XLOC_003740 (gene) - C. hemisphaerica

Overview
NameXLOC_003740
Unique NameXLOC_003740
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000069:510914..516643-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003740 ID=XLOC_003740|Name=XLOC_003740|organism=Clytia hemisphaerica|type=gene|length=5730bp|location=Sequence derived from alignment at sc0000069:510914..516643- (Clytia hemisphaerica)
GAGTATAACGCGTATAAACTCCATATCAGTGGTTTCTCTGGAAATATTGG ACAAGATAAGATGAATTATCATAATGGAATGAAATGGAGCACACGTGACC GAGATAATGATCTAAGACCAGGTTCGGAAATAATTTTTATTTCAGATAGG TACCCGACCAGCTGCCAGTTGGGTCTATTACGAAATTCTACAGTAGACTC TTCGCCTATTCGAATCTTTGTATTATTCGAACTGACTCTTATCCCCCCTC AAGGAAAAACCCTCTCGATGTACTTTCTATAATTTGAATTTCTCTGTAAT TCGAACATCTAAGATTCCCCGTTGGAGTTCGAATTAGCGAAAGTCATCTG TATGTCAGACGGTCGGACGGAAAGATAGGCTTTAGCGATTAAAACGTGTC TTCTTTAAGTGGTGTCAGACCCGTTCTTTGTCTACTACAATGATTGTCAA ATCTAACTTTTGTGGTCTAAAGAGAAATCATGGAAAACATTAGTGTTACA TTCATGGTCAAAACCTAATCTTTACGAAGATTTCAAAATTCATTGCTGTA TTTCACTTCACTATACATGAGATAAACTCTTGTACAGAGATTTGAATGTC TTTTTTTCCTGTTGCAGTTGAATTCTCTATAACTCACACACACACACAAA GTAGTTAAGGAAATTTTGAGTTATCAAGATTGGTTTATGAGGCATTGTCA AGAAGAAAAGAAGACTTGTTTGAGTTAAGAAGTGTATAGAGGTTTGAGTT ATGGAGACTTCACTGTAATTTATCTCGGAGAATTATTTAGTTTGTAGGTT AAGTATTTACAGTTTTGAGTTATATCTTTAAAAATAGAATGAACCCGTTA ATGCCACTTGCATCATAAAGAAATCGCTCAGGGATTACAGTTTTGAGTCT TGACTTTNTACATCTGTCTAAACTTAAAAAGTCTAAGAGTTCTACTTAAT TAGTATCAACTTATTCTTTTACTTTTTATACCCCCTGGAATTGATCATTT TGGATATTGAACAGGCTTTAAAGATTCAAAAAGTGAAGCTTTATCGTAAA GAATCTATCCAAAATTATATAGAGCAAAACATTGAAATAAAATACACTGA AATGCCTGAAGATTGTGCCAGCATGAAACACCGTGTAGTAATTGTAAGTT AGTTCTTTATTCCTTGAAATTTCGCTTGAATTTTTTTCGAATTTTTTTGA GTACTTTGTGATTCTATTTATTTCAATATATAAAGAAAAACAGAATCAGG GGGTACTTTTGCTCTGCCCATCTTGCACAAAACACCAAAATGATGTCTAT CTGAGAGTCGTAACGTCCATAGAGCGTTAGATTAACATTAAAACAACGTC GTCATAAAGATAGGTCGATACTCGTTGGAATTCAGTAGATATATAGATAG GGAATTGCTAAAGGATCAATTCATTCTGCTAGTATAAAGGTCAAAGCTAA GATGAAGTTTTTGATCCTACTTTTCTTGGTGACTGTTCTACCATCGAATG TATCGACCACATGTAACGATTTTACTTTGAAACTTAATCTGTTGAAACAA CATGTTGAAATGGTGACTAATTTGTTGACTTTGACCAATCAACGTTTGAC AGATATCACTCAACAACTCAAACAAAACCTCACTAAGTCAAATGAAATAT TGAATGAGAAACTAACCAAAACGAATGAAGAGCTTTACCAGAAAATAATA CGCAATACACAAACAATCACAGAACAAATCACGAAAGATAATGAAGAACT AGAACACAAAATCATTGAGAAATTGACCAAGAAAGACCAAAGTTTAACTC