XLOC_003268 (gene) - C. hemisphaerica

Overview
NameXLOC_003268
Unique NameXLOC_003268
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000059:246881..253737-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003268 ID=XLOC_003268|Name=XLOC_003268|organism=Clytia hemisphaerica|type=gene|length=6857bp|location=Sequence derived from alignment at sc0000059:246881..253737- (Clytia hemisphaerica)
GAAAAAGAAATAAATTTGAATGAAAATGGAATGTTTTGTAGATGAACTTG TTTTACAAATTTTCAAAAGTTTGGATGCAAACCACCTCATCAAAGTTTCA GGTGTTTGTAAGAAGTGGTACGAAGTTTCCAAATCACAATGTTTATGGAA AAAACTCTTGTTGAAAAAATGGCCATCACAGGAATGGCTTTACGATAAGA TTCCAGTCAATGGTTTAAACTGGTTGAAAATTTATAAAGAGTTTGTTCAA TATGGATGGTATTCACCTGATCATATGAGGTATTTTGTTTCTTGTAATGC GATCGAGGATGAACCAATTTGTCCTGAACTTCGTGAGGTCTTGTTTCTAA GAATGTCAAGTATCGCTCAAAAATGGATGAAAGTGAGCTCACGTGATCAT GATATGGACATCGGGCGCCATTTTGATAAAAATATGGAGCTGTTTTTCAA TATACATCAACTTGAATGGTGCTTTTTGGATAAAAGACGAGGTTATTTGG ATAATATTTACGGGCGCAAATCACGAAAACGAACAACGAGTAATAACCTC GAAGATTTTATTCGACCGTACCAAGTTATTCCGAGTTGTTTACTCATGTA CCGATTTTTATGTATGTTCCGGTCATTTGCTGTACCAGAGACCGGCTTAA CCTTTTACCGCATTTGGAGATTCCGTTTGAAACATATTGAGACGGGAATG GTTTTTGAGTTGTGTGACTGGAAAGCTGCTTCAAGTAGCACCTTTTCAAA TGGACGACCCAATGTCGGTGTATTTCGAGATGATGCTTTGGAGCTATTAC AATTTATCACTCATCCACATTTTATTATGCATCCGCTTGGCTTGAACCTG CGTATCGAACGCTTATTTTTCTACGCCATTCGAGCATCAGCGGGAGGGAG CGTCAGTATTTTCCCTAAACGACAGAAACCAACCAGCAAGAAACGCCGAC ATATGGAAGCTGTTTCACCACGTGTTCAAGCTGCGCAGGCGTTCGGAAAT CAACTCTACGAGAAACCTATGTTCCCTGATATCGAAGATAAGCTAGAACG ATGGCGTGCAAGGCGGAAGGCGCATCTATTGCAACCACCCTCACCACGCC CGACGCAATCGAACACCAATCCGTTCGAGTCAATGATGTCTCTTGCAGTC AGTACAGGACCTTCATCACGTAAATCAAGTACAGGAAATATGTCAAACCC GCCCTCCGCCCCTTCAAGTGCACCACCCAGTGCTTTTTGTTCTGAAGCAG AAACCGAAACGGATTCAACTCGAGAATTCGGAGCTAGTGATACCGATTCG GAATTTGATTTTTATGAGAATGGCTATGTAACAAATTGTGAATATTTCAT CTCGAATTCCGAAAGTTTTGATAGTATAGAAGAGCAGCATTCAATGCAAG CTTCCATTTCCGATTTGTGGGAAGTGACGTCAAAAGAATGCACAGAAAAG GTTTGTCTCCCGATATTTGTATGGGTGGTTTACTGCTTCGTTTGATAAGT AAGCTAGGATGTAATTTTTTTTTACTACCTCCGAAATACAGAACTTTCTG GGCTTCGAATTGTGAAAAATCAGTTGTTAAAAACAGAAGTTAAATCAGGT TACAATATTAACAACCAAGAACTTAACTTGATAGCGCCTTAAGTCTGTGT TTACGCGTCCATTTTTTCCACATCATATATTAATTAACACGTTTTAATAT TTAAGAGAGTTTCAAGTGATCAGGGGTAACTTTTATCACTTCAAAAATTA CGCTCTTACTGGTCACCAAGTTCAGTATTCAGGGCATGATTTATTTTCTT GTTCGATTGTAAATCTTCACCTATGAAAACAACCTATATATCGCAGCCAG CCATCAAGATTGAACTTGATGGTAAAAGGGAAAAAACAATTTATGGGAAA CAAAAAAGATAGTGATTCTGATTTTCCTTATGAAAAAACTCAATTTTGGC GAGGTAGCATTTTGTTTAATTTTGGCGGGAAAAAATCTTGGCAAAATTCA CCAAAATTCAATGGTGGAATTAAGACAATAGAGCAAATATGTCGGAAACG CTCGTTAAAAAAATGAAATTACAATTACAAATCTCTTCCGTTGGTAAGCC