XLOC_003779 (gene) - C. hemisphaerica

Overview
NameXLOC_003779
Unique NameXLOC_003779
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000070:352975..361219+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003779 ID=XLOC_003779|Name=XLOC_003779|organism=Clytia hemisphaerica|type=gene|length=8245bp|location=Sequence derived from alignment at sc0000070:352975..361219+ (Clytia hemisphaerica)
ttcttttataaaagaaggatTTAAAAGCTATTTAATGAGCGAATATAAAA
GAATAGGTTGAAATCACGATTGCTGACTTTGACGAGGAGTCATTTATCTG
TCTCACGATTGACTAGATGAGAAGGCATCTGTTTATAAatgtgattttgg
aaaaatgaactttttgatttttgtggtTTTGTCTCATACTTTCTTGCTTT
GCCAAGGTAATTATTTGACCTAGaattattttttgcaaatttttccgCTA
Cctctttaattttcatttcatcattttattttttgactaattttttcaaa
tgctctctataattcgaatctctctgttattcgaacatATCAGACTTCCC
TTTCGAGTTTGAAAAGTCATTCATTAAGAGTCATCTGTAAAAATGTACAG
TCAAAAAAACTTCcctttatttcttttgtataaACAGTTTCAGCTTATGC
Tcagttaaccctttaagtgtcacggtcatttttttctaagttttttaaag
aaaattgctagttcaaactttaaatcttTAAAGGCTATAtttccggatct
agaaggagttggaagctcgtttatagttcgttggatagcttagagtcccC
TCTTTCTCTTAGGCGCcatcggcgccgcccgatttggGAAGGGTGGGTTG
GGCGGTGGtaaagggggggggtaggttagagGAATTAAAGTAGTCAGGCC
TGCTGCgtggacctgcctgaatgatagaaaggttcCCAGTGGTAAATCTT
CAAATTAATTTGCTGGAGGATAGAATCAATAAAGCAGGGCCAGATTTGGA
GGtacttggatcactcgttgaccaaaaatggtgaaaaaacgatcaaaatc
ttaaaaaagtggattttgtcaaatttttgcattttttttactttttggct
taaaacctcgctggaaagactcacttttgattttttttgcttgacaatga
agcccaatccaatttcTACAAGtcagaccaaaaatgacgatttctaactc
agaCTGGCCAttatagcccatgtctgatatatacgacattggcacttaaa
ggctTTTGACCTTAGGATTCTTATACGCTGGAGGGTAATTCATATCATAT
TTTTAtacgaaaacttttttttttatacagGCCTACCAAATATCACCATC
ACCGTACCGGAAAACTCCGTTTTAGATTTCTTCTTGGCTCAATTAAATCC
AGGACCTAACGCGACATACGcgttacaaaatttcaaagacaaaTTTTACA
TCAATGACAACAATCAATTATTAACCAATgggattttagattttgaaaca
aaaacattcTATGAGCTGTCAATCAAAGTTGAGCCCGACCAATCAGAATC
GTTCTTTGTTAAAGTAAGGGTTACGGATGTCAACGATAACCGACCGGTAT
TCACACAAAACACGTATTCTTTCGAGACCGTTTTCGATACAAGCCCAAGC
GCACAAAGCATTCGCATTGGGGAAGTTCGAGCCACGGACATGGACGCCAG
TTCGGATTTCCGAGTAATTAATTATGAGATTCTACCGAGCAATTCTGTAT
TTTACTTGCAAAGTCCAACCACCCCTGTAATTTATGCCCAAGCAGGTCAA
ATCCAGTTGAATGGTGAAAGGTCACGTGTTTACGAGATAACATTATCAGC
AAGAGATATTCCAAAAGAATTCAATGTTCTTACTAcagcaaaaattcaaa
ttcaaatgacATCATCAGGTAATGTTTGGTACTGATAGCAcaaatgaatt
tttcttttcgaaCACCTGTAACCGGTTTGTTAAACATACCCAATAAACAG
AAAACCTCAAAATTTATTGCCTTAGCACGAGCGATAAACGTGATATACGT
TGCTTTTTaatataccttattacacttattACACTACTCAAGTTATTAAC
