TCONS_00007075-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007075-protein
Unique NameTCONS_00007075-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length400

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007075-protein ID=TCONS_00007075-protein|Name=TCONS_00007075-protein|organism=Clytia hemisphaerica|type=polypeptide|length=400bp
KNSRNKSKKMIKISTAGGYDQLVYTDLPECNYTEGANIGIEKIDSSDCVV
VATHACGVNYADCIIRWGLYKSAKDLVGWPITPGFEFSGTITHVGENVTD
YKIGDKVAGVSLFGSYSKRLKVPAYQVRHVPENISMSEAAGFLTVGLTAH
YAIFELCKLRKGDYVLVHSAAGGVGSMLVQMLKNKIGCHVVGVVGQTHKV
EMAKQLGCDDVIDKSTQDLWSTAADLTVNGYKAIFDANGVETLQQSYNNL
ARGGRLVTYGYATMMPKSSEVSSGAIKTTDWMKLLWKYKTTPTFNPLDMT
SENKSVMAFNLSYMFNEKELLKELFTGLFQWISDGSLKVAKVTEFLMSDA
GGAHRALESGSTVGKLVLLTEGDKPIQEMVVEENKNEGKNHVESDETKLL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003959XLOC_003959Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007075TCONS_00007075Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020843PKS_ER
IPR013154ADH_N
IPR013149ADH_C
IPR002364Quin_OxRdtase/zeta-crystal_CS
IPR011032GroES-like
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020843Polyketide synthase, enoylreductase domainSMARTSM00829PKS_ER_names_modcoord: 35..368
e-value: 2.3E-24
score: 96.9
NoneNo IPR availableGENE3D3.90.180.10coord: 8..171
e-value: 2.5E-37
score: 127.7
NoneNo IPR availableGENE3D3.40.50.720coord: 172..282
e-value: 3.6E-17
score: 62.2
NoneNo IPR availableCDDcd08275MDR3coord: 13..370
e-value: 1.8235E-133
score: 388.097
IPR013154Alcohol dehydrogenase, N-terminalPFAMPF08240ADH_Ncoord: 48..110
e-value: 9.6E-9
score: 35.0
IPR013149Alcohol dehydrogenase, C-terminalPFAMPF00107ADH_zinc_Ncoord: 173..324
e-value: 3.1E-21
score: 75.5
IPR002364Quinone oxidoreductase/zeta-crystallin, conserved sitePROSITEPS01162QOR_ZETA_CRYSTALcoord: 162..183
IPR011032GroES-likeSUPERFAMILY50129GroES-likecoord: 45..167
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 133..271

Blast
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BLAST of TCONS_00007075-protein vs. Swiss-Prot (Human)
Match: VAT1 (Synaptic vesicle membrane protein VAT-1 homolog OS=Homo sapiens GN=VAT1 PE=1 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 7.045e-39
Identity = 98/323 (30.34%), Postives = 155/323 (47.99%), Query Frame = 0 
Query:   54 HACGVNYADCIIRWGLYKSAKDLVGWPITPGFEFSGTITHVGENVTDYKIGDKVAGVSLFGSYSKRLKVPAYQVRHVPENISMSEAAGFLTVGLTAHYAIFELCKLRKGDYVLVHSAAGGVGSMLVQMLKNKIGCHVVGVVGQTHKVEMAKQLGCDDVIDKSTQDLWSTAADLTVNGYKAIFDANGVETLQQSYNNLARGGRLVTYGYATMM--PKSSEVSSGAIKTTDWMKLLWKYKTTPTFNPLDMTSENKSVMAFNLSYMFNEKELLKELFTGLFQWISDGSLKVAKVTEFLMSDAGGAHRALESGSTVGKLVLLTEGDK 374
             ACG+N+AD + R GLY     L   P+TPG E +G +  VGE V+D K GD+V  ++  G + + + VP+ Q   +PE ++  EAA  L   +TA+  +F+   L+ G  VLVH AAGGVG   VQ+ +      V G    + K E  K+ G    ID  T D       ++  G   + D  G     + YN L   G++VTYG A ++  PK + +   A+  T W +         +   L +   N++V  F+L Y+  E EL+  +   L    + G +K    + +       A + ++    VGK++L+   +K
Sbjct:   84 RACGLNFADLMARQGLYDRLPPL---PVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVLFDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASAS-KHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTAKGYNLLKPMGKVVTYGMANLLTGPKRNLM---ALARTWWNQF--------SVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDSVWPFEKVADAMKQMQEKKNVGKVLLVPGPEK 391
The following BLAST results are available for this feature:
BLAST of TCONS_00007075-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VAT17.045e-3930.34Synaptic vesicle membrane protein VAT-1 homolog OS... [more]
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