XLOC_004569 (gene) - C. hemisphaerica

Overview
NameXLOC_004569
Unique NameXLOC_004569
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000082:14788..19143+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004569 ID=XLOC_004569|Name=XLOC_004569|organism=Clytia hemisphaerica|type=gene|length=4356bp|location=Sequence derived from alignment at sc0000082:14788..19143+ (Clytia hemisphaerica)
GCTTTAGTCACCATAAAATATGTCTGCATCGAGTCAACGCGTTCTAGTTC
TTGCCAACCTCATCACTTCTTTGATACGTCATTCCACTGAATAATTAGGG
TAgaagaattgtcattttgaTGACGGTGTTCATTGTCAGCGTATCATCAT
CATATTTCAACTGCTGTTTgaatatttgatgaaattttcaagtcaCAATC
TCTTATGATTCAAAAACACAGCATTTTCTACCATAATTTCTACCTCAACT
TTAATCTAAAATAGATCTGCATTTTCCTCCTATTTTGTTTTCCCTTCAGA
ATGTATTTTCCTACCCTGGTTCATTACATTACGCACCAATTACATGATAG
AACCATTTCGAAGGCTTATCTAATGGAATTCAAATTAATCACATTAATAC
GTTAATTCCTTTTATGGAGGATTGCCGTTTATGTCGTAGTTAAGTGCATC
ATTCTAAATCTGTTTgttatgtattttacagaactaTAAAAAATAATTGC
ACAATTATTACACAAGTTGCCATATAGACAGTTTAGAAACAAATCTTAGA
ACATTTCCCATATAAACGATATAAAGAAGATCGTAATTAAACCAAAGTCA
GTCTATTTGAACGAAGCTCAAGATGAAACATTCATTTTTCATAGCCATTG
CTGTCATCTTGTTGGTGCAATGTTTGTCGAACGTGTGCTCCAAGCCAATG
TGTAAGTTCATTTATCTCTTAAACATAGCATGGTTCATACCTACGAATTC
GACTGTGGAATACCGTTTAGGCCCTTTGAGTGGACAGTACAAGCGTAAAA
AGGCCCCCCACGCGGTTggtgtgatggcgtgatggagggttttttgtggc
gtgatggcgtgaaattttgaaaaaaaaacggtgtgatggcgtgaaaatga
agtgccagcgtgatcgtgaaatcgagtttttttaggccTGATGGTGTGAA
ATTTGCAGTTAAGCGTggtcgtgaaaattatatttattacttgaatcgta
attctatgtccattttagccaatttagagggttttaatttcaaagttttc
ttgTTCGGCCCCAACTATGGCCTCCTATAGATctatttttaaaacataaa
agaaacggtgcaaatAGTTTTATTCATCagccatttatccttgtaacttc
caattgtctttatcagttgctagctagtcttcaaaatataaagtcgaatg
ctatgagatggtcaaaaattgaaatttctcccgtcggcacaAACTATACC
TGCTcttcctccgtaactaacatttccctctctttcttagatgccTATTC
TTAGAAGCATCAAAGACATCAGGTCCTTTATTTCAAGATAATCTATATTT
GTAGCAAAGCCTTAAACAGAAATAAGCAACAGCTTTATCATGAGGTGTAA
TTCTGGGCAGATTGgcattgatcaaaggaatcctgtgatgtttaaaccat
attttggaaaaaagagagtaaaatGAGGGCGATTgtagccatactaaatt
gaaaatttctcccgtcagcgcaaaccatggttgcgcctcctcgtttccct
tttgaaaactattcacgctaattcacaattaatgcccatgggtCCCGTCA
ACGGGGGGAGAGGGGCATGGCCCTCATGTTACCAAAAACACTatttgtac
ttttaaaagatatccattatttttacatgaattatttttcaaattgaatt
aaataaatgggtcctaaaatagcaccttgaacccttcaaaattctaaaat
tttctccgttgcccaaccatggtgggctttgtcaatttactcaaatatac
ctcagccctcaaaccAGGGCCTTTTGATGTGATCCACCAGTTGTGAAACA
ATTTTTCATATGCATAAgttaagattacgtcatttttcctatcggaaaca
cccgaaaaaactggaatttgaccGCTTTGTATTACTACGTgatcaagaaa
atcaaatttttcaggcgtgatggcgtgaaatcgaaaaaaaagtggcgtga
tggcgtgaaatcgaaaaaaaagtggcgtgatggcgtgaaatcgaaaaaaa
agtggcgtgatggcgtgaaatcgaaaaaaaagtggcgtgatggcgtgaaa
tcgaaaaaaaagtggcgtgatggcgtgaaatcgaaaaaaaagtggcgtga
