGGAATTTTATTAATAGTCATATTTTC
AATTTACAGGCACAAAAGAACAACTTTAGCGGACCAACCATTGGCCCGAA
AGTGTCAACACCCAACAAACGTGAATTCTCCGAGGAGCAAATGAGACATG
GCCGTGTCCATGGAATTTAAAGACCTGACATCAAAGCTCTCTTCGAGAAC
ATCGGGCGGACATTATTGTCCGCACCAGAAGTGATATCTCTCCGCGCGGT
AGAGCCAATATCATCTGTACATTTTGACCATTCTTATACATACAACATCC
TAATTTgtaaatattaaaaacattttttttgttctaAGTTAAATAGAATT
TTTACCACCATTGAAAAGGATATGTATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008379TCONS_00008379Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008379-proteinTCONS_00008379-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000085supercontigsc0000085:73734..77761 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.14	0.06	0.14	0.17	13.82	11.98	5.52	5.06	1.82	2.6	1	0.34	159.78	67.33	6.76	7.67	70.98	89.5	172.66	243.71	11.52	14.25	7.93	4.95	2.47	3.41	1.41	2.01	54.81	65.47