XLOC_003453 (gene) - C. hemisphaerica

Overview
NameXLOC_003453
Unique NameXLOC_003453
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000062:430112..437041-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003453 ID=XLOC_003453|Name=XLOC_003453|organism=Clytia hemisphaerica|type=gene|length=6930bp|location=Sequence derived from alignment at sc0000062:430112..437041- (Clytia hemisphaerica)
AAAAATCTTTAGCTCGTTTATATTTTCAAATTTTATATATTTAAAAATAT TTTTTTAATTAAATAGATTGATGTCAGCTGGTTAAAAGTAAGTGATAATG TGTTTGTAATTTTTGTACGCTCTAGCTTAGACCACCGACTTTCTGTCCTG TCTATTCTAATTGTTAGAGTAGGTACAGAGTTGGCAATTAAAATCTTAAC TTGAAAAGGACTGAAAGAAGTCAATACATTGGTTTTAGACAGCCAACTTT CTGCCCATCTTTTTAAATTCACAATTAGAACAGGCAGGGTGAAAAGTGGG CCGTTTAAACCAGAGCTAAATCTTGTAAGATAAATTACTTCAATCTATTG ATTTTGATGATTTCGATACTGCCTTGGCTTCTCTTGTTACTGTTTTATTA TCACATTTTTGATTTTGTTCATAATTTTACATTCTTCCATTTTTCCTTAT TTCAGTGAGGTTGACATACACATTCCTTTTGTTGGCGTGCCTTGGCTGCA TGACTTGTAGTAAGTTCTAAGTTCGCTTTTTCATGACTTTTTTAAGGGTG TGTTTTTACGTAACTTAACAAAAGATACAACGACTATAAAGCTTCTGATG CAAGTTTTACTGGGTGCTTCTAAGCAAAAATACCTTTGATATTTTATCAA GTCATCTTGACATGGTCTTCTCATTTCAAGAAGGCTTACTCTCGATTCTT TAGACCCTTTACAGACGAGACATCAAATTACTGACAAAACAAAACAACAA CATTATTACAAACGAACTGTGAACTCTCCACTAACCGTCGACTCTGCTGA AAATATACCTCAAACACCGGAAATGAATGTGGAACTACCCGATACTGCGG ATACACCGGACTCCAGAACAAACATTCCGCAAAGTAAGATTCAGACTTTA TTCCTGAAACAGAAAAATGTGAACAATAGACTGCAAACACATGTAACTGA GAACAATAATAAACGAACAGAAATCTTCAAAAGAATGCGAACACCCGATA CCGTAGATACACCGACCATGGACGTTGATACCCCGAACACACCGGACACT CCCGAATTCGACGTAAATGTAAACTCGACAAAGAATACTCCAGACAGTAC CGGATTTCAATTTTCCGGTGATGATGACCCAAGTTATACGGAAGTTGATA ACGGAAAATTAAGACCAATCCATTTTATAGCGAACCCGTTTTCTAACGTA ACTGAAACGACAGGAGCGGTTTCCGTGCGCTGGAAACCGTACAATAAGAA CACGTCGCGTATCACTATTCATGGTGCACGGATGCACGATGAAATTGAAG CCAAAACACAAGAAGAAGATGCCGAGAATAAAAATATGATAGGAGAAGAA ACTCAAATCTCCCTTGATAAAGAAAATGCTAAACTTTTCAAAAACTCTAC TTTTGATAATACAATGTTGGATTATTTTTTCAACCAATATAACAAAAAGT CCTTTTTACCTAAGCTTCTCTCAAAGAACAAATCTACTACTTCTAAATCT ACGCTATTTTTGAATATGAAGTTTTAATATTTCTAACAAAATATCAATAT ATCTTTTTGGTAAGCTTTTTAAATTTTTAAATTTTATCGGACATAAGCTC