AAAAGGTATCACAAATGACTGAAGACGTTCAATCATTAACGCAAAAAGAT AAAACCCAGAACAGTTTTTGCCAAAGTAATTCCCATAGATGTGGCTCTTG TTATTGTATCGAAGATTTGCGGATTCCTGATAAGCATTATTGCGATTGTC GTATGAAACCCATTCGTCGTGATTGTAAAGAACATCATTTGCAAGGAGAA AGGATCAATGGTTTATACCGAATCAACCATGACACTGATGGGAATGATGT CTCTGTCTATTGTGATCAAACGACTGATGGAGGTATGTAGAATATTTAGA CAATTCTTCTATTACCTTCGTTTTCTCCTTGATTTGAGCCTTATAAGCGT TATGTTCCTTTTCCTGAGTCCTTGCACAGTTCTCCTTTTTAATTTTTTTT ACTCAGGATACCGTCTAGAGCATTGAGTTTAATGCCCGAAGGGCTAGAGT AGAATCTCTAACCTTTCCCAGGAAAGAAAAAATGAAGCCTCTTATTTCCC ATTCAGAACGCGTCGCAATGATGAAAACAGAGTGTGTCTAGTGATTCCTT TGTTTTTGAGGACTGCATTTTTTAAATCTAGCGATATATTTTACTTTCAA TTCGGCGTTTGTGTAAAAACCACGCGCATGGTTGTATTTCCCATTTAGAA GTTTCGAGTCAAGCCCTTGGACTTGGAAGTCAATGGTCTAGAGTCCTTCC TCTGTTAGTTACTAACCCTATACATTACACGTTTTTTATAAGAACATGGA AACATTTTTGAAGCCTTCGGATGTCCTTAACTTTTTGAGTTTTAAAGCTT AAAAATGTTCTTAAAATGTTCTTATTTTCACCATTTTTACCCATTTTTCC TAAGAATCGGGTGGTTTCGAGTCTGCAAAGCCTTGAAATGTTCTTAACTT GTTTTTAACATTTTGGCCATCGAAGCTTTATGTTCTTATATAGTTTGTTC TTATATATGAAACAGAAAAAACAAAAACAGTTTGCTCTTATAAAAAACAT GCAAGGGAAATATTTAGTGAGCAGCGAAAACCTTAGAAAGCTTGTCTTTT TTTATAGGTGGCTGGACAGTAATTCAAAGACGTGTTGACGGCACCACCAA CTTCTTCCGTAATTGGCAAACCTACAAACAAGGGTTCGGTCAACTCCACT ATGAACACTGGCTAGGGAACGATAACATACATCTTCTCACCAGACCACGA GACAGTTACTCAGAAATACGATTTGATCTGCAAAGAAAAGATTATGGTCG TAGGCAGTATGCAAAGTATTCATTGTTCAGGATTGATAATGAGTTGAACG CGTATAAACTTNACAGTTTTTGCCAAAGTAATTCCCATAGATGTGGCTCT TGTTATTGTATCGAAGATTTGCGGATTCCTGATAAGCATTATTGCGATTG TCGTATGAAACCCATTCGTCGTGATTGTAAAGAACATCATTTGCAAGGAG AAAGGATCAATGGTTTATACCGAATCAACCATGACACTGATGGGAATGAT GTCTCTGTCTATTGTGATCAAACGACTGATGGAGGTATGTAGAATATTTA GACAATTCTTCTATTACCTTCGTTTTCTCCTTGATTTGAGCCTTATAAGC GTTATGTTCCTTTTCCTGAGTCCTTGCACAGTTCTCCTTTTTAATTTTTT TTACTCAGGATACCGTCTAGAGCATTGAGTTTAATGCCCGAAGGGCTAGA GTAGAATCTCTAACCTTTCCCAGGAAAGAAAAAATGAAGCCTCTTATTTC CCATTCAGAACGCGTCGCAATGATGAAAACAGAGTGTGTCTAGTGATTCC TTTGTTTTTGAGGACTGCATTTTTTAAATCTAGCAATATATTTTACTTTC AATTCGGCGTTTGTGTAAAAACCACGCGCATGGTTGTATTTCCCATTTAG AAGTTTCGAGTCAAGCCCTTAGACTTGGAAGTCAATGGTCTAGAGTCCTT CCTCTGTTAGTTACTAACCCTATACATTACACGTTTTTTATAAGAACATT TTGGAAGCCTTCGGATGTCCTTAACTTTTTGGTTTTTAAGTCTAAAAATG TTCTTTAAAAGGTGCTTATTTTCACCATTTTTACCCATTTTTCCTTAGAA ATCGAATGTTTGAGAAAAAAAAATGAATCTTAACTTGTTCTTGATATTTT GGCCATCGAAGCCTAATGTTCTTTTATAGTTCGTTCTTATAAAAATACAT