tggcgtgaaatcgaaaaaaaagtggcgtgatggcgtgaaatcgaaaaaaa
agtggcgtgatggcgtgaaatcgaaaaaaaagtggcgtgatggcgtgaaa
tcgaaaaaaaagtggcgtgatggcgtgaaatcgaaaaaaaagtggcgtga
tggcgtgaaatcgaaaaaaaagtggcgtgatggcgtgaaatcgaaaaaaa
agtggcgggatggcgtgaattttgggtccgctgggggggggggctcgtaA
AAGGCGCTTAAGTCAAAGTTTTTATGATACAATGCAATTTTATGGAGAAA
TGCCTAATGTGGAAAACGGGAAAGATTAACTAATTAGGTCGATAATGTTT
GTAAATATCATAaccaatatttattttttcttttgacagaTGGCCACTCC
GACGACAAGAGATATTGTGCTTTGCTGAGTAATAATTGTAAACTTGGCGC
CCCAATAGCCTGTGATATCACAGGAGAAACGTACGATAATATTTGTGATT
ACATGATGCAAATGTGTTTGGCGGGAGCCAAGAATTTCCCACCCTTGGTA
GCGTGTGGGGTaagttttaaattatttttttcttgcctccaaaaaaagat
ttgttCCGAATTTTAAGCGTAATTGTATTCTGTTGCTATACACTAAAATC
AAAagataaatttctttttaatttgcaATCCTAtaatttcgttttctttt
tttatttagaaaaagcAACAGCGTCACAGGTATTAAAATGTTTTCTGTGT
CAAACAATTGATAAGTGAACTCAATGATAATCATGCACAGGTTCGATGCA
ATACTATTGGATGTTTGGATGACGCTCTCAACTCGAATCAATTCGACTTC
GAATCACAAAATATTCCCGAAAACGTTTTGAATCAAGATTGATAAATCAT
CAAAGATTAATACCAAGGGCATCAAGAAGCACTTATGGCTTGTTAAATAA
AGATACAATATCTTGAAATTGTTTcattatttcatttgaaaaatattatc
tgtattaaatattaaatttctCCTAAATAGTATATACATTGTATAAGAGT
TTATGTACATAAAAATCTCACAAAATATTTATCATATTgtcattttttct
ataaaatagtCAAACTATATACTTctgttttttaattattcaagtTTAAT
ATTGTATGctacaaaatgttaaaatatgcTCATCATTAAAATTCAGATTT
GAAAGATTGAACATGCCTAAACCTTTATAGCttcaatttcgaaaaaaaaa
cctCCGGGCTTTAGTATATTCCAGAAAGATCATGtaaattgagacagggg
tgcttACGTAAAGTAACAAACGTCTAAACAAGTTATATTCTCTCGTCTGT
CACAACAGAGCCTCTTTGACGtaacttttgtaaaatatttgaATGAAATA
CCATTGTCAGTTTTATTAGAACAGTCAATtggtttgtgaaaaaaaattat
gatctCAACTTTAAAGCATCTGTGTGATCTGAAATCCTATTCATCTATTT
TAGTATTTTGTCCACAAGGCGAATTCCTTCTTCTTTGAGCCATTAATGTC
ACTTTGGATATTTGAAAGTTATGATTATCTTGCTTTTACTAGGGAATTTG
AATTGTATTGTTCACTGCCACCAAAACATCCTTCCAGTTGGATAAAAGAT
TAAACCCAAAGCTTTTTCCCATCGATGATGTAAGTTCTTCTTTCTTATCG
GCATGCAAATTTCTGACCAATTTTTCCGTTAAGAAAGACAGTCTCACCGA
ACATAGAGATTTTGTCTAAGATTGCTGTTCTCACGAAGAGACTGACGGGA
CTTGATCCTTCAATCCATGATGTACTCAATAACGTCACTTCCTTATGTCT
TGCATCAATGCAAAAGTTTTACAAACCAACCTAAGGATCGTAGGCGATTG
CTTTAAGTGCAACCAGAATTTTGTTCGGTACCGTCTTACATAAACGGCCT
TTTATATATTTGACAGGAAACTGCAAAGCAAGAAGTTCCCTTTTCACCTT
CTTATACTCTTGTTTCATGTACTTACGAGAGAAAAATGTTTCTTTCGTCG
GGTTCAGTTTGAACCACATTGTTCTATGGTTTTCTACTCTTTGCGTGCGT
AACTCGCCCTGTCTGTTgatcatcaaaaattttttgttgttcGAAAGGGA
ACGGAATCGTGTAAATCCTTTATAAGTTTGTTCCTCAAGAAGGCAAGATT
CGTCTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008099TCONS_00008099Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000082supercontigsc0000082:14788..19143 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.91	4.9	3.59	2.79	0.43	0.38	0.33	0.27	0.13	0.97	0.38	1.99	53.08	54.28	46.94	26.55	9.22	12.35	41.98	40.06	0.12	0.4	1.77	1.53	0.04	0.07	15.04	11.37	4.95	3.09