TCTGCTACGTCGACCAGTTATAGATACTTCGGCCTTGATTTACTACAGTA TTAACAAGTTTACGTAACATCTTTACTTTAACATTGATTTAATATTTAGG AGTTCACGTAACACATACAAAGATACGTTAAAATACCTTAAAATGCGCGT TATTCAAATCTTTAAAATCATTTTGATCCCATTATTAATTAGACTAGCAA ACTAGTCTGTTAATTAATCATGTCAGAGGGTGGGAACATAAAGGCGGCGG GCGTTTGCTAGAATAGGAGCTGCGTAGGAGAGCGAACAAAAGTTGGTGAG AGGCTGCTGATTAAGCTTTCAGCCCTTGCCGCCGACAAAATTTCTTCTTA CGCTTACCTAACTCCTACGCTCACTTTTCCCACGTGATACCGTTCCAGCC CGACTGGCGTGCCAGTCTAATTATTAATATGCTGGTCCACTCTCTTTTTT CAGGTCACGGCAAGACAATCGCCAATAAACGAAAACATATCCGTAAGTTA GTACCCATTCCCAATTTTTCACCATTTGAAAACATTTTGGTATTTCACAA CCATTCAGGATATCAATTTTTCTGATTCTTTAAAAAAATAAAAGTAAATT TTCCCACTATTTCACTTTATCTTGAGTTATAAAGCAAAAAAGTTTTGTTT TTTACCAAAGCTGAGGCTACAGGCTGGTGTTTTTAGGCGATTTGAACTGA TTTTTTTGAAGCCACTTTTGTAATTTTTTAAGCGACATTTTTCTAGCGTT ATAGTGTACTTACTGATAGCAGAAAAATTTGACGTGCTACATTTTACAAT TTTTCATGCGTTTTTACAACGCAATGTGAATGGCATTGCAGCCTGTAAAA TCGTATAAGTGTAGTCTTATTCTTATAGTATCCTTATCATTTTATTTTGT AGACCACAAACCAGAAGCCACCAAAAATGCAGAAGCAGCGAAAAAACAAG GTACACTAAATTCTTATGTTGTTAATGTTAATATACTCAACCTCTTTATA ATGAATTGCTTTAAGATTTATATCTGTTGGTGCTTTTAAGACTTATCTGT TCTTCATCTGTTGGGAGTATTTTTTAATTTCAAGAAATATTCGATTCCCA ACTATCTTTCCTTTGTATCCATGAATTTCTATTACTGTAAGCTTCCCTAT TCTTAACAGTCAAGATTACGTCATTCACAAACAGGATGAACTGTTTTAGG GAACATAAGCTTCCATCCAAATTCTTTCCAAACACTGTTTCAAATAGGAT AAATGTCTTGTGACTTATGTATATCATGATATAATTTTTCTTGTGGTAAT GATTATCTGTTTATTACTTTCTCTAGATATGTCATTCAATGATGAGATGC CAGGACAAGAAATGAACGAGGGACCAGTTGGTGAGTTAGTGAAGATTATA TATAACAATGATGCTGGCTCGTTTTGGACCTTCTATTACATTACTACACT CATTGAGTTTAAAGGGGTAGAAAGTCTTTCACAAGCGAGAAAAAGTGAAG TCTTAAGATCAACGCTGCATTTAGAATGAGGGATTGAATCTAGTGCTTTT TTGTTTTCATTCAAGCACGCATTTTTTGAAATTTGGCGATAAATCCGGCA TTTCTGTCATCCAAGAGTTTCGCATCCATTGCGGCTTAAAACTCAATTAC GCCTGAGAATGTTTTATTAAGGTTGACATGTTTTGGACATGTTTTTCCAT TCTTAATTTAAGTTATCATATAGATTTTTGATTAATTACTTTCTAGGTAA AGTCCAAAATGCTGCTGGCGTCGAAGGTTTGGGCGGTGAGATGAATGGTA TCCCAACCGGTATGGGCGCAGGGGCGGAACCATTGGGCGCATTTGAAAAT GAAGACACACCACCTGGAACAGAAACACAACCTCAAAGTTTGGGCGAAGA CCAACGTACGTTATTTTATTTAACCTTGATAAGATATACTTTCTAACTCT ATGGCATGGGGAACAGGGGGGTCGATAGTAAAATCTCAGACATAATGACG