GCGAATCGGTTACCCTTGCTTTTACAAAATTGGAGGCGTGGTTATTTTCG
AAAACCCTGCCTTTCGCGTAAATAAATTGTCACATTTATTCTTCTGCTTT
AAATACTTGATGAGTTATATAGTGTAACAAGTAGCTTTCTGTGCCTcttc
ttttcaagatttttccaaGGACAGACTTTCATGTGGCATCCTAATAAAAT
GGTCTCTAGTGTCTAGAAACAATATTATTTTAAAGCTCGGGCTTTTGTAT
GATTGAACGAACAACAAAGTTCTTCTTGAAATAAGGTTGAAAgtactgac
ctttataaaccctggaccaagctatatatCTTTGATAGTggagtttttat
ttgaaagtggTAACCACaaaagaagctattgcagtGTTGAAAATTTGCCT
AAAGTCCAATGTGGTTACAGTGTTTAAAGGCCGGTGTCCAATTTCGTGTG
AAGCGCgcgaaagattttttcttaaccatttttgcctgaagaaaagatta
cggcataaaaaagtttcgcgcgaacaaaaaaaaagttgaaggaagtttaa
cttttttcaaccattacgtcaattttgatcaatggaattgcttctttttt
caatcaaccaatgacGTTACATACAAATAACGTGAAAAGTTTCGCGTGCT
TCGCGCGAAATTGGACACCGGCCTtaaggaaaagtagatctagtgCTCTC
AATGTATTACAccactattgagtagtgctaccattagggtaccacttaaa
aaaactctgatcaaaagattttgctttgccGTGTTTAAAAACTAACTCCA
GGGTAAATTAAGCTCAGTTATTGAAAGAATATTATGTGTTAGGTGGGATG
GACTTGATGGACTTCAAATAGATGACAACGAACTGAATCTTTTCTAACTA
TATTTCTTTATCAGCCAGTCCAATCACCACCAATCCACCAACTCAACCAG
ACTTCAAGGTAGCATGGGTTTATACAACATTTAGTATTCCAGAGTCTTCA
CCGTATGACTTCCAAATCACACCAGCAAACCCAAATTTCAGAACACATTA
TCAATTAAAAGCATCCAGTGACCAAGATGCATTTGCGATTAATGAGAAAG
GTTTgtaaaaatggttttcttttCCCAACGTATGGATGCATTTTAAGTTg
caagaatttttctttttcgttatAATATATCATAAAGTAATATCCTGTCA
AGAATTTATTGGTACCAACGTGTTTTTATCTGACGCCTCTAGCATTCATT
CTGATGCCAAAAATTGTTAGAAAAGTAAATATACACTTACTTCTGTGACA
GAGTTTTTCTTAATTTCAGGGGCATTGGTATTACGAAGGAAATTAGATTA
CGAGAAGACACAACGCATCGAGTTGACATTCACAAATAAAACAAACCTAG
ATTCTATTTCCATCTATAATTACATCATGGTGCTTGACATAACTGATGTG
AACGATAACCCACCGACCCTCAAAGTTTCTCCAGTTTTCCCAAGAATCAC
AACTAATTTCCCTAAAGGATCTTTAGTATCACATGTCGGTGTGCAAGACT
TGGATTCTGTGTCCAAGACATTCACCTTCTCAATAAATAACGGTGATCCA
AAGAAATTATTCACTATTGATGACCAAGGTAGCATCTACACAACTCAATG
CCTAGGAACTGACGCGGTTGGACAGTACAGGCTTGGTATTAGAGTCAAAG
ATGGTGTTTTTATAGCCAATAAAACACTCATGGTTCAAATCCACAAAGCT
TCAGATAAGGATTTTGACAACAATTGTGGATTAGAATGTAATCCAATCAC
CTTTAGTGTGACCAGTACTGCTAATGGTGACGTCACTTTCACGAATGTTg
aacaaaatggtcaaattctCAACCAAACACAGCTCCAGACAATTGTTGGT
GATCCACAAAGTACTGAATATTCAGATTTATCCAATGGTATACAAACATC
ATTGGTTGAGTTTTTCGAACGTAAATATTCGTTGANAAATTAGATTACGA
GAAGACACAACGCATCGAGTTGACATTCACAAATAAAACAAACCTAGATT
CTATTTCCATCTATAATTACATCATGGTCCTTGACATAACTGATGTGAAC
GATAACCCACCGACCCTCAAAGTTTCTCCAGTTTTCCCAAGAATCACAAC
TAATTTCCCTAAAGGATCTTTAGTATCACATGTCGGTGTGCAAGACTTGG
ATTCTGTGTCCAAGACATTCACCTTCTCAATAAATAACGGTGATCCAAAG
AAATTATTCACTATTGATGACCAAGGTAGCATCTACACAACTCAATGCCT
AGGAACTGACGCGGTTGGACAGTACAGGCTTGGTATTAGAGTCAAAGATG
