XLOC_003117 (gene) - C. hemisphaerica

Overview
NameXLOC_003117
Unique NameXLOC_003117
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000053:561560..568813-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003117 ID=XLOC_003117|Name=XLOC_003117|organism=Clytia hemisphaerica|type=gene|length=7254bp|location=Sequence derived from alignment at sc0000053:561560..568813- (Clytia hemisphaerica)
CCAACTCGAAGCCATCTGCGAACAGCACCATCGCAGCCACCATTACGCAC CACCTTTGCACCACGCCCTACCACAGTACCAACTAAACATCACTTAACTA CTACCCGCCCTACTTTACGCCCCAGCCAACCTAATAATCAAGGCAAGTTT TCAGATTGTAGTAAGTATGATTAAAACTTTGATAACATTTAATATTAACA TTGAATTGTTAAAGTAAAGTCTTGGTCAAGGTGGTCGATGTTTAAAAATA TAATAATTGTTAAAAGATATGAATTCGTGATGATCCTATAGTATGACGAA TTGTTTTATACGGAAAAACGGAAGCACCCAAAGTTAGTCTGGGGTTTTTA AATGCACTCCCGCGAGGTTAAATATGAGGAACAGAAAATGGAAAAGTCTT ATACTACGTTAACCTAACTCCTACGCTTTATTTTCCTGTGTGATACCGTT ACCGCCCGACAGTCTAGGCAATTCAGAACACTTTTTGGACCTACCTAAGG TAGTCCTTTAAATTAACCCTTGTCCGTTCGTTCGTTCGTTCGTTCGTTCG TTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTGCCAGCTTTTCTCGGG ATCGGCTCATTAGTTTTTTCTAATATTTTGCACAAAAAAACTAATGCCAA AAATGGCGGAAATATGCCGGAAAACTGGTTTTTGGGCATTTTCTCGAGAT TTCATCATTAGTTTTTTCTGATTTTTTGCTCAAAGATGCGTATTAACAAT GCCCAAAACATGGCCTAGTCCGATTCTTGAGAAAAAANNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNAATAAAATTGATTTTTGAAGCCGGAACTTTCTAA AAATCACCGGAACAGCCGATTTTCGCCGGAAAAACGGTATTTCTTGAATT TCTTGAGCTGTACTTTATAAATTTTCACACTGATGCAAAATGTCAATACC TAAATTGTGACGGAGCCCGATTTTCGAAAAAAATTCAATTCCGGCCGAAA ATGCCTGAAATATGCATTTTCTCGAGATTTTATCATTAGTTTTTTCTGAT TTTTTGCTCAAAGATGCGTATTAACAATGCCCAAAACATGGCCGAGTCTG ATTTTTAAGAAAAAATTTTTTCCGGCGGAAAATGCCTGAAATATGCATTT TCTCGAGATTTTATCATTAGTTTTTTCTGATTTTTTGCTCAAAGATGCGT ATTAACAATGCCCAAAACATGGCCGAGTCTGATTTTTGAGAAAAAATTTT TTCCGGCGGAAAATGCCTGAAATATGCCGGAAAAACCGGTTTTTTAACAT TTTCTCGAATTTTCATTTTTATTTTGTTCTGATTTTTTGCAGAAAGATGC GTATTCGCAATGTTCAAAACATGGCCGAGAATTTTTTCCGGTTGAAAATG CCGGAAATCGCCGTTTTTGCAGATTTTCATTGGATTTTTTCCTTATATTT CTATGTTTTTCACACAAAAACATTATTGATAACAANNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNCCCCCATCAACAATCAATGATGAATTTATTGCGTTGT