XLOC_003506 (gene) - C. hemisphaerica

Overview
NameXLOC_003506
Unique NameXLOC_003506
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000063:608682..614487+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003506 ID=XLOC_003506|Name=XLOC_003506|organism=Clytia hemisphaerica|type=gene|length=5806bp|location=Sequence derived from alignment at sc0000063:608682..614487+ (Clytia hemisphaerica)
CAATACAGGAACAATTAGAATTCAAATTTATGAAAGAGATTCCTCCTTAA AGAATCAATACACAAATAAATGCAATGCAAATGATATCATTATAGTATAT TTGAAATCATTTCTTGAAATACATTTTTGAAGAAGGTTTTTTCAGCCTTC AATATTCTCGTTATGAAGACAATGCTGAGCTGGTTTCTCGCATTGAGTtt ggtttttcattttcattcgtCTGTGCTGGCACAGGTTTGTTACTTCGTTT TCATTTCCAATTTTTGTTACTATCAGCCCACCTATCTCGTATACCCTATA GAATATTTTATACAGTACACCCCCGTCTCACAGCCCAGGTGGAATTTCTT Tcttcaatggggatgaaaactcctatcgaaatcccaatgggatagaaatt ttattgttctaaggttaaaaaattcagtggggatggttttggagtgcaag cTTTGAATTTCTAATGGGGATGAAGTCAAAATCAATATCcaagtggggtt gaaatttcagggtattttcccaccgagGACGAAATTTCTGctaaatttcc cagtggggctggggtcacagcgggtctgtgacacatgagtgattgaaatt tcatatttttaggaGCTTTTGATGAATTGAGGTAATGAAGGAATTTTATT GCTCGATAATATAAAGTGCATAAAACTGTCAGAAAAGGAAGTATTCGGTC GGTCTGAAAATGGCCATAGATTTATTTCAAATATAGCCAGTTTTAAGTCG AACATCTACCGTTACAGCCATTACAGTGAAAATTTATGGTTTTAGGGTAA ATATGCAAATTGGACATTTTCTCAAAGCATCTGAAAATATACATGTCATC TACTGTCAGTCATTTAATTCTTCATAGAGCTAGAAACTAGACTGACTCAA GGGTTGCATGGTGTATAATCTCCGAGCAGACTGTGATAACTCTGCGTATT ACACGACACGTATTAACTCTAAATTTCATGGTTCCATAAGAAAATTAGTC CAGGTTGGTGGACCACTTTCAcctttttcatccagatttggtATGGTATC AAATTTGTGTTTTGCGTGATGATTGACTAaaacaggcccggcggaacagc cgtaaaagtggggaggttGAAGGGttaaatgagataaaattcacCAGAAA TTTGAgggaaaaatctcatttgctcaaggtggagaggctgaagtcaATCG TACCAAAATGAGAGCCCAGTCACGTTTGCCttcatttcaaagcaaaaagt aacgtaattttgattattttgactGAACAACCAGGTCTGATCACTACAAT CTCCATACCCATTTACAGGAGAGAGTGGTGTGAGCAGAATGGATGTTAAG TTATGAGCTTGCCTGAGGGAGGAACTTTTTAATTATTCcaaatttacatt ttaaaagCAATATATAAGCTGTCTTCCGAGAGTCAGAACCATCTTTTTGA CAAAATCTAGGGCAACAGGGCCAATATAAAGTTCAAAATAGATAAGGAAC TTAATTAATTAATTCCGTAAACATAATGGCTGTCACATAGACATTATTCC ATTTCTTTCCGGAgtgtttcaaaaatataaaaacgtgCCAAAACGAGCAA AACGATCATAGGATACATCTATCAAGACTTATGCAAGAAAACCGGTAATG AGTGAACATTACGTCATATAACGACTGGCGTTATTTTGTGACGAGATTAT GTAAATTTATTTCGACATTTAATTCTAATTCAAAGGTGGTCctaatatca aaagaaaggtttttagtATAATTAGCTGGTCGTTAATGAGGCTAGGACCT