TCONS_00006142-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006142-protein
Unique NameTCONS_00006142-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length514

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006142-protein ID=TCONS_00006142-protein|Name=TCONS_00006142-protein|organism=Clytia hemisphaerica|type=polypeptide|length=514bp
MKTMLSWFLALSLVFHFHSSVLAQDNTNKICSSAPCQNGGTCSEYGPNDF
ACLCAYGFAGKMCQFIEAPKDCDVKLGCNALPAGCTDNCHTITSYLYNVE
SNLMEMTIQTIKKWAAVGFNDKSVMPGVRGVLCKREPTDIVTLTSFKASG
QRRPTIQNLAKGNNIIFSAKDGSMTFCVYQRTITVPEESQEAMFDLSVPR
HLLMAAGDTNEDGQIRYHAGERSSTPTPIDAMRFRTIPLTTSTSTTTTST
PTTTTPITTTTATTTPTTTTTTPTTTTTTTTTTTTPPTTTTTTTTPTTTT
TTTTPTTTTTTTTPSTTTATSTTTTTTPTTTTITATTPTTTTATTTPTTT
TTATTPTTTTTTITTPTTKTTTPTTTTTTPTTTTTTPTTTTTIPTTSTLT
ATPKTTTPTTIKTTPTTITTTPTVSSKTSSTTTTPLKMTSSSLPQPTKFL
KEFCTDRHLEHAGYYAHPINKRRYVVCWQGRGWLFQCRDNLQWRVTGKGL
GVCDYPRIAGVEQK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003506XLOC_003506Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006142TCONS_00006142Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom
IPR002557Chitin-bd_dom
IPR013032EGF-like_CS
IPR005018DOMON_domain
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0006030chitin metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006030 chitin metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0008061 chitin binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000742EGF-like domainSMARTSM00181egf_5coord: 30..64
e-value: 1.1E-4
score: 31.6
IPR000742EGF-like domainPFAMPF00008EGFcoord: 31..61
e-value: 1.4E-5
score: 25.2
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 27..64
score: 17.944
IPR002557Chitin binding domainGENE3D2.170.140.10coord: 444..512
e-value: 4.7E-6
score: 25.9
IPR002557Chitin binding domainPFAMPF01607CBM_14coord: 454..507
e-value: 6.4E-5
score: 23.0
IPR002557Chitin binding domainSUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 458..507
NoneNo IPR availableGENE3D2.10.25.10coord: 21..65
e-value: 7.2E-10
score: 38.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 241..443
NoneNo IPR availableCDDcd00054EGF_CAcoord: 31..64
e-value: 3.92966E-4
score: 37.231
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 30..65
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 52..63
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 52..63
IPR005018DOMON domainPROSITEPS50836DOMONcoord: 89..207
score: 9.818

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006142-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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