TTTACTACGGTGGTGGTGTGACGAGAAATAGAAAAAAACTTTTACTACCC AGGGTAGTTAAATACTAAAATGGGTGGTATCTATGGGTTAAATGTTGAAA AAATTTACTACCTGGGTAGTTAAAACTGGTAAAATTAGCAAATTTTAGCT ATTTTTGTAATTCTTTTAATTTTTTGGATGGCTTTACTGAAAAAATCTTC TGTTGGAAAGTTGTTTGCTGCAAACCAAAAATTCTCGAAATTTTTTGTCA ATATAAAAAAGACTTTAATTCTATGGGCAAAACATTAATTTTTGCATTAA GTGAAAAATGTGTCACAGAATCATTTTTTAGCTTTTTTTGTAAAATCAAG CCGAAAAGCAACCGAAAAATAGGTGGTCTCCATGACAAATTGTCCCGAAA ACTTTTACTACCAGGGTAGTAAAATACCTCTTCCAAGAGTCTGGGTGGTG GTATGTAAAAATTCATAAAAATCCTTTTACTACTCATATATGTCTGAGAT TTTACTATCGACCACCCCCCCTGTGAGGGATATTATTGAAATTGAAAAGT CAAAACAAAGAAAAGCCAAGGTAGAGTTTAAAATTTATAACAGAGTGTGT TTCTTTGAGCCATAACCTTATAAGGAAATGAATTTTTGCCCCCCCCCCCC TACGCCTCTTAAGATCCACCATTTCAATAATTCACGGTAAAGAGATGAAA TAAAAATAGATTTTCACCTTCAATTCGCCCGATAGTCACTATAGTCATTT GTAGAATTATCCTTATTGTGAATCACACTCTCATTTTATATTCAGCCAAT GGACTTTCGGAATCAAACCTTGGTGAACAAGGAGGAGCTGGAGAAATGAC GAACGAAGCTTCAGTGAAAATGAAAGCACCCGCAATTTCTATGTCTCACT CATTAGACGATCTCGATAATTCAGTCAATATCCAAGGCGATGGAGAAATC GGTGAGTACTTGCTGCCATTGACTTTTGATCTGTACAAACCAACATACCC TCTTATTGGGATGATGAAATGATCAAGGGAAAAGCTTTATAAGATTACAA GCAAGTGGAATAATTTTCTGTTTTGAACACTATAAATTTAAACAATGTTC ACTAGTTTCCAAACTTGTTAAGACCTAGGTAATCTTGATATCCAGGCTGT ATACTTTTTTTTACTTTTTTTAATGTTTCTAGTTTACCGCCTCGTCTTCC TTAAAGCAAGCTATATTCCAATCAGAAGGTTATGCATAAATTAAAAATCA GCCTACACTGTGTTCGCCAGCATCTAGGAAACATTTAAGTAAGAAAATAA ACTACAGCTTTGATAACCAGGCTAGGATCTCAGGAATAAAATCTATTTAC TCTGAATATACGAATTAATATTTCCTTTCTTTCCCTTTAGGAAAATATGT TCGTAACTCCCGACAAGGAGGTATGGGAACAGGTAGCGAGAGTATGATTG GTTTGGAAGCGAAAGACCCTCCTTTCACAGGACATGGCCCTGAGGATGGT GAGTAAGTAACCTCTCTTTGTTTTTGTTTATCATAGTTTGGTAAATCAAT TTTGAACGTCAACATCGATGGCAAAATTGCTTAAATTCCTTATTTTGTCC ACATGACACCGAAATACCGTCATTTTTTCTTCAAACGCCGAACCGCCGAC AGAAGAAAGGGCCAATACCGTCACATCGTAAAACCTGTACAAAGTCAATG TCCCCTTCATAAGCTCTTTTTATACCCTTTTGATAAACCCGCTGGCAGCT AAATTAAGCAACTAGAAGTTCGAATTTAATATTTTTGCAGATGCTGAGCC TGACCTTTCATGTCAAAAAAGTCTCGAAAACACTGAAAACACTTTGTCCG AAACACTTTTTCTGAACCTTTCATGCTTTTTTGGGGTGTTGTTGGCAAAA ATCATTTCCCAGAAACACCTTACCTCTCGAGGTGGTGTGTTTTCAGCATT