GTATTTTCGCTAAACGCTATATTTTCTGACTGATTTTTTTCATTTTTCTT CTCGCATTGCTTTCTCACTTTCATCATCAGGTAGGTCCATTCAGCATGTT GCTTGTTTTTTACTAGAATCGATTTTTTAGATAATCATTTATTCACTGTT TTAGATTCGATGCTTCAACTTTTGAAATCACGTCTACGTCTGGACGATGC AGAACCTAGTGAATCATTAACCGTCAACCGTGATCTAGAGGAGCCTGAAG ACACCGAAAACGAGATGACTGAGAAATTAAAACAGGAACTCATTTCCAGA TTAAACCCGACATCTTTGAACGATAATACAACACCTTCGCCACCTAGTAA CCCGATTTTAGAGGACGTTGACCCGATTGGGAATCCAGGTTTGCTGCAAC CGACTGCAACGACACTAGCAGCTCAGTTTGGACATCAAGCAGATCATAAA TTACATCTCGCAAACCCGGATGGTGTATTGAAACAAATATTTTCTCAAAT TGTTCCAATACAAGGTCAAGAAACAGGTGTTAACCAACAAATTCAAAATC AATTAACTCAATTGCTACAAGAAGGAAATCACAACTTGACGCCGGAGAAA ATTAAAGAAATCGTTCGTCTTGGAGGTGCAGGATCCAGCCAAAATATGAA CTTTGAACTTTTACAAAAACTTAGTGGAGGGCAAGCATTAACGGATGAAA TGCAACAAAAACTTAACTTACAAACAAACTCGGTCGTCGGGAGTGGACAG TCGTTGACCGACGAAATTCGGCAACATCTCGGTGTAGCAGCAGGCCAGCC CTTAACCGAAGAACATTTAAAAGTTTTCGAAACACTCGATGGTGGACGAG AATTACTCGTAGAAATTCGGGAAAAACTCGGTCTTGAAGTCAACGAACCA ATAAACGAACATCATTTATTAAAACTCGGAAGTGTTGAAGGTGGTCATAC ATTGGTCGAAAAGATTCGGCAAAAGTTCGGATTTGCAACTGGCTATGCAA CTGGCCGCATTTCAACAGAAGGAGTCGGGTCTTTGACGGGGCAGTCAATT TTCGGAGGTGCTGTTCCAAAACTTGGAACTGGGGCGATAGCCGACGAAAT GCAACAAAAACTTGGCATAGGAGTCGGCCAAACATTAATTAAAGAAATTC GTCAACATCTCGGTGTAGCAGCTGGGCAACCCTTAACCGAAGAACATTTA AAAGTTTTCGAAACATTCGATGGTGGACGAGAATTACTCGTAGAAATCCG GGAAAAACTCGGTCTTGAAGCCGATCAACCAATAAACGAGCATCATTTAT TAAAACTCGAAAGTGTTGAAGGTGGCCTTCTATTGGTCGAAAAGATTCGG CAAAAGTTCGGATTTGCTACTGGTTATGCGACCGGCCGAATTTCATCTCA TGAGGGGAGCGTGGCTGGGCAATCTATTCTCGGTGGCGCTCAAAAACCTG GAGCTGAAACGACCATTACCGATGAAATGCGGCAAAAACTCGGGTTAGGA GTCGGTCAAACTCTAACTGCCGAACAATTACAAAAACTCGGCATCAGTCA TACAGGCCTTTTGGCTGGTCAGCTTNTTAACGGATGAAATGCAACAAAAA CTTAACTTACAAACAAGCTCTGTCGTCGGGAGTGGACAGTCGTTGACCGA CGAAATTCGGCAACACCTCGGTGTAGCGGTAGGGCAGCCCTTAACCGAAG AACATTTAAAAGTTTTCGAAACACTCGATGGTGGACGAGAATTACTCGTA AAAATTCGGGAAAAACTCGGTCTTGAAGTCAACCAACCAATAAACGAACA GCATTTATTAAAACTCGAAAGTGTTGAAGGTGGTCATATATTGGTCGAAA AGATTCGGCAAAAGTTCGGATTTGCAACTGGCTATGCAACTGGCCGCATT TCAACAGAAAGAGTCGGGTCTTTGACGGGGGAGTCAATTTTCGGAGGTGC TGTTCCAAAACTTGGAACTGGGACGATAGCCGACGAAATGCAACAAAAAC TTGGCATAGGAGTCGGCCAAACATTAATTAAAGAAATTCGGCAACATCTC