XLOC_004384 (gene) - C. hemisphaerica

Overview
NameXLOC_004384
Unique NameXLOC_004384
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000079:401523..406119-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004384 ID=XLOC_004384|Name=XLOC_004384|organism=Clytia hemisphaerica|type=gene|length=4597bp|location=Sequence derived from alignment at sc0000079:401523..406119- (Clytia hemisphaerica)
AGAAAATGTAAATGTTAAAAAAAAAGAAGTAAAACACATTGATAATAAAA AAGAAATATCAACATGAATGACGAGCTGGGGATACAGTTGAAAGACACTC CTCTTTTGTAAGCTTTATTAACATTAAAATTATTATAAGTTTTGTTATAT CATTTAAGGCGAGGCCAGTTTAATTTGTTGTTTTACGGGCCAAGCTACCC AAAAAGAAGGGTCAGTCGATCGGCGAAAAAATAAAAATAAAAGTAGAATT TTATCTAGATAAAATGTCTTAAAAAGGCAGCAAAAACTACTGCATTTTGA CGAAAATGCGAAATAAAAATAAAAAGACACAAAAAGCTCGCAGAAGAAGA ATAGAACATAACATTTTCAAAACTTTGGAAAAACTACACCAAAATTTTGA AAATTTGACAGTCTCTAAAAAAATGAAAATAAAAATGTACTACCAAAATC AGTTTAATTTTTATTTCGATTTTTGCAATTTCAGGGTCGGTCGGGCCCGT AAAACAAATAATCAAATTGGTCTCACCTAAATGCATGATAAAAGTCTACA ATGTAACTCTTATAAGAGAACTTATCTTCACAGTAGTTATTTGATTTGGT TTTGCGACAACGTTTTTGATCAAGTCCTCGTGCAAAAGAATTTTTAATAT TTTTGTTACCAGACTCGGCTGCATATTGAAATGCTTGGTGACAACTGTGA TCCCAATTGAGCTGAGTGAGTCAATTTTAAGCATTTCTATCAGTTGGAAA GGATAAGTACTGATCTATTGGTCGAAGAAATTGAAATTCTCAAAATNATC AGTTGGAAAGGATAAGCACTGATCTATTGGTCGAAGAAATTGAAATTCTC AAAATATTATGCATGAAACTAAAGAAACTGTATGTGACGAAAATTTCTTT ATTTTCCTTTATTTTTTTTCAGGGAAGAAGAAGACAAAAAAGCTCATGTA AGTAATTGATTTTCATTCAATTTAGCATTCTGTCAATCTTTGTTTTTGTT GAATGAAAAATAATTTGCACCGTGATTTACATCATGGAAAAAAACAACAA CAAAAACATCATAACTTTAGAGAATGATGATGACTTGTTTCTCTTTTGTA TGAGATGCTTTCTATATTGAGCGGTCTAAGAGTTGTCTTGTTAGAACCGT CTTACGCTGTAGTTTATATTGCATGCAAGCTTACCAGACTTTGAACCACT AGGGAACAGAACAACACTCTCACCTCATGCATGATGTATAGGGGAATCGA TTCTTAGCACTCTCGTGGACAGACTTCTTGAAGCCAATTGCCCTCACATG GCATTGGTACGGCGAAGGTATCTCAGGTGGATAAATTTACGCGTAGAGAA ATCAGGAAAGCGGCTTCTATTTTCCCCTAATTTCTTTCGCATTCATATTT TGGGTTCATGATTTTAGATTTTTTCGCGGACTAAAATTCGCGAAAATTAA TCCACACGAAATCTAATCCACTAAAGGTACACTTCCTTGCCAAGTGAATG ACAGCACAAAGTGANCGTAGAGAAATCAGGAAAGCGGCTTCTATTTTCCC CTAATTTCTTTCGCATTCATATTTTGGGTTATGGAGTTGAATCCCAACCT CTTTTGGACGGTAGTCAAGATTGATAACCACTAAACTACTGGTGTCTTTA CCCTTTTTCCTGACACACTGAAATGGTTTTTGAAAAGACTTTGAGTTTCA TGGTTTATAACTTTTTAAAAGGTTCGACAAGATTTCTTTCATTGAACCGC TGTGCACATTAAATAAAAAGGTTTTAGTTTTACATAAGTGTTCCCGTTTC ATGTCAGACACATGACTCATCGGGACGGTGTCTTCCTATTGTTATATTAT GCTGATATAAGCAAAAAAAATGTTTTTCTTTTCCTCTTTCTGACTAATCT TGCTCCATATCCGTGTCAATCCAATGTGAAAAAGTTAAATTGAAATGACG AGTAAGAAAACGATATCGCTCATTATTTAAAAACAAGACCTTGTTAAAGT ACATATAAATAAAGAATCGTCATTTTTGAATTTTCAGGATAACTTGACGA TGTTACTGACGAAGTTATGTCGACGTGTATCCGATCTTGAATTAGCTCTC GATCGCAAAGAAATAGAAATGTACAAACTACGAAATTACTGCTCAAAGAA ATGTGATCATTTTGAACGTACCATAGCTGAACTATCCAAAATACTTCCTA GGACATGCTCGCATGATTCTATTCATCATAAAAAACAATTTAGAAAGAAT TTTGGTAAAAGACTCAGTGAAACGGATGATTTTCTTCGTAACAACAACAG CAACAACAATAATTGTGATTTTGAAAACTTGGAATCTCACCAACAACAAC