XLOC_003430 (gene) - C. hemisphaerica

Overview
NameXLOC_003430
Unique NameXLOC_003430
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000062:383943..388034+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003430 ID=XLOC_003430|Name=XLOC_003430|organism=Clytia hemisphaerica|type=gene|length=4092bp|location=Sequence derived from alignment at sc0000062:383943..388034+ (Clytia hemisphaerica)
TTGTACTACAGGTAGTTTTATGCGCTGCAGAAGTCCATCATTCCCAAAAT
CAAAGCTTGGCGTCTATTCCTGTTTTCAAAGAAATCGAGCAACTTAACAG
AGGTTGGAATGGGTTATTCGAAAAACGAAATCAGATCACTTATAACACTT
TAACAGGATCTCAACCTTTGCACCAAACCAACGCCGACAAGAGAACTTCC
AAGGCAGATCAGAAACTCAATGAAAGTATTCAAACACTCATAAATACACG
TCTTATGAGAGCACAACATGCAATGAACCACTCCATGGACCGAATGGTCG
ACAAATTGCTTATGAAGAACGCTATCAAACTTGTCAAAAGAGCACGCCCA
TCACGCCCACTTAATCCACTGAGCCGAAACAGTAATAAAATAACTGTTGG
TAGTAAAACCACCTCGAAGCAGGTGGTCAAAAGAATTCACAAATCACGCC
CAATTGCAACTTCAGTTGANCCACCTCGAAGCAGGCGGTCAAAAGAATTC
ACAAATCACGCCCAATTGCAACTTCAGTTGAGAAAAATCCTAGTGCCATT
ACtaagaacaatggaaaaacaAGGCCCCGCGCCTATAAAATCCATGATTA
TATTATTTCAAAACATACGAAAGCATCACGACACCTGCACAAGTCGCCCA
AAGGAATGATCGGTGTCCGAAAAAAGAAGAACGTTATTCATAAACGTTTT
CTCGGACACGATATGGTAACAAACCACAACAACCAAAGATTGGAATCGAT
TGAACCTCTTGTCATAGACATAAAACAGCAAATTTATTCCGATTTagcaa
aaagaaatcaaacacTTGACGACGACTTACTTGGCATCAATGAAGAGATT
AAATCGTATGATCCCACTGGCAATGTTATTCGTGACAAACTACTGGGTAT
GTCCAGGGAACAGATGTTTGCTACTACAGCTAAGGataattttgatattt
cgaGCAAGGGAGGAAAAAATCAAGTTGCTTACTTCATTGGAAATCTTGCT
TCGAATGATGGTGCCTCGACAGGATTGCCTGGTCCTGAAAATAAACGCTT
TTCAGATTCCTCGTTCTCTAAAATCCAAAGACCTTTTGATGCAACAACaa
gaaattttgtttataaTAAAAGAGATCCTTTCGAAAAAAGAGGTTTGAAT
CAGAATCAAATTGCTCTTCCAGATGTGGCAATGTTTCCACTCTTTTTACC
TGGAACTGCACAAGACCTGAAACTTGATCATGGTCCCCAATCATCGATCG
ATAAATCAGCTACTGGAGAAAGAACTGGCCTTGGAATAGGTATTGCTTTA
TTCTAAGACATTATGTATTTCAATTAAGTCCAAGTTTCAATTATGTTcta
ataaagtttttttaatctCACCGTTTTGCGAGAACTGTTgtgcaattttc
taagaaatgggATGTTTTAGAGTCGATAAAGCCCTCTTGTTTTTAATAAT
TTGGTCATTGAATCCTCATTTATGTTAATATAATTATgtctaaataataa
aaaaacgtttaattCCCTACCAACAGGAATGCAGGATTTTTCGTACCATC
ATGATCTCGATGCTCCTTTCTTCGGTAATCGCGCTCACAAAGAAATCTTG
AAAGTGGAAAACCCATTTTACCAAGATGGTGGACAATCtcaaaaagaaac
atttaaagTTGACGCAAATGGTTTTTCCCTACAAAGTGAAGGAATTCCAT
CTCATACAGGTAAATGTTAACCTTACATGCACTCGGACGATGTCTGCGAA
TTTAAAGACCAGGCTGACCTCTGAAGATCTTTCTTCTTGTGGGGTGGTGA
AATTTGACTTACGCTGGACACGCCATAATAAACATATCAATTTGATCAAA
ATAAGTTTCAgtttatcgacccagtgatattcaAATTGGAAGTTTATTGC
GGCTTTGATCACGAGAttatttacgtttggctacgtttcgagagattctt
ctcccatcatcggacACCAATAAGTTAAATCTAACTCTATTgatcaattt
tcatttcagatTCGACCAAGCAAGTGTCAGAGGAATCAATATTTGGTCAC
ATCACTAGTAACAACGAAGAAGCTGGAAAGAAAGATATTATCTTCAAAAG
AACTCCAGGtatgaaaatattcaatattttgaacagaagaaattttcatt
tgtaATATCTAAGCAAGGCtacgcattttttataagaacaaactatatta
gatttttttagattttcgaTTTGTCTCGATGGccaaaacatcaaaaattt
taaaacttttttaagatttcacgGATTTTTTTAGGAAATCGCGTAAACTC
TTTTACAGCTTAGCAGGGACCTGTTATTACTTGGAATTATAGAAAGACTC
AAGTAATGGAATTCGGATCAACGGTATTCAACTCTAGTTTGATATCTTAT
AATAAATAACGTGCCGTGAAGAAACTATCGACTTTAGATTCTTTAAAATT
TCGACATTTTGACATATTTGTACAGATGAGCCCTTCAAGTTATCGTCAAA
TGGTTCGAAAAGAATGTTATCTAAGAAAGACCAAGCAGGTATTACATATA
AAACAcccgtctcacagccccagtggaactttttcctctgtaggataaaa
attcctattgaaatcccaatggggatagaatttctatttctataattgtt
caaaagttaaatccagtggggatggttttggagtgcaatttttaaacatt
taatttcgagtggggatgaaataaaaaaataagtcaatttccctgtgggg
ctaaaattccagggtattttcctacgGTTCCAATGGGGCTGGGGTCCcgg
tgggtctgtgacacaggggtgttataggGTGTTATAAAACCTTCCTCTca
atttcgaactcattagcaAGAATACAAGCTTTTATATATCTGGATTTTAT
TCAGCGAGCTAGCATTGCGATTGCACTGGAATACTTTTGGAGCAGCTTTG
GATGCTTTTAAAGGTTATTATGATCACTTCAATGGTTGTGAGTAAAACCT
CCAAATCCATCTTTTTCTCTAATCTTCTTCCTAATTCGAGATATTAAAGT
TACAAGTTTTTACATTTTAGCAAGAAAACAATTTAATTTTGACGTGTGTT
TTTTTaacccattttgaaatttcgaattgTCCAATCTTGTCTGTTAGACA
AAATGATTTGGATAGGCTTCACTCACCAGGAATATGAAAGGAAATGAaga
tctcaaaccatctgaatATCCCTTCGAGGTTTCGTACGTAGATTGAATGA
TTTCAACCATATATTTTCTTGAGAGCAGAATCAGACGAAATATACGAGAC
GAGGAACAAATTGAaagaacttgaaaaagaaaacgagaaattgaagaaga
aagtaCAAGAAATGAGTAAAAGTGTTGCTCCTTCAAACCACCATTTGTGA
CCAGGTGAACCTTTTTGAAAACCAACAATATaccctagtctgaatcgcat
aTGGAAAAtctataagaaactcttttgTTGGAGGTTGAGCAAACATGTCC
CCCGTCACCCGGGGGGGCCAGGGGGCCATGCCCCCACCAATAATttataa
aatacttttttttacttataaaatatttttcatagtgCTAAGCTTTGAAT
TTGAGGAGCTTATCGTGATCTGTCTTAGGTAATCTGTGAGATTTCCATGT
CTCACTAAATATAGCGTTTAAGGGGGTAAAATAAGagtgaaaatcaaata
ttttcttcgtcgcccagccatggtgggcgacaaaattttttggccccctc
aataTGATTCACACGCAGGGGGGCATGGCAGAAGCCTAAACCCATCTACA
CTCAAAGATTCGTAGAACTTCGACTTCATGATAAACAACAGCTCTCAAAA
CGCCTTTATAAAATTTATCTCAAGTTCTATCCCCCAACGcacattataat
tttttttcctgtttCTATTCAGGTTATATGGGTGTGGCTGGCTGGGTGTG
GCAGACTTATGGTGGATTATCATTCGAACATAGAACATTGAACATTTTTc
taattaaaagtttttcttttagtaaCCAGTAGTAACAGAAGTAATTTTGT
TAATTGCTCTGTTCACTTGTTTGTCTGTTTACGGtgtttttc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006006TCONS_00006006Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00006006-proteinTCONS_00006006-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000062supercontigsc0000062:383943..388034 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06	0.19	0.05	0.09	0	0	5.77	6.07	1.39	1.65	4.64	0.63	0.21	0.03	0.84	0.69	0.55	0.54	0.07	0.05	0.06	0.06	0	0.04	0.11	0.16	0	0	0	0