TCCTGTGTTCCTGGGATTTTCATAAATCAACTCTCAATTTTCTCCATAAA ATCCAAGCCAAANTCTCGAGGTGGTGTGTTTTCAGCATTTCCTGTGTTCC TGGGATTTTCCTAAATCAACTCTCAATTTTCTCTATAAAATCCAAGCCAA AATGCATTACCTGAAACACCGGCAAGTTTCTGAACCATTCAGTGTTTCTC TGGTGTTCAAGGTGTTTTTCAAGACGATTTTGAAGCTCTTGCCGTGTCCT TTCGGGACCAATCAGATAAAAATCGGGTTTAAAATCGGGTTAGAAATCGG GAAAAAATCGGGGAAAATAGCCAGTTGGGACTTTTTTTAACAGTCGGCTT CAACAGGACATTCGGTGTTTCTAAAAACTTTTAAGACTGAACCATTCGTG TTCAAAAGTGTTTTCTGCAAACCGGGTAAGCAGTGTTTTTTTAAAGACAT GAAAGGTTCAGGCTCGCTATAATATAATATTTTCTAAATTTCTTTCAATA TTTCCTTCTCAGAGGAAGACGAGACTCCATCAAGAAGACATCTAGTTAAA CAAAAGCCCAAACGCAAGAAGAATTCCTGGAAAAAACCTTTTAAACAATT ACAAAAGAAACAACAATAAGACACGTTTTACACCAAGGGTTTTTATAACC TCAACAGTAAACTTATATTCAATTTTAGCTGACTAATTTCGCTTGTATAA TGCAATAGATCTTTAACTTTTTGTTAATTTTTTGTCTGAAAGATAACACA TTTCTTCCTATGGAGGAACTATTACACACCGTAAATTTATATAATGTCGA AAACTCCTACCAGTTCCGTCACTCTTCCTTGGACTTGGAGAGTTTATTTT TTGATTCTGCTTCACACATTATCTTCATTCCTTCTCAAAGTGATACTTCG GCAAGTTGAAATGTTAGAAGCTGTGTTTCGATCTTTTGTTCCACCTTTAA AAAGCCTCCAGACTTTCTTGTTGCATAGATACAAAATGCAAACGAAAATT CCCTTTAAGCTTCTCACCAAGACAAACAGAAATGAAAAAATCAAATTCAC TGTCATCAATTCTTTACCTGGTATTTGTACATAGCCAATGATATCAATCA AACCCAACCCAATAATCAACTTTAAAGCAATTCTCACTAAGTCAGCATTG GCTTGATCGGACTGTAAAGTTTTTCTTGTTTTTTTCTTAGCCAAGTGTAT TTTGAGCAGAGTTTTGGCTAAGGCCAGAATGGATATCAAATGCATGACAA CCATTGGAGTGATAACAGACCACACCCTTGTGGGGGTATGTGTGACCCAG CACATTTTATCATAACCAACGTTGACATTGCCAGCCTCGTTCAAAATGAC TGCAGGGAGTACGAAAAACAAAGGTAAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006073TCONS_00006073Clytia hemisphaericatranscript
TCONS_00006072TCONS_00006072Clytia hemisphaericatranscript
TCONS_00006071TCONS_00006071Clytia hemisphaericatranscript
TCONS_00006070TCONS_00006070Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00006072-proteinTCONS_00006072-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000062supercontigsc0000062:430112..437041 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.11 0.03 0.12 0.03 0.93 0.44 23.73 25.03 13.98 8.99 35.18 51.45 73.8 61.08 49.29 126.07 67.09 66.95 0.53 1 33.5 36.31 37.12 31.07 51.65 52.06 5.98 1.65 0.23 0.51