CGACCATTGAGTTTCAAGCCCGAAGGGCTAGAGGTCAATCTCTAACCTTT CTCAGGCAAGAAAAATTGAAGCCTTAAAATATGCGCCGTATTTTTGATGA CGGATTGAATCTAGCAATTCCTTTGTTTTCGAGTGATATATTTTTCAAAA TTAAGCGGTAAATTTTAGTTTCAATCTGTTATTTGTGTAAAAAACAGGCG GGTCGCTCAAGGCCGCGCCACTTTGGTAGGATTTGTTGGCTTCAAATCCT ACCAAAGAGATTGCCTTCTAGCCCTTCGGGCTTATACTTCATTGATGGCG ACNCCGCGCCACTTTGGTAGGATTTGTTGGCTTCAAATCCTACCAAAGAG ATTGACTTCTAGCCCTTCGGGCTTATACTTCATTGAGCCCGACGTGATCT AAAACCGCCTATAAAATTAGTTTTCGCCAAAATAAATTACCCTTAAGGTA TTACAATGTATCAGCAACCACGTCATAAACCTTTAAGGATTGACTCTTTT TTTTTCGTTTTAGCTTCCAGTAATATATGACATCGAAGATGACAATTGGT ATTTCCAAATGGAAAAACAGTTCATCCCTCATCATCCTCCCCAACTCGCC ACCATTTCTCTCGCCTCACCCCAGTCTTCCAATATCAACCAATCAGTTCA AGACTTACGTTTAGTGCAACCGAAACGTAAACAGCCCGCTTCACCACAAC TGGACGCGCCAGGTGTTTCGAGCGGACACTCTCGGCCGCCAGGTTATTCC GAGTTTTATTCGCTGTATGATTTGACGTCAGATATCATTGAACCAATTCC AAGCTCACTTGCTTTGTACAGGTTTGTTTCTCAACTAGCTAACTAGTCTC TTTAATTAATCATGTCAGAGGAACATATGATGGCGGGGTTTGCTACGTAG GAGATAGACATAAGTTGGCGAGAGAGTGCTGACTAACAGCTTTCAGCCCC TTCCGCCGACAAATTTTTTTCCTACGTTTACCTAACTCCGACGTTCACTT TTCCCACGTGATACAGTTCTAGCCCGACTGGCGTGCCTGTCTGCTAGTAT GTCTCCTTTCTCTCCTGGCGGTGAAAGCTGTTTCAGTCTTCCTTTTAACG TCCAAAACTTCCTTTGTCACATTTAATTCATATCAAAAATGTACCTTCTC CCATTCTCACTGGGGGAAACGTCAAAATGTTTGCCATCACAATTGGATAG TTCAAGTTGTAAGCAATAGAAATCTAAATCCCCGCAAGTTATTTATTTTC TATCTCCAAAGGGTATTAATTTCTTTCACTCTACTCTCACTAGCTTAAAA ATTTTTAATCTTAACGATACCATTATCAAGGACTTACTATACTGTGCCAA CACGTGTATATGCTCATTGACCTCAGTTTGACAAAACCGAAAGTTCTCAC CGGGCCACCGCGGGGCACTAATGATGTCTTTGGAAAATGTATCAAGTTTT GATCAAATCTTTTTCTTCTTCATCTCAGGTTAATTTGTTTGTTCGATTTC AATTGTTCTGTTTACGTTTGTTTGGATGACGTCAGCGTTTGGCAAGTCAG CATGTTGCACAAGAAGACCAGAGGTGTCATCCATTTCAAAGATTACAATG GTCAGTAGAAAGTTTATTTACTAGTTTCTGGATTTGCACTTTTTAGGACG GTACATGGGCCCCGGCGAGCCATTTTGAGTGAGAAGGGCCAACATTTTGG AAAAAAATTGTCGCCCACTATGGTTGGGCGACAAACAAATTTTTCCACTT TTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNCCCCCCCCCCCGTTGACGGGGCCCATGCAGTAGAGTGACT AAAACGACTTACACAAACTCGCTATTATCAGGGATCGCTCCAAGGGGGAA TAGGAAGCTTAGATCCTTTGCTAGGGGCGTATTTTTGAAATATTACCATG ACTACGATTCTACTATGATGTTTAAAAACCTCTTGTGTAACATCAGTTTA ACAAGGGGTTATAATAGGAGTTTTCTCCCTTCGACCTGAACTGTTTGTGG TATCTTGGTCACAATATTTTGTTCCTCCACCCAGATCCTAACTTACCGGA AATGTTTGTGGTAAAGCCGATTTTTTGGCCCAAAAAGTTAAGGTTCTCTA TCTTATTGTGTAAAGTCTCTGTCAAGGAAACAAAGGACACATCTAGTATC GTTGCCAATAAATTATGACACATTTTCGGTAGTCTAAGTTGGAAACAAGA CAATAGCCTCCCCCGCGCCTCTGAGCAATATCTACATGAAAGAAAGTTTG CTTGGCCGGTCCGAATCCCACCCTGACAACTTGTCTGGGGAGGGGTGAAG AAATCCAATTTAAAGGTACTGTGAAGTATTGACAACGATTGTAATACACT CATTTTGTTTTATAAGCATACGGAAAAATCAGGTCGAGGCTCAATATGCA AAATCTCATTTTCAGCCTTAATTTATGGCTTCAATTTGTTGATTTTCTTT