GGTGTAGCAGCTGGGCAACCCTTAACCGAAGAACATTTAAAAGTTTTCGA AACATTCGATGGTGGACGAGAATTACTCGTAGAAATCCGGGAAAAACTCG GCCTTGAAGCCGATCAACCAATAAACGAGCATCATTTATTAAAACTCGAA AGTGTTGAAGGTGGCCTTCTATTGGTCGAAAAGATTCGGCAAAAGTTCGG ATTTGCTACTGGTTATGCGACTGGCCGAATTTCATCTCATGAGGGGAGCG TGGCTGGGCAATCTATTCTCGGTGGCGCTCAAAAACCTGGAGCTGAAACG ACCATTACCGATGAAATGCGGCAAAAACTCGGGTTAGGAGTCGGTCAAAC TCTAACTGCCGAACAATTACAAAAACTCGGCATCAGTCATACAGGTCTTT TGGCTGGTCAGCTTGCTACAGGAGAACATTTGAATGCTGGAGGTGGTCAA TCAACCTTAGCAGGTCAGACTCTCGCATCAAAGCAAGCACTGGCCGACGA AATTAGACAAAAACCAGGTTTGGGCTCTACACAACCTTTAACAGAAGGCC ATTTACAAAATCTCGGAATGGGAGATGATAAAGTAACAGAAGAACTTAAA CTAAAGCTTGGTCTTATATCTGGACAATCTTTAACTGGAAGTCATTTACA AAAACTTGGTGTGGGCTCAGATCAATCATTGACTGAGAAAATTCGACTAA AACTCGGTCTTGAAGCAAGCCCAACAACAGACCCACAGCTCGGTCAAAAT CTAATGGACTACTCATTGCATAATACTGGGAGTAATGCTGTAAATTCTAA TGGTTTTCTTCAAAAAATATCATCCGACCCAACTCTTACAATGAACATTA AAAAGAAACTTCTTACAGAACTTTTAACAAATCCTTCTAGCCTATCCCCT GAACAAAAAAAACAAATGTTATTACAACTAACGAATGGACACCCAAATGC GCAGGGTCTATCGGCGAATCAAGAAAACTCTGTTCCGTGCCATCCACAGC CTTGTAACCAACCTCTTAATGCAAACCTACAAGACATTATATCACAAATT AAAACACAACCAACTCCCTGCCAACCCAATGCAGGTAGTCTAGAAACGTT AACTCCTACGAGGGCGCCTTGTAAACCAACAGGTAGCCCTTTAGCAGAAA TGTCTCAAAATAAATTGCCAGAAGAGCCTAGACTTCCAACAATGCCTGCA ATACCAAATCGGGGAGAAGAAGATTCCCCGATTATTTCGAATAATTTAAT AGATAAATGTAAACAACAACAAACTACTATTGGAGCAGTTGGGCGACCAA ATCCGGTTCACCCAGTTAGTCCTTTACTTGACCCCGATAGTCCGTGTCGG TTACCGGGTTCATTAACCGGTGGAATGGATTTGATTCAATTGATGGAATT GAAAGCAAGAGCTGCCGAGAGTGGTGAAGGTATGAAGTCATTTTTGAATG TATCCCTTTACTATATGTGTAGATATGTAAAAATCCATAAATCTACCATA TTAGTAGTTAAGGTATAAATACTATCCAGACAATCTAAAAAGAATGACAA ATAACTATTAAATGGCGACAAAAAGAACGACAAACCTTGACCCTAACTAT CAAAGAACGACATATTTCAAACCCTAACCCTAACTATCAAAGAAAGAAAC GACATATTTTCACGTTATATTTTTCAGCGATCATAGATGGCCATTGTTTT ATTGCAATTGATCTCGGGATCGCCATTGATACATCACGAGCTGCATACGA AAACTGGTCCCACATTCTTCCCTTCTTACAATCTCTCATCAAGCAATTCG AAGTGGTCGGGAAATCCCGAATCGGAATAATAACATACAGTAATGAAGCC CGAATTGAAATCCCGTTCGGAGGTATATTAGGCAGATCGGGTTTATTTAA AACAGAGACTACATATAAAGAGAGACTTTCACAGATTCAACCTAATCCGA ACGGGTTTCAACGGAGAACCGATTTGGCTTTGAATAAAGCTATTGAGCTT TTTTATAATGGTAGAAGACAGGTTCCAAAAGCATTGATTGTACTTGAACA