XLOC_003959 (gene) - C. hemisphaerica

Overview
NameXLOC_003959
Unique NameXLOC_003959
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000073:468604..473542-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003959 ID=XLOC_003959|Name=XLOC_003959|organism=Clytia hemisphaerica|type=gene|length=4939bp|location=Sequence derived from alignment at sc0000073:468604..473542- (Clytia hemisphaerica)
AGAAAAACAGTAGAAATAAAAGCAAAAAAATGATCAAGATATCCACCGCA GGAGGTTATGATCAACTGGTCTACACTGACTTGCCAGAATGTAATTATAC AGAAGGAGCAAACATTGGAATAGAAAGTAAGATTTGTGTTTATACTACAT ATCAAGGGTTTTAATATTTGATAGAATTCAAATTAACTAATATAGGTGAT CATGACACTATGAGATGATTTTTTACTTGTTCATTTTAATTTTTATTTGC CAAATTTATTTGCATAATTTCCTACTTATAATATCCCACTTTTGAATTTA TTTCCAACAAGCACAAAAACGCCATTTTATTTGAATTCTATCAAAAGTTA CAGCCCTTTTACTTTCAGACAGACTTAATTGGATAATGAAGATAGTGGAT AGATAATAATGATAATGAGAACGTTTCTTGGGGAATAATTTTGCTTTAGT TGGACAAAAATATCGAATTGCATTATCGTGTTTATTTCAAGAAACTATAC TATTATCATTTAGAAATTGACAGCTCAGACTGTGTGGTAGTTGCAACACA CGCATGTGGAGTCAATTATGCAGACTGTATCATTCGGTGGGGTTTGTACA AATCTGCAAAAGATCTAGTAGGCTGGCCAATCACACCTGGCTTCGAGTTC AGTGGTACCATTACACACGTTGGGGAGAATGTAACAGATTACAAGATCGG GGATAAAGTTGCTGGAGTCAGTTTATTTGGATCTTATTCCAAAAGGCTCA AAGTGCCTGCTTACCAGGTTCGCCATGTACCAGAAAACATTTCCATGTCA GAAGCAGCTGGATTTCTAACAGTTGGATTAACCGCGCATTATGCTATATT TGAGTTGTGTAAACTGCGGAAGGGTGATTACGTATTGGTTCACTCTGCGG CTGGTGGCGTTGGATCCATGCTGGTTCAAATGCTAAAGAATAAGATTGGC TGCCATGTTGTGGGTGTTGTTGGTCAAACACATAAAGTGGAGATGGCAAA GCAGCTTGGTTTGTCTCATAAACACATTTACATTTAAAGATCATAATTTG GCAGATGGATGATATTACCATAATGAATTTAATACAGTCTCTCTGATGAT GAGATCGACTGCAAACAAACAGATCTGGCATAATAGCAATATGTCCAACA CATTCCTGATTGTTAATTGTCTTTGTCTGGTTTTGTCTCTGTGATGCATA TTAGAAACCTTGGTTTTCTCTTACGAATTATGAGATAGGAGAACTAATTT GTATCTATTACAACAAATTTAATGATATTTTATCTGATTCATTTACCAGG CTGTGATGATGTGATAGACAAGTCCACTCAAGATCTGTGGTCAACCGCAG CTGATCTTACAGTTAATGGTTACAAAGCTATCTTTGATGCAAATGGTGTT GAAACGCTTCAACAAAGTTACAACAATCTTGCACGAGGAGGAAGGCTTGT GACGTATGGTAAGAATTAAACAGAGCATTCCCCTTTGAAGATACAGGATT TTCCTTTGAAAGTACAGAGGATTTCCCGTTGAAAATACAGAGAATTTTCC TTTAAGAATATAGAGGATTTCCTTTGGAAATACATAGGATTTTCCCTTAA GAATACATAGGATTTTTCTTTTGAAAATACATAGGATTTTCCTTGGAAAA TACATAGGATTTTCCTTGGAAAATAAAGAATGTTCTCCTTTGATTCAGAC GATATTCCTTTGAAAATACAAACATTTTGCTTTGAAAATGCAAAACACTT TCTTTTGAAACTCTTTTTTTAAACCCATACCGATTATCATCTTACAGGTT ACGCCACTATGATGCCGAAATCATCGGAAGTTAGTTCGGGAGCGATCAAA ACCACAGATTGGATGAAACTTCTATGGAAGTATAAAACAACACCCACCTT CAACCCTCTTGATGTAAGTGATTGGATGTCCTTTTCTCTACTGACTAACT GCTTCAAAAAGGTGTTTTTAGCCGCTTCTGATTTGTACTTGAATAATTAT TTTATCTTTGAGTCTATAGAGATGCTAGACATTTTCCGGGTTCTTTTGAG ATGACTTGGCCTAAAAAAGTGTATAATGCGTCGGAGTCATATCCATTGAA GGAGAGCCTCGAGGATCTTTTCACTCTGTCTCTTTTTTTGAAAGCCAAAT AAACATCATTGTAATAAACCGATAATACTTAGCTTTGCTTGAATAATTTG AATGATCTCTTTGAGTCTATGAAGATGTTATACATTGTCTGGTTCTTTTG ATATAAATCTAAAATCTACATAAAATTAACATAGAAATTAACATAAAAAA ACATGCGTATTTGTAATAAAAGTAGCATGAAGGAAGTTTAGAAGTGTGTT TTACTAGACTCGTTTCTTCCGCAACGAAGAAACTCTATAAGTCTATCCCT AGAATCGATATATGCTTTAAGATATATATTTGGCATAACGTACGAACAAG GTTGATACTCGTAGCTTGAAATGTTGTCCTCCTTCACTGGTTACATGGAA AGCGATAAGATTTAACGTGTNGTTACAACAATCTTGCACGAGGAGGAAGG CTTGTGACGTATGGTAAGAATTAAACAGAGCATTCCCCTTTGAAGATACA GGATTTTCCTTTGAAAGTACAGAGGATTTCCCGTTGAAAATACAGAGAAT TTTCCTTTAAGAATATAGAGGATTTCCTTTGGAAATACATAGGATTTTCC CTTAAGAATACATAGGATTTTTCTTTTGAAAATACATAGGATTTTCCTTG GAAAATACATAGGATTTTCCTTGGAAAATAAAGAATGTTCTCCTTTGATT CAGACGATATTCCTTTGAAAATACAAACATTTTGCTTTGAAAATGCAAAA CACTTTCTTTTGAAACTCTTTTTTTAAACCCATACCGATTATCATCTTAC AGGTTACGCCACTATGATGCCGAAATCATCGGAAGTTAGTTCGGGAGCGA TCAAAACCACAGATTGGATGAAACTTCTATGGAAGTATAAAACAACACCC ACCTTCAACCCTCTTGATGTAAGTGATTGGATGTCCTTTTCTCTACTGAC TAACTGCTTCAAAAAGGTGTTTTTAGCCGCTTCTGATTTGTACTTGAATA ATTATTTTATCTTTGAGTCTATAGAGATGCTAGACATTTTCCGGGTTCTT TTGAGATGACTTGGCCTAAAAAAGTGTATAATGCGTCGGAGTCATATCCA TTGAAGGAGAGCCTCGAGGATCTTTTCACTCTGTCTCTTTTTTTGAAAGC CAAATAAACATCATTGTAATAAACCGATAATACTTAGCTTTGCTTGAATA ATTTGAATGATCTCTTTGAGTCTATGAAGATGTTATACATTGTCTGGTTC TTTTGATATAAATCTAAAATCTACATAAAATTAACATAGAAATTAACATA AAAAAACATGCGTATTTGTAATAAAAGTAGCATGAAGGAAGTTTAGAAGT GTGTTTTACTAGACTCGTTTCTTCCGCAACGAAGAAACTCTATAAGTCTA TCCCTAGAATCGATATATGCTTTAAGATATATATTTGGCATAACGTACAA