ATAAGGGAACAAATTTTGGTGATTAAAAAAAACCCTAAGAAACTCTGTCT TCTTTATAGGTGGCTGGACAGTAATTCAAAGACGTGTTGACGGAACAACC AACTTTTTTCGTAATTGGCAAACCTACAAACAAGGATTCGGTCAACTCCA CTATGAACACTGGCTTGGGAACGATAACATATATCTTCTCACCAGACCAC GAGAAAGTCACTCTGAAATACTATTTGATCTGCAAAGAAAAGATTATGGT CGCAGGCAATATGCAAAGTATTCACTTTTCAGGATTGATAACGAGTATAA CGCGTATAAACTCCATATCAGTGGTTTCTCTGGAAATATTGGACAAGATA AGATGAATTATCATAATGGAATGAAATGGAGCACACGTGACCGAGATAAT GATCTAAGACCAGGTTCGGAAATAATTTTTATTTCAGATAGGTACCCGAC CAGCTGCCAGTTGGGTCTATTACGAAATTCTACAGTAGACTCTTCGCCTA TTCGAATCTTTGTATTATTCGAACTGACTCTTATCCCCCCTCAAGGAAAA ACCCTCTCGATGTACTTTCTATAATTTGAATTTCTCTGTAATTCGAACAT CTAAGATTCCCCGTTGGAGTTCGAATTAGCGAAAGTCATCTGTATGTCAG ACGGTCGGACGGAAAGATTAAAACGTGTCTTCTTTAAGTGGTGTCAGACC CGTTCTTTGTCAACTACAATGATTGACAAATCTAACTACTTTTGTGGTCT AAAGAGAAATCATGGAAAGCATAAGTGTTACATTCATGGTCAAAACTCAT GAAGAGTATGGCCGGGTATTCCCGGTCGGAATCAGAATCTTTCTCTGTGA ACGGACCTTATCTTTACGAAGATTTCAAAATTCATTGCTGTATTTCACTT CACTATACATGAGATAAACTCTTGTACAGAGATTAGTGATTAGTCCTTTT TTCCCTGGTGCAGTTGAATTCTCTATAACTCAAACACACACACAAGCCCA GCCGGCACACAACGTTGTTTCAACGTCTATCTAACGTTCTCAACGTCCAT ATAACGTTAGATGAACGTTGAAACAACGTTGTGTGCCTGCTGGGAGTAGT TAAGGAAATTTTGAGTTATCAAGATTGGTTTATGAGGCATTGTCAACTGA ACAAGAAGAAAAGAAGACTTGTTTGAGTTAAGAAGTGTATAGAGGTTCGA GCTATGGAGACTTCACTGTATTTTATCTCGGAGAATTTATTTAGTTTGTA GGTTAAATGTTTACAGTTTTGAGTTATATCTTTAAAAATAGTTAATGCCA CTTGCATCATAAAGAAATCGGTCAGGGATTACAGTTTTGAGTCTTGACTT CCCTTCTTACATTGTTATTTCAGCTCATGATTGTGCTTATGATCAGAGAG GTGCTTGGTGGTATAACGGTTGTGAGACAAGCAATCTGAATGGAATTTAT GACTCCTTCAATAAAGAGAAAAATCCCGATGAAGCGTTTGGTTGGAATCC CTTCCGTTTGGAATTCTCTGAAATGAAAGTTCGACGGAAGTAATTGCCCG TGTGGTGCTATCCTTGATAAAGACATTGACTACATTTCTACGTTTCCCTC TAAAAAGGGTACTAATTTTCTTGAGAGTAATTTTTATGTTATGAAATCAG CCTTTCGGGTATTTTAGAAACCAGGAAAATAAAATAGCGGAGAAAAATAA TATATTGAATTGAATTTTATTGAACTGCGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006664TCONS_00006664Clytia hemisphaericatranscript
TCONS_00006663TCONS_00006663Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00006663-proteinTCONS_00006663-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000069supercontigsc0000069:510914..516643 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.06 0.06 0 0 0.06 0 0 0 0 0 0 0.7 0.24 0.07 0.03 0 0 13.83 17.79 0 0 4.21 6.21 1.13 1.64 0 0 0 0