GGAAACGTAGACAGATCAATGAAAACACATTCGAAAAATCGTCGTCCAAC ACACCAAATGATTCTCTGCACGATCCCACCGATANACATTCGAAAAATCG TCGTCCAACACACCAAATGATTCTCTGCACGATCCACCAATGGCGACAAG TGAACCTATTTCACCACTGGATACAAATATACTTCATTTACGAACTGATC GTCAGAAAGAGACTTCAAAACTACACCGGCCCTTCATTGGATCAATCACC CAAAGAACTTCAGGTAAGTGATTCAGGCCCGGCGGAAGCGGGGAGACTGA GCTTCCTCACTTTTGAGCAAATGAGATTTTTTTATCAAGTTTCTAGCGAA TTTTACCACATCTTTAGCCTTCAGCCTCTCCACTTTTACGGTTGTTCTGC CGGATCTGTGATTGTTATTTATTAAGCTTTAATTTGGCCACTCCTGTCTG CCTTACAGGAATTTGCTCATTTAAGCCAAAACAAAATTTAACTTCTCTTG TGTACTCTGCAACTAGATTTTGTAAGCTGCAAAGGAGAATTCGGAATGCT TATCCCTAATGGTCTTGAAGCAGTCGGAGGTAACCCAAAGGCTCCTCTTT CGATAGCTGTCTACCCGGTAGGGAAGGGCGTCACTCTTTCGCCCTGGATT GCTCCACTTACCCTTGATTCTTTCCTTAATTGCTGAGCATCAAGCAGAGC ATTTTTGCGTACGAAGTTTTTGGTATGACCCGGCCAGGGATTGCACCAAT AAGCTTACGCACCGCAGCTGGATACTCTACTTTCATGCTACTTAATTATG CTTGATATTTCAGAACTCGCGCACGACCAGAAGAGCACTAATGAGGAAAG AAATAAAACCTCTTCGAGTATCGAACAATTGCCTCGCCACATCTCTATTT ACGATACATCTCAAGATGATATCGATGACCAAAGTAAAGACATTGATGAC GATTTGAATGTCTCGCAAACCGATTCTGACATGCAGGTAGAAGTCGCATC TGTATGTGTCATCAGTAGTTCAGATGAGAGCAGAGACGATGATGGGAATC TGCTTCAAAGTCACCAAAAAGGATCAAGAAGTAGAAAATGGTCAATCTCA AGTGAGGCAGGATCTAAACAAATAAGTGATGACATAAATAGTGTGTCACA ATTTCTATCAACGGAAGATTTTAATTTTGACCACAGACGTACTATTATCG GGGAAATGCCAATTCCAGAAGAGGAGATCAATAACAATCAAATTGATTCA CCATTTGCCAGAGATGGGAAGATTACACTCAAAGAGTACCAACGAAGACG TCAAAATCATCTCGCCATGACCGAGAAGCCTTTAACACTAGAACATACCA ATATGAACCAGAATGACCAAGAAATTTCTAGATTGTCTCCAGAAATCAGT AATATTTCCCAAATTAAACTCGGCGAAAAAACAAAAGTTACAGAAAGCTT TATTCAAGATAATATTGACGACCAGCCAAGTAGCCAAAACGAGAACATTA GAAATCCTGGAACTAGCTTTGGGCAACAAAGTGATGATGAGAGCTTGAAA TCCAATAAAAGTTCCTTCAAAGAAAGCAGTTCCTCTGAGGATGAAGATTC TAGCTCTTCTAGCAGTAGTGGTGAAAGTAGCTCCAGCGATGAAAGCTCTT CTGAGGGTCTCTCTGAACATGACGAAACAAGCTCTCAAATAGAAAGCCAA GATTGTGAAAATGTTGACTTTGACCTGATTGAATCAAAATTCGAAGTCTT GACTCCTGTCTGTAGCGTTTACCGATGGAATATATCAGAGTTTAGTAGTA AGCTGTTCCGAAGTGATTTAAAGGTGTTTTCAAAACCGTTCAAAGTGCGT GATATCGATAATTCAAATACGTTTGAATTAAAAATGACCTGGTTTAGTGA ACTGAATGACGGTCTCTCTATCGAGCTACTGGAAAATGGAATTAATCCAA GAATCGAAATGAATGTGATTCTGACTTGTGAAGGGAATGGTTATTTTAAT AGTCAAACTCTGATTGCCAATTCGAAACTGGATAAAGCATTTCTACATAT TAACCATGTTAATGTTGCGACATCGGAATTTTGCAACTCAAAATCAGTCA TGGATTTTATTGAAAACGATACACTTTTCATAAACTGCTATTTTGAGTTT TGCTAAACCTATTTTGAGTTTTGCTAGGACGATCACTGTTTACTTTACTA TGCTATGAAATCTCTCTTCATGGCTCGTATGATATTCAAGTTTCTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007733TCONS_00007733Clytia hemisphaericatranscript
TCONS_00007732TCONS_00007732Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007732-proteinTCONS_00007732-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000079supercontigsc0000079:401523..406119 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.27 1.29 1.79 1.94 0.77 0.73 1.91 1.83 0.57 0.65 0.77 0.53 0.89 0.71 0.86 1.04 0.55 1.22 0.21 0.17 0.57 0.58 3.41 2.86 2.48 2.87 0.21 0.3 3.03 3.62