AATAAATATAAAATGATATTTAATTACCCACACTTACAATTAGTTATTAT ACTGAGTATAATTTGAGATTTCTTTTTCTGGTGGTAGCTTTAACATTTTC AATATTACTTATTTATATACCTATATTTTCAATATAGGTCTAAAACAAAC CCCATTAAAGTTACCATGATGTAAACCATGTCACATAATTATACTAATTT TCTAGAGCGTGGTTCCTAtttgatcaaaaatgaattCACACTAAAAGTTA TTGGATTTTACTAATGCAAACTgtcaatattttgaatttgaaggcGGTAA ACATACTgtgtattttcaatttcattggtcaaacattcaagaaaaaaatc tctttCGCCTATTCTTTCAGGACAATACCAACAAGATATGTTCTTCTGCT CCTTGCCAGAACGGTGGAACTTGTTCGGAATATGGACCAAACGATTTTGC ATGTCTTTGTGCATATGGCTTCGCTGGTAAAATGTGTCAGGTAGGTTCTT ATGTGCCTCAGCTGGCACagaacgttctttcaacgttttCTATAATGTTC CCAATTTCCATATAATGTcatatgaacgttgaaacaacattgtgtgtcAG CTTGGGGCGTTATTAGAGTCTGCTTCTGGCTACTTTAACTCTGTactaaa aaaatgaattttgtttattatttCTCAGAATCACTCTCGTCTAGTCGAAA GCTTTTAAGCCCATTAAGTGCCACTGGCATCATATGGTGTTGCTCGATTT TTTTGGTCCTATACCGATAGGTCTGGACCAAAGAGGTGACCCACGCCACG CTATTTTTTGTCCCACAgcctaaataaaaaaaattaagtttagaTCAAGA TTTTTTGTTAACTTGAATATGTATGCACATTTaagataaaaaatgtttga agattGGGTTCGCTGGAAAGCTTATTTCAAGATATATCTTTTACAGTATC TCGGCAAGATTTTTTGAGTTAGATTTTTAATCGAAATGACAACAGTCGAG AGATATCAAGTTTTAAATCCATGAACGCTGTGATGGAATGAAAAgagtta aaaatgaaatattttgtcttattaaaatttttggattgtAATTGTGACGT GCCGTGGCACTCATAAGGATGCCTTGCGTGAGCATAACTCTTCCAGTGtt gttcgagtgtcatggtatacgccatggcttggcagcttgCGTCTGTCAAC TCGCAGTGTCCGTCAGCGCTGTGATACCTATTCCTTCGAGAGTAGGACCC ATCCCAAATGattcggagggctcatatcatatctcatatcttaaaatttt tagtttataGAAGCACCAAAAGATTGTGATGTCAAATTAGGATGTAATGC TCTGCCAGCTGGTTGTACCGATAATTGCCATACAATTACCAGTTATTTAT ACAATGTTGAATCTAATCTAATGGAAATGACCATTCAAACGATAAAGAAA TGGGCTGCCGTTGGCTTCAATGATAAATCTGTCATGGTAAGTTGATGGGA ATCAATCCTGGAAATCCACTGACCTTCGTATATCATTGGACAANTATGGT AAGTTGATGGGAATCAATCCTGGAACGGATttctttgaaagtggtacccg catCGAGAGCGCTAAATTAACTTTGCTTTGGCGTTAGGCAAGATTTTAAC ACAACAGTGGCTTCTTTGCGGCTACCCCTTTAAAAAAGCTTGGTGCAGGG TTTATAACGGTCCGTGGGTAAATCCCTATCTCACTGACATAATCACTGAG CATCTAGCAGAGATGCATCAAATACCATTTTTGTACTAATAATACGAAGT CTTTTGTATGAGCCCACGACCTTGCACAGTTAGCTAATTGCCCTGCCACT GCACTAAAGTCGGTGAGCCCCACCTTATTAAAATGAaagttaaaatctat taaacATATAAAGATCCAGTCCTGTGTTGCCATCGCAGTCAGTACTTTCA ATGTTCTGCCTCACTGAAATGGATATTATCAGTTCTACCCTGATTGAATT GAAATTggtacatccctgtctcaccgATCTTGAAGTCGACTCTAGTTCAC CCCTAAATGACTGATATATTCCTATCTAATAAATAGCCTGGAAATAAAAT TTTCGAATACTTTGGTAATCAGCTGTTAATCACGCTACATTGATGACTTT GAGCAAAATGGTCATTTTATTATGggttttttattacaaaacaaactgct tttatATGAATTTTAATTTCAGCCTGGAGTTCGAGGTGTCCTTTGCAAAC