GTGTTTTTATAGCCAATAAAACACTCATGGTTCAAATCCACAAAGCTTCA
GATAAGGATTTTGACAACAATTGTGGATTAGAATGTAATCCAATCACCTT
TAGTGTGACCAGTACTGCTAATGGTGACGTCACTTTCACCAATGTCgaac
aaaatggtcaaattctCAACCAAACACAACTCCAGACAATTGTTGGTAAT
CCACAAAGTATTGAATATTCAGATTTATCCAATGGTATACAAACATCATT
GGTTGAGTTTTTCGAACGTAAATATTCGTTGGTTCGATTAAACGTTACCA
ATATGACCATTGTTGACCAACTTCAAAAGCGGCAAAGAAGATCTGCAGAT
CCTGAAGCTTTTTTGAGTGCTCAATACATTTTTGAGGTCAAAACTACAGA
TGCGACTTTGCAAGAATTGAACCCAATCAGTCAAAATGAAACCATCGAAT
TTACAAAGTCTTCGAAATACAGATTGCAAACGAACGATCAGTTGAGTGTA
GTTTCCGGTAAGTTTtcctttacacgttttttataagaacaaaatgttca
atggcaaattttttatcaaatgttaagaacattttaaggctctaaAAATA
CCCgctttcttaggaaattgcacaaaaatactcacttaatggtgaaaata
agaacaggttaaagaaataaaatttttaggaaGGAATATCCGAAGGGATC
AAAAATTTGGAATATTCTTATACGCGTATCTCGTAAATCTCATTTAATTT
GCAAAATTAAGTTCAAGGAAGCAATTTCCGGTATGTTGTCCCAGACAAGG
AGGcattgttaatatttttttatatttgacgCAATAGGCAATAATTTTAT
TCAACATTTAATTTTGAGATTTCCCtctttacacccctgtgtcgcTGACC
AGCTGGCACCCAAGCCCCACCGGAAAACTTGGCCAAAATGTCGTCCCCGG
TGgacaaaataccctacaattttagtcccactggaaaattgactttgatt
tcatccccactcgaaattcaatgtttaaaattgCATTTATAAACAATCcc
tactggattttttaaccttggaacaaaagaatttctatatTCTcgttggg
atttcaataggaatttttatccccatcgaGGAAAAAGAGTTCGGCCGGGa
ctctgagacaggggtgtctctTTGATGGATTTTTTCAAGATCTTTCCCTT
ATTCCTTTTTTTCTAGATGTTGACGAGTGTCAAACGAACTTGGATCAGTG
TGACGTCAATGCATATTGTATGATTTACCCAAACGTTATTTCGTACACCT
GTCAATGCAAAGATCAATACGAAGGGGATGGGTTCGAATGTAACAAAATT
GTTGATAAAGGTAATCCTCACTTTATCATTTTGAGAGAGAGTTTTCGTCT
AAAGAACgaataaagaacgacaaattttgaCGATGACGACAGTAGTCACC
GTTGCCTTGATTCACCtgtgtactctcgggtacctaatagctgcaccccc
cgctaattaatttttcgaaaattttccacacaggacattcttattccNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNg
ctaattaatttttcaaaaattttccacccaggacattccccccccccgct
tattaatttttgggaaaatgtttttgaaagttcccttttttgtcttaatt
ctgctgtattagcctccttttcaaacattttcaaccCAGGATTTTcaacc
cccgcttattaaattttgaggttttttccaacccccctgcttattccgac
ccccccggctattaggtacccgagagtagatgTTCGACTATCAAAAATGG
gagaaagtcaaaagtaaatgccTGGTTTAAGTCAATTACACCTAACTAAA
ATAAATAACCtttatcttttttatcaaacagttGACAAGAACTTGATGAT
TGCGATCGGTGTATCAATCGGTGGGGGAGTGCTTCTCATTATTGTCGTTG
TCCTTGTGGTCGTCTACTGTAAAAACAAATCAAGATATCTCAGGGATCTA
AAACGACTCAACGCTAATACACAAGCAGGGTAAGACAGATTTCTTGTTCT
TTGTCAACTAACGCTCACCTCTCCAGGGGTAACTTTGGAAAGGTGGGTGC
TGGATATGTATTAATTGGTAAGGGCAGATTTGTTTATCTCTTAAAGGCCC
CTAAAAGATGGTCTTTTTTAAAGGGTGCTAAGAATACGAAAATCAAAGAT
TGAGTCAATTGAATAAACTGCATTTcggaacatttttaaaaatcagtcTC
