XLOC_003038 (gene) - C. hemisphaerica

Overview
NameXLOC_003038
Unique NameXLOC_003038
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000052:432672..439583-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003038 ID=XLOC_003038|Name=XLOC_003038|organism=Clytia hemisphaerica|type=gene|length=6912bp|location=Sequence derived from alignment at sc0000052:432672..439583- (Clytia hemisphaerica)
TTTTTCAGGTGAAAGAAGAACAACAAGATGAAGAAGACCTCGAAGAAGTT GAAAAAGAAGAAGCAGAAGAAGCAGAGATTGAAAAGATGGCTGGTGATGA TGGTTTGATATCCGCTGATGAAGTACCGGTTATCAGGTAAGGTTCATTGG AATTCTTCATGATATTCTACGGAAACGCCCCGTTTTATGCCAGTAATGGC AAATTTTAAACAATAAATGAAAGCCAGTTTTTGTATCCACGCTTATTAGG ATGAAGGAGTTAGTGAAAGGATTTGACATGCCTCACAGTTTTGGCCAACA AAATATAGGAAATTTTTTGGATGACTTTTTTTGAAAAAATCTGAAAATTT TCATAATTTGAGTTGGAAAGTAGTTTGCTACAAACAAAAAATTCACGAAA TTATTTTTCAATGTAAAAAAGACTTTAATTCTAAGGACAAAACATTAATT TTTGCACTAAGTGAAAAATGTGTCACAGAAATAATCATTTTGTAGCTTTT CAGTGCGAAAAGCAAGCAAGAAATAGGTGGTCTCCATGACAAATTGTAAC AAAAACTTTTACTACCTACCTCTTCCAAGAGTCTGGGTGGTGGTATGTAA AAATTCTTTTACTACTCATATATGTCTGAGATTTTACTACCGACCCCCCC CCCTGTTTTTAGGGTGGCGGAGTGGCTGAACCGATTTTGAACAACCTGTA GTTCCTAACCCGCAAAATCGAGGACGGTAAAAGTGCTGACTTACAGTCGT CTTCAGTCATTCAGGATCTAGACAAATCAGAAACTAACCGTCTCCATCGC AAAAAAAACAAACAGGATTCATAGACTCATAAAAGCTACACCGGTGGCTG CAGAAAGCTAATTCGATATTCGATGCTTAATCAATGTTGTATTTTTCTGT TTTCGAGCAACATGATGAAAATCCGTAATGAAACTTTGTTTCGTATATAC TAATCAGCCTAATTTCTTTTTTTAGACCGAGTGACGGGGAATTAGCGCGT GCACGTAAAGCACGTTTACGTGACAATATGACGTGGTTCGTCATCAAAGA TATTGGCACCTACTTTCTCTTCATTATGATTGTGTCGAAGCTGGCGTATG CTGAAAAAGATCCCCACCAATATTTATTCCGTCAAGATTTATTAAATGCT TTCCAAAATGCTAAATATTCTGGCGGACCGAAATTTGAAGATGTAAGAGC AGTTTTGTTTACTAGTACTAGCATACAGTTTTTTATAAGACAAACTTTAT TTATAAGAACATAAGGCTTTGATGACCAAATATTAAGAACAAATTAAGAA CATTTTAAGGTTTGCGAACTGTATGATACACCTACTATCTTAGGCAACTG CACAAAAATGTTGACGTTCTTATAAAGAAAACGTGTAACTCAAACCGCTG TACCTGAAATTTATCCTTTAAGTTGGAGTTATTTTTTACGAAACTTTCAT TGATTACCTCTCTCAGATCTCATCCTTTGTGTGATTCTTTAAGTTATAGA GCTTACAGTGTTTTCAGATCTGGTTAATTCTCATACCGTTACTTAAATCG GAACAGTTTGAAAACTAGTAAAAAAAAAACAAATAAAAGCAAAATATTCC AAGGTTGAATAACTTGCCAAAACAAATTATGTTTGACTTTTGTGTACCAC TTTTTAACTTTACCGATGAGTGTAACTTCGTGAGCGCTATCAAAATCTTC AAAAGCGGGCTAATTGACTGGGTTCGAGTTCCAAACTTTCAAAACCGTAT AACAATGTTATTTTCTATGTTCTTTTCTATTTAGGTTTCCAACATTGGTT ATTTTTACGCGTGGATGAGAGATACTCTCATCCCAACCGTCTTCCAAGGG CCCTGGTATAACGATGAAGACATGGAGTACACTGGATACATGGATAATAA GCAGAACTTCCTTGTCAGCATTCCACGCATCAGACAAGTGCGTGTCCATA AAGGTAAGTGTAGAAATTGTTTTATATAGAATTTTATGCGAAGCTCAACA CTTAGTGTTTTGAGCACTCTGGTGACAACAGCAGTCTATGCTCGCTAACC CGAGCCGCACTGATGAGTCCTGGGAAGGACAAAACACGTGTCTGCGGATA TATGTATAGAACTTGATATACTTGTTATATTATATTTAGTCTAAGATTTA GTTTAATACAAATCAATTACTAAGAAATAAGCCGAGAGTCGAAAAAATTC GAAAACAGGTTTTTTTGCCGAAAAGAGTATACAGCTGGTAGAGTGTGCCA GCCTTCGAAACTCTCCCGTCAAAATTTGGTGTTGATTGCATTAATAGACT TGAAGTTATCGCTGTTTTCAATAATGACGTCATTTGAATCTTACTTATGA CGTGTTTTTTCGATGTATTTCATAACGTCAAAATCAGTTTTTGGTCGATA TCTTGAGATTGGTTCAACTTAAATTTTCGGCCCAGCACTTTCCGAAATGC TCTCATTAATTCGCTTCTTTTGAGCTATATACAAGAGTTAAGGAACAATG GGAAGCGGTGGAAAAATCAGGAAATAGGCTTTGGACTTTCCTTAACTCAC CTGAGTCCAGCTCTACCGAGCGGCATTGAGTCCTCGGGTTCCACATGGAC CCGTAGCTCAATGGTAGAGCAAATACCCGCGAATGGCATGGTTGTGAGTT CGAGTGGTTTTCCAACGGTTCTGGTGGCTGGTCAAAAGACAACACGAGAG CGACTGTATTCACTTCAATGTACCAATCTGTTTTTTACTTATTTTTGTAT AGATTCTTGTATTGTACCCGATGAATTTTCCGGCTACATCAACCATTGTG AAATGGCTTACACGACATCAGCGGAAGAGGAGAGAGATTACGACATTGAA TGGAAAACTCTCAATATGTCTAACTGGCAATCAACAAACAGTCGTAAAAG GCGTAGCATTTTCGCGCGCACCTCAAGACTTATATCCCACGGCGAGGAGG CGCCGCTGACACCGAGATATCGTAAACGTCGAAATACAGACACATCGAGT AATGTAGGCAGCTACCAACAAATTGCGACGGGACGGAAAAGTTCTTTACG GCGTCGCAAACAAAAGAAAACTACGTTAACCGGTTCGCCGATTTATTACG TATCCCCGGACGCGTTGCTTCCAGACGGGAGTGTTATTTCGTGTTTGGAC CGATGGGAACATTTTACGCCGTCAGAATTACGTGGTTTCCCGGTTCTCGG TAAATTGGTGACGTACGGAGGTGGAGGGTATGTAGCGAACATAGGCTACA ACGAAGAAACAGGCTGGACAGTCACAGCTGATCTTCACGCACATAATTGG TTGGATAAACAAACTAGAGCCGCCTTTGTCGAATTTACAGTCTACAATGC AAATGTCAATCTCTTCGCCACAGCTTTCCTCTACATTGAGACTCTGCCAA CGGGTGGGGCGTTCCCATGGGCGGACTTCCAAGTGTTCAACGGATACAGA TATTCAGCTGCAAACGGTCTTCAAACGTTATGGGCGGAACTGGTCTTCAT TTGCTTCATCATTTATTTCTCCGTTCGTGAAATTCGAAAATTGATCAAAC AGAAGGGAGAATATTTTAAAAGTTTCTTCAATCTTATTGAATTGCTTTTG ATGCCGCTCTACATTATGATGTTTGTTCTCATCATTGCACGCTGGTTGAC CACTTCAGCAAACATCAAAACTTTCACAGAGAATCCCAAAGACTTTGTTA GTTTCCAGTATACTACAGCTGCTGATTCAGCACTCCAAGGTAAGAACTTC ACAGCATACCACCCATATTTCAATAATATACATAGTTGGAAAGATAATTC AACGTTGTATATTTAATAAAAACACTAAAAGCCCGATAATTTTGACAAAG AAATTTTGTGAATTTGACCGAGTTACTGCCAATATTAATTTTTTCCCCCA TCCGCTAATAACATTCCCACCGAATTGTATCCATCCCAGATTAAAACTTT TTTTGCCTATTTGGTTACGATTTTTGCCTAAAAATGTCTCATGGGATGTG ATCACCATGGAAATTGTTTGAATACTAGGCAAGTGATGTTCGTGACGTAA TTTATGAAAAAGTCTATTGGGGGATTGAAAAGAATAGTTCTATTTATACT GAGACGATTAATTTGTCTGAGACGAGCAATTTAGAAAATGAGCATTAAGG AGGAGTGTACTTTCCATTCATGTTTCAATAAATAGGATCTCCTCCGCAGA TTACATTGTACAAACTACTCGTCTCAGACGATTTTTCCAGCTCAGTATAA ATGGAAGTATAATCGTATACCTTATCGGGGAAAACTTCGTCGGGGAAAAG TGACGAAATTTTGGACAAGTGACGAATATTTTCCCCGATGAAAATTTTTC CCGGCCTTAATGCGTTTACCAACTACCAGCAAGTGACGAATTTTTCCCCG ATAAGGTATATTATATATAATATAGTAGTATAGTCTTAGTATAATTTTCA TGATGAATGATTTATTTTTTGATAACAGGTGTTATTGGTATCGTTTGTTT CTTGCTCAACATCAAATTCCTTCGAATGTTCCAATTCGCCAAAACATTCT GGACTGTTGGTGTCATCATGAAGGGCTTTGCATATCCACTTGGTATTTTC ATGATCCCCTTCACCATGTATTTCTTATTATTCGCTTTCGTTGCTAACCT TGGCTTTGGTGCACACAGCGAGCATTACCAGTCTTTCGTACGTACGATCT GCACTCAATTCTTACATTTGTTGGGTGCAACTGATTTCGAACATATCTCT GACGTGTCACCTATCTTTGGACCAATGTATTATACAGCTTACACTGTTTA CATGTTGTTCATTGTTTTCAATGTGTTCTTGGCTATTATCTGTGAAGCTA TTGATGGTGATTACGAAGAAGAGTTTGTGAAACAGGCTGGTGATATACAG GTAAGTGCTTTAAAGAGACAAACATATTATTTGATCCCGTATTTGATAAG TGTGTTGACAACCTGGCAGTGTTAGTGATGTTAGTATTTTTAACACAAAA CTTTGTACCATTTTAAACATTTAAGCATTTAAATCAAAACTAAGGCCAAA CTTTTGGTGAAATTTCAAGAGATTCAATTCTCGATTTCTGAAAAAAAACA AGGAACGTGTTGAAACAATCTAAAAACCTAGATAACTGGGCTATCATGTA AAATATCTATCCTTCTATTGTTGTTTGTGGCCAGGTAGCTCAGTCGGTAG AGCATTTGCCTTATACAATCTAAGGATTGCAGGTTTGATGCCCTGCCACC GCTAATTCAGCGTTTGAGTAGGTAATTCTTAGATTGGGTTCAGCATTCGA CCTACCTGGTCATCCAGGTCTAGCGCAGATAGAAAAGGGGATAGACTCCC TAACTTCCGTCCCCTGACTCCGCGGACAGCTACTAGATAAATATAGTTNG ATTTTTGAAAAAAGCAAGGAACGTGTTGAAACAATCTAAAATCCTAGATA ACTGGGCAATCATGTAAAATATCTATCCTTCTATTGTTGTTTGTGGCCAG GTAGCTCAGTCGGTAGAGCATTGCCTGGCCACCGCTAACTCAGCGTTTAA GTGGGTGATTCTTAGGTTGGGTAATCTGATCTGGATTGTATTCAGCATTC GACCTCCCTGGTCATTCAGGTCTAGCGCAGATAGAAAAGGGGATAGACTC CCTAACTTCCGACCCCCGACTCCGCGAACAGCCACCAGATAAGTATACTC ACTTATTATTGTTCTTAATTACAGGTGATTGAGTACATGACACGGAAGTT CAAAGACATCATTGGTATCGAAGACGAGGATGCGCGTCAAATCGAGGCTG ACGGTGAAGACCTACCTGAAGAAAAATTGAATGAAACCAACGAGAAGATG TTGGAATTTGAAGAGACGATTGCCAAACTTGAATTATATGTGAATGATCT TCATATGGTTGATGCAATGAAGGACGATGCTTCTGAGGATGTGGAATATG AACCTGACCACAAACCAGCCAATCAACATTCACCAAGAGATGAAGAATCC AATGATGGTTCTCTTCAGCTAACATCACAATCAGCAGTATCAGGATCTAA TATGAACCTTTCAACTATTCAATTATGAGAGTTTTTATGATGTTTTAAAT TTTGATTATTCAATTATTGGTTACGGAAAATCTCACAACATTGGATACTT ATATAGCTGAAAATATTCCAAAGTGAATCTTTCAGACGTTAGATTAAGAG CCTTTTACCAGGAATAAATTTACCATACAGTAAACTGGATTGAATATTTC ACAACATTGCTTGCTTACCGAATATTTATAAAGAAAGCGAGTAGCACCTC CCTACAATCTGTAAGTTAATATATTGGCAGTAGCGTAAACAATTAGGTTT TTCCTTAGTTGTCAGCCCAAACCTTTACAGCATTAGGGAGTGATCAGAGA TCATCTACAGGGGGTGGAGGATTAAGGAGTGTCAAAATTTTTCCCTCCCT TAGGGCGGGGGGCGGGGTGTCTCAAAATTTTTTTTTTATCTTTAGGGGGT TCTATAATAGGTGGAGGTGCCAAAAATATATCGACTGGTTAGGCTTGATA TCTTTTTGAGGATATCAACCCCTGTGCGAGTTCTTTGGGAATTTTTGAAA ATATCCTCCACCCCACCCAGTAGATACTTTCTGACCACTCCCTTAAACAC AGGAGTAGAGGGTCATTATAAAAGGGTTCACTTCCATTATTTTACTGACT GATTGTAGTAGCGTAGCGTTCGTGGTAAAATCATAGGACAAAGCTAAATC CTACTTTTTTTCTTAAAAATCCAACTCGAAAