XLOC_004273 (gene) - C. hemisphaerica

Overview
NameXLOC_004273
Unique NameXLOC_004273
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000078:173460..176933+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004273 ID=XLOC_004273|Name=XLOC_004273|organism=Clytia hemisphaerica|type=gene|length=3474bp|location=Sequence derived from alignment at sc0000078:173460..176933+ (Clytia hemisphaerica)
GAGTAAAGAAGTGAAGTcaacaaaatatatatttacattaaaaagtaagt
tttgaattttcgaattttttatgtGATATTTGAAGTGGTTTGCGTGGATT
TACGTGTAGtggatttacttgaaatttcatCTGCTTGTGTTATCTTGGAA
CTATCTTTACCGTTGATATTTTGATGACGGTATTGTCTTTTATTTCTCTT
TCAGCATATTTTGAAATGGGTTTTTCATGTCCTTATTGTCACCAAGTGTA
TTACAATCAACAATCACTTGACCAACATTTGAAAGAATATCTCTTCTATC
CATGTTTGACATGCGCAGAAGAGTTCAGTTCATTGCGCCAACTGGAACAA
CATTGTGATGCTGTGATTCACAGGTCACCACCAGTGGATCCTGAAACCCG
CGATGAAAAATTGCAATTGTACCTCCAAGAAGCTTTCTACAAGGAGAAAG
TTATTGTAACGCGGACAGACCGTCGAAAAGCTAGAAAACTTGTTCAAGGT
TTGCTTGGAAAGATTATGGAGGACGTTACTGAACAGCCTAACGGAGACTT
GTACTCTAAAAAGATCCAAGCTGCTGGAAGCACCTCAacgcaaacaaaaa
ttatcGTAGCGGATGAATTTGATTTCAATGTCGTTCTCACGCAGAAATTT
TCCAGGTTCAAGCATCATGAGGAATTAGTCGATTATGATCTAGTCAAAGT
AAGTACAACCTGAGCCTCAttcttgaaattaatttttttttagaaatcta
aCTAGATTGACTCAGTCACAAAGCATAAATCTGTTGACTTATTGTTAGGG
AATCTATAATTTCAtacataaagaaagaaaaatataccAGAGGCCGTATC
TTTCCTTTATGAATTCGAACTTAATTTATCAGGCTACAATCTTAACTTGA
TTTGAAAGTCCCAAAGGTGctagatttgaaatttttggatggAAAATAAA
GCCAGATTTGGAAATAATGTGCTGCGCAGAAACAAAGATTCAATCCGTCG
CATTCTAAATACGATGCAAGACGGtgcaaatcttaaggcttcattttttc
ttgcttgagtgTTGAAGATTTAAACTCTGTTATCAAGCACCCTATCTCAA
ACCAAACGTCAAGCGGATTTCTTTCCCCTGAAAAGCTAAAAGCCAAAAGC
TTAAGAATATATTATACCCTATCAGTGAAAACATTTTGTCTGCTTTTTTT
TAGCATAGTTTTATTAAGTTGGACAAACATATCCGGATGGAGAGAGTATG
GGATGATGATGAATATGCTTCCATAGTCATCCCAAATGGTTACACCGCAC
CTAAGCATTTTAATAATTCACCTTGGAGCATTAAGAACTTGTCGCATAAC
CATCAACTCATTCCCAGATGGGTTCAAGAGGATTTGTACGCAAAAATCCA
AAACTCATTGCAAGAGGAACATTATGGTGCAAGTAGGTCTTGTTGTTATG
TTTATCGTATTCTAATTTGATAGACAGATGGTGGCGGATGAAATGAACAA
GAATCCTCCCTAAACCACTTAAGTCTTTGAAAATAGCTAAGTGATATACC
GTACATTTTGTAGTCTCTCTAGACGTAGCATACTATAGGTGACTATAATG
ATTATTATCCTGTGACAATTATCAAATTATCATAGAACACCCGTATGACT
TTATTACACGAATTATAAACAACTCCAGTCGATACATTTTGAGGTACACG
ACTGATTCttaaagttttgatttcttttcttttatcagAGATCAGATTGA