TCGGCTCAAATATTGTCTTTAAATAGTTTTAATCTTTGATTTTCGCACGG
GTTTATATGTCACCTCTAAACCTTACACTTTCTGCCAAGTAGAAATCTCA
AGTAGTACTTAGTATGAAACCCCGAATGAGGGGTCGGGTATATGCGAGCC
ATGGTGATCCCTTTTTTACACCCTCGAAAGTTCAAAAACCATAAATCAGC
CATAAgctctctgaaagggtcccaaatgaaatatcaaaatattgaaCTAT
TAAAAATCGACTCTCAAATTCTCGTAATTTTGATTGAAGTTTAAAATATT
GactgaaaattcagaaaatagtctctcaaagggtcttACAAACGTCAAGA
GAGGGAAAAATTCTCTCCCAAAGggtcaattttttaactttggctCGGAT
ATaccccgtcacctcgcaaacatAGAACCTCCCCCTTCCTGGGACCGGGG
AATGGCTAAACTGAGTTGAACCTTACTATTTAAAGGAAAGTAATTATTTC
TTTCACTCATTTGACTTCCAAGCccaagggctagactcgagactcctgaa
tggaaaatgaagccacttatttcccatccagaacgtccgcgcgtgttttt
tacacaaacactagattgaaaataaaatctatcgctagattccaaaaaat
gcagtccttaAAAACGAAGGAACcgtagatacaatccgtcgtcatgattg
cgcgCGTTCTAGACGCGCtatggatgggaaataagtgactTCACTTTGTC
TTGCCTgcgaaaggttagagattctactctagcccttcgggcttcaaact
caatggttcACTCCACCTGAGTTGAGAAGTTAGGTATTGTATTTTATTGA
TGTCAAATGAACTAAAATACAAGAATGAAAAACAATATTTGAACAGTAGG
AGGCAGGATTTTAATGTGTTTTTAAAATGGCAAGATCTTAGTTTGAGATT
AATAAGAAAAATACTATTAAGTTAATCTGTTGATTAATTTGCTAATCACT
GTTTAATTACTTTCCATTTTTAGAATGCcattgacaaaaaaatgagaTGA
TTAAAGCAGCATGCACTTTCATTCAATATATACTACTGTACGTGGGAGTA
ACTAAATAGATTATTATTGtggatcaaaatattttgaatgtgGAGGAAGA
CAAAGATTTTACTTCATAACACGAAACGATTAACGTATTCAAAATCAATC
TTAAATGCTTAAACGTCTTTttaatgacttgaaaaaaaaaaaacttggaa
aaacaATTTGTTAACAATTTTATAAAGATTTACAATACCGAAAgaccaaa
aaaaatctttctaacGAGTCNTTGTTAACAATTTTATAAAGATTTACAAT
ACCAAgacaaagaccaaaaaaatatttctaacgACTGGACGACGGACGAT
GATTAGATAATTATAAATCTCAagattatttcgtagaggtcaaAAGAAGT
GCGAAATATAATTCTATAAATATGATTGTTTGTATATATTTAGGTTTcgc
attttatttatttggatccctcttttgttatttttccagATATGCAcctt
aaaatattatttcaatAGAACGGCCAGGGGAGGGGATACTTAGACtagca
caggaaaaaattttcgatttccaaggttggaaatttcaagttttcttagt
tggaaaaaagataaaatccaatggaaaatccaacctgaaaatgtg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006756TCONS_00006756Clytia hemisphaericatranscript
TCONS_00006757TCONS_00006757Clytia hemisphaericatranscript
TCONS_00006758TCONS_00006758Clytia hemisphaericatranscript
TCONS_00006759TCONS_00006759Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00006758-proteinTCONS_00006758-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000070supercontigsc0000070:352975..361219 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.52	0.52	0.4	0.56	0.14	0.04	0.26	0.25	0.46	1.09	0.29	0.32	7.12	5.49	0.18	0.15	2.27	3.05	19.3	21.29	7.22	5.87	11.23	14.28	10.82	13.77	16.96	17.28	1.55	0.65