ACAAGGTTGATACTCGTAGCTTGAAATGTTGTCTTCCTTCACCACTAGTT ACATGGAAAGCGATAAGATTTAACGTGTTTTTTTTATACAATATTTGTTC ACGCTCTATCCGTTTATATTTAGTACTGTGACATTATCGAGTAAATATTT TTGACGATGTTTTCATTGAAAGTGGTCTTAAAGAGGATAAGTCCTTCCGG ACTAACTTATAAGGATATTTATCATGTTTACTTCTACAAAGCGATTTTAT AAGAACTTTCATTTCTACTCCATGTTTTCCCTTTCATATAAGGAAGCTCC TAAACAATTGTTACAATTATAAGCTACTCTTTAAAATTTGATGTTTCGAA ATTAATTTATGGAAATTTAGTTTTAAATTTCAATACGGTCCCGTCTAAAT TTCACTTCACATCTTAAGGGCTTTTCTTGACGAAGAGGGGTGTCCAAATT GAGTCAAAAATTGTTGATGTTGTTTTTGTTTTTGTTTACATAGATGACGT CAGAAAACAAAAGCGTGATGGCGTTCAACTTGAGTTATATGTTCAATGAG AAGGAACTATTGAAAGAACTTTTTACCGGGCTTTTCCAGTGGATATCCGA TGGATCCCTCAAAGTCGCCAAAGTGACGGAGTTCTTGATGTCGGATGCGG GTGGAGCTCATCGCGCGCTCGAGTCTGGTAGCACGGTCGGTAAATTGGTC CTGCTAACGGAAGGAGATAAACCCATTCAGGAAATGGTAGTTGAGGAAAA TAAAAATGAAGGAAAAAATCATGTTGAATCAGACGAAACTAAGCTACTCT GATGAACAATGGTAGATTTATCGTTGGCACCTTTGCCCCCGCGTTTGCGC CTTAGTCTGCCAATAGCAAGAACCAATTTTAGCAAAATGAAGCTTTTGCA AGACTTCCTTAAACCTGATTATCGCTGATTCGTGATTCTAAAAGACGATA GCACACAGATTAAAAGTGGTTCTTCCACGAAAAATAAAATTTTAATTTTG ATACACAATATATTAGTTATGAATTTTAGTTATGAATTTTAGTTTACACC TGATTATACATATATCAAGATAATGAATTTTGTTAGTATTCCACCTATTA GACTTTACAAAACTCTCCTTTGCAAGATAAGAACCGCGGCACACGGCAAG GTTTTTCAAAAAAGTAAAAATTGCAAATGGTAGATGAGGGACTAGGGTGA TCACTTTTTATTCAATCTAAATTTGGTTCATTCCTTCTTCTTCGATTTTC GAAAACAACACCACTGCCTTACCCATGATGAATGCCACTTTGGTAGAACA ACTTCACATAAATTTTAGCGAAATATAATAGAGAAAATATGTAGTAATTT TATGTTTTCAGTTTTATAATTGTAAAAAATCTAGGCATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007077TCONS_00007077Clytia hemisphaericatranscript
TCONS_00007076TCONS_00007076Clytia hemisphaericatranscript
TCONS_00007075TCONS_00007075Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007075-proteinTCONS_00007075-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000073supercontigsc0000073:468604..473542 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
41.45 40.36 52.34 53.57 3.39 2.6 23.98 25.1 27.15 32.97 21.74 14.5 25.33 18.3 35.66 41.2 44.84 43.32 10.92 20.97 18.27 21.95 20.26 22.13 26.53 33.77 20.84 12.6 32.77 20.56