CGGTGGCATTATCGGTAAGATGTTTTCATTTGTTTATTAGATGGTTTGAG ATTTTTGGCCTGTATGCAGTTGTACTGAAGCTCCTTCGGTACACTTTAGT ACCGCCCACCTAGCGCTCACTAAACACCCAATAGCGCCTTCAATGCTCCA CTGGGCAGTAACTTAGCGATTGCTGCTCAGCCCTCTGGATCTTTAACTTT AGTGTAGTTTGAACAACAAAGCGGGCGGACCAGCTCCAGGACCTAAGTAT GTACGTATCTTTTCTAATGTATTCAGAAATGTATAACCTTTGTACTCAAT AATCCAGATTCTCGGAACTACACAGTTTTCCATTAATGTTTGCAAATAAG ATCATAAGATTCTACTTCTCTGGGCTCCTAAGCCCGTCCCCTTCGTAGCC CGGACTCACTCGTATACTGAGTTTGAGTTCGTTTGTTAGGCCAGCATCTG GACCAGGCTCCAGTACACGAGTTTTAATACACAGTATATCTTTTATGCAT GACGCTTATGTTGGAATTATATTTTTTCTTTACTTTGGAGGATAGTTAAG ACAAAGATTTTGAATCTTGTTATAAGGACTATAGAAGCTATCTACAGATA TTCAAAAACCTCCTACATGTTGGGTCTTTAGATAGACCTTAGCTTTTCTG TGGGATGTGGCGTCTGGTGTGTTTATAAAGTCTGGTCAAACAGGGTCAAA GGAAATTGGCAGTCCGCACATTTAGATACTTTGCAACTGAAGGAGAAAAG ACGTTAGACCAAAAATAAATGTCTAATTAAAAATAGGAAATGGAAATAGG AAATAGGAAAGTTTCAAGCTAAAGATGCGACCGTAGTGCAGTGGTAGAGC ACCCGCCTACGGTTTGCAAAGTTGTGGGTTCAACCCCCAGCCGGGTCATA CCAAAGATTCTCAAAATGGTACTTGATGCCTCTCTGCTTGATGCTCAGCA ATTAAGGGAAGACTCTAGGGTAAGTGGAGAAATCCAGGGAGAAAGAGTGG TGCCCTCCCCTACCTTCGGGTAGATTAGCTATCGAAAGAGGAGTCTTTGG ATCGCCTCCGACTGCGGTCGCAGACTTACTTACTTAAAAACGTGTTAAAG AATCTAAGATTGACACGTGATTATCATAAATGTTTAGGTCACGACCATAC AGTCGATTGGCGAGCACTTCAACAAGAGCCTGCTGATCGTTTGAGAAGTA TCGGTGTCAACATTTTCACTGTCGGCTTCACAAAACATGCTGACCCCGAA GAACTACAGTCATTGGCTGGTTCAGAAAGTCACGTGATCTCTTTAGAAGG TAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005496TCONS_00005496Clytia hemisphaericatranscript
TCONS_00005495TCONS_00005495Clytia hemisphaericatranscript
TCONS_00005494TCONS_00005494Clytia hemisphaericatranscript
TCONS_00005493TCONS_00005493Clytia hemisphaericatranscript
TCONS_00005492TCONS_00005492Clytia hemisphaericatranscript
TCONS_00005491TCONS_00005491Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005494-proteinTCONS_00005494-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000053supercontigsc0000053:561560..568813 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.26 0.57 0.28 0.05 0.3 0.14 6.89 7.96 1.42 2.08 2.3 1.59 5.39 4.93 2.03 7.36 3.59 4.15 0.21 0.65 2.77 3.01 2.26 1.43 5.23 6.68 0.81 0.24 0.26 0.38