GAGAACCAACAGATATCGTGACACTTACGAGCTTTAAAGCATCAGGCCAA CGACGACCAACTATCCAGAATCTTGCCAAAGGGAATAATATCATATTTTC TGCCAAGGATGGTTCAATGACATTCTGTGTTTATCAACGAACTATTACTG TTCCAGAAGAAAGCCAGGAGGCCATGTTTGATTTATCAGTGCCCCGACAC CTTCTAATGGCTGCTGGAGATACAAATGAGGACGGTCAAATTAGGTATCA TGCAGGAGAAAGATCTTCAACACCAACTCCAATTGATGCTATGAGATTCA GGGTAAGGTTCCTCTGATAAAAATATAACgagacaaaaaatgaaatacaa GTTTCAACTTGCACTATTNTCTGATAAAAATATAAGgagacaaaaaatga aatacaaGTTTCAACTTGCACTATTTAGTATACATCTTTCTGTAACTTGA GGTTctgaattttatattttgctATAGACCATTCCTTTGACCACATCGAC ATCTACTACGACAACCTCTACCCCTACAACAACAACTCCAATAACAACGA CCACAGCAACCACTACCCCAACCACAACAACTACCactccaacaacaaca acgacaacaacgacaacgaccactACCCCTCCcacaacaacgacaacaac cACTACCCCTACCACAACAACGACAACTACCACTCCaacaacaacgacaa cgacTACTACCCCTTCTACAACGACAGCCACAtctacaacaacgaccact acCCCTACAACAACAACGATAACAGCCACTACCCCTACCACAACAACGGC AACTACCACTccaacaacaacgacaacagCCACTACCCCTACTACAACGA CGACAACAATCACTACCCCTACCACAAAAACGACCACacctacaacaacg accactacccctacaacaacaacgaccactcctacAACAACAACGACTAT TCCTACCACGTCAACTTTAACAGCGACCCCTAAAACGACCACCCCTACAA CAATAAAGACCACTCCTACCACGATAACCACCACTCCTACCGTCTCTTCA AAGACATCTTCTACAACAACAACTCCACTCAAAATGACGTCTAGCTCTTT GCCACAACccacaaaatttttgaaaggtaTACTTTTGACAAGGCTTGGTG ACTTTCttgtttgaccaaaatttcataaattttgataaGGTTCTTACTGC AGTATCACATTAAAAGTTTAAGTAGTGTTTTTAGAAACGGAACagttttt tgaatatttgaaaaaaattaattttgtccaCACTGTACCCCCCACTGTAg gccaaatttttttgatttcagaATTCTGCACCGATCGCCATCTCGAACAT GCAGGCTACTATGCACATCCAATAAACAAGCGAAGATATGTGGTCTGTTG GCAAGGACGTGGATGGCTGTTCCAATGCAGAGATAACCTTCAATGGAGAG TCACTGGTAAAGGGTTAGGAGTATGTGACTACCCAAGAATCGCTGGTGTT GAGCAAAAATAAAGATATGTTGTTGAAAGAACAAAACCCANCTAGGCGTA TGTGACTACCCATAAATCGCTGGTGTTGAGCAAAAATAAAGATATGTTGA TAAAACAAACTAAGGATAAGAGCCAAAGTGGATACATTAGTTCGAGACGT TATTTTTTTACTGGTACTCAATGGCCAGTTGCTTTAGTGCTGAGCATTTT TGTAATCTACCATTTAATGTAAAATTCATATTTATTCATGTTTCATGTTT GTACCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006142TCONS_00006142Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00006142-proteinTCONS_00006142-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000063supercontigsc0000063:608682..614487 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.08 0.14 0.12 0.16 0.11 0.13 0.09 0.25 0.51 0.96 0.1 0.34 3.34 4.85 23.26 4.65 0.44 0.37 1.08 0.72 1.46 1.3 1.75 1.97 1.62 1.64 0.15 0.36 0.05 0.16