AATGTGTTCCAAACGGACCAGCAATCACCATGTTTGTGAACCACACGGAT
GTTGACCATGAGATCAGTATCGATCTCTCTGCTTGTATCGAGACTGACCT
CCCTGTTGGAATCTATGGCTGGCCACGGTCAGGAACTCTCCGTGTTTTAT
CAACACCTCAGATCAAGAAAATCGAAGAAGCTGGCATCATCTTGGTGCCT
AAACATGAGCGCTTTTGGTACATCTCTTTTTCGAAAGCCGTCACATCTTT
GATGCAGTTTATCGATGGGGCTGATGAGTGCCGAAGAACCTGTCATAAGA
TTTtgaagaaagatttcaaaacttgGCAATCGCAAACAGGATCCGCAGGA
CTGAAAGGAATCTCGACCTATCTTTTCAAGGTATGCTTTAGTTTCAAAGc
tacaatagacgatatcggaagGAAAAATCAGATTTTACCTCCGaaaattg
cccacaatgctttgcgcggaaaaaNcttaacatgaaaactcagatttgac
ctccgaaaattgcccacaatgctttgcgcggaaaaaagttcacggtgaat
TTTTTTACGTCTATTGTTAAAAAAGTGCTTGTATGAGGCAGTCACTGAAA
ATCACAGATACTTTCCAATCTGTCTTCAAAGATTTATAATAGAGAGAAAA
AAGGAAGCGAAAATTTTAGACATGTCTCCTTCCCGTTTTGAACATTGATT
TGAAAGTACAATCTCTGTAAACGtggactatgctatagtctaagacaaat
cactatctaacaAATAAGCCCAAAGCCAAATGAAATTCGCAAACAGTTTT
TTTGACGGAAGAAGTTTACAGTTGGaagagtttgccagtcttcaAAACGG
CCGacttttttccgtataccgccataacggcTGTAAATTCCGCGcatata
ttttcccgcctttactaacCCTTTAACGGACAATAACATCATTTTTGTaa
acgttgtttttttttgtgtttaaaaTTCATGTACAtacttaaaatttaat
ttaataaaggtttttcttatttttctcctTACAGCATCACTTATTCTGGA
TGAACGAAAGTAAGCAGCATATGGGCAAAACGTACTGGAAAAATCGATAC
ATCGGTGATTGCTACATGGATATGTTGGAATCTCTGGAAAAGAAATGCCG
AGCAAGAAATCTGCCCAATTATTTTAACACTAAGGAAAATATCCTTGCCA
ACAAGGATATCAATGTCTTGAACAAGCTGGCCGGTTACTGCAAAGAACGA
AGATTGCAATTATTGCACATTAAAATGGGTTGATATGGATGATGGATGTG
attgattaattaacagaccaGTATGTAATTAACACGAATGAATGATTTCT
CTGATTAAGGGACCATTAACCTGtaagggaaaaaaataataGTAGGATTT
TGCGTATCGAAATGAAACCATTTAAATGGTAAAATTGACGTCACTCACAT
AATGGTCCAATAGCAAAGCTTTATTTCGCTACGAAAATTGTCTTGATGCT
TAAACTAAAAATTCGATTATTTCCTAACAATTTTTGCAGGAATATAtgtc
tcaaaatattttgtgaCAACTACAAATTGAATTCCATTCGGGATTCCATT
ATAATTTACTTGTATTAAAGTATATTTGTCATTGTTTCGAATAAGATTAT
TATATATTTTATCAATCGAAAAACTAAACTTGTAAATATTCTAATTCGAC
ATTTcgcttttgaagaattttcgc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007556TCONS_00007556Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007556-proteinTCONS_00007556-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000078supercontigsc0000078:173460..176933 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.09	0.28	0.1	0.03	0.88	1	6.83	11.48	4.43	32.03	4.63	4.42	21	16.1	7.16	10.01	4.07	3.33	14.01	16.38	1.72	1.83	3.45	5.69	11.29	13.43	5.18	10.56	2.14	2.13