GGGTTCATGAAAATGTCGAATTTTTAAGTCGGAACATTGAGAATGCTCAA AGAATGAATTTTTTTTTAATTTGGCGCCGCAGACGACAATCTTTGGTTTA AGAAAACTAAAACAACATTAAATGTAACCCTAAAACCGTCAGCGTTTTAA AAAAGCTGCACGAATTTTTTGCATATTTCAGCTTTGAGCTATGCATTATG CTTATTTTTTACCGAAACTGAGCCTAAGTATGTTATAAACGTTATGCTTC TAAAACAAAATGATTGTACTTGTGTAATAATTAATCTAATTAAGCTTTTC TTTTTTTGCATAGCTTGATTCATTGAAAAATGCTTTGCTTTTATCTGTTA TTTTTTAGGTTCGTTCCGTGTCGCTGTATCGTTACCGGAAGCTCCTCTTC TCCCTGAAGGAACGTCAAGCGAAGATATGGAGCGCCAAGAAATTTTCGCC ATGTTTGATTTATCGGAATTTCGTGCGGCCGTTACACAGCTATTGGACCT CCTGATGAGCGAGAATTTTTGCCACCCTTATGGCATAATTGCTGGTACAG TGGCCTGAGAATCGAAAACTTCAGACTTCTTACCCAGTTCCTTAGCCTGC TTATTTTTATGATCCTGCTCATGAAAGCTACCACTTCTATCAGTAAAATT AAAAAGAGGCCGGGTTCCTCTTTTTACGATCTTGCTTTTGATCATTTTGA TGATAAATTAATAATTAAAGACTTTTAATGATGTGTGGTATCAATTTATC ATTTGAATATATCGGACAGAAAATTGGACGTCAATATCGGATAGAGAGGA GACAAAACCATGGAATTACTGTCTTCTATTTTATCAATTTTATGATTCGA TTCTTTTATTTGGATCGCTAATTTTCTATGTTTTGAGGAACTAATGATGA GGTCACAGGAAGGATTTTGATCATTTAGTGTTTATAAGGCTTTCAACCAA AAGTTCGACACTCAGTTATTTTGTATACCTGTACACCCCAAAGACCTGGG GACTCACCCCAGTGAGAAAATGACCCTAAAACTTCATCTCCTCAAAGAAA ACCACTATAATCAAGGTTATCACACAATTTGGAAGCGCTCTAAACTTGGG TTGGAAGACTAGAGTTTTGACTCTGAGTTTAAACGCTAGGACCTGAGGAT CCAAAAGTTTTAAAATGGTCAATTAAGGCTCAGAATATAGCCCCGAACTT CAAATTTCGAAAAACGAGGAAACAGCCAAAGTTATCAGTATATTTCGATG TAGATTGGAGATTAGGAATACTCACTGGGTTTTTGATCAAGAAACAAGAA TTCGAATTATTTCCACCCATTTCAAATAAGAGATTTAGCCCATTTAGCCC TTTCATATTATCCCTGNATTTTGACGTAGATTGGAGATTAGGAATACTCA CTGGGTTTTTGATCAAGAAACAAGAATTCGAATTATTTCCACCCATTTCA AATAAGAGATTTATATTATCCCTAGTTTTGGAGAGGGGTATATCTCATGA ATTCCTAAGAGCTCTTAAATAAATGCCAACAAAGAAGCGAAGAAGTCATT AATGAGAACTATATTACCGTATTACTTCGAACAAAAGCGAGTTTATATAC CTGTGGTAAGCCTCTAATTTATCTACATCCCGTCTGACTGAGGACGACGG TAAACAAACACTTTAACCGTCCTCGATTTCGCGGGTCAGAACAGTTAGAT TTTCCAAATCGCTTCAGTCACTCCGCCGTCCTCAAAAGTGCAAATACATG AACTCGCTAAACACCCTTCCTTTGAGGAAAATCTTCAATAAACACCCTCA CAAATAAACTCCCCTTCGAATATAGACTTCCTCTCAATGAGATATTCAGT GAAGTCTTTGGTTATTCCATACTTTATATGATTTCACCCAAGTTCGTTTC TAAACTAAACCTATTGAATAGTTTTAATTGTTTTATCTTAAAATCATGTA TGTATTTTATTGTAAATTGCGTGTTCAGTTGAGTTTTTCTGTATGTATTT ATATTATTGTAAAAATTATTTTTGAAGACTTTTGTATAAAAATACGATAA AAAGAGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005757TCONS_00005757Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005757-proteinTCONS_00005757-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000059supercontigsc0000059:246881..253737 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.86 2.01 0.98 0.9 2.65 1.73 2.49 3.11 2.4 2.79 3.04 2.76 4.67 4.75 1.88 2.41 6.34 7.41 5.63 4.65 7.22 7.3 4.1 5.75 5.95 7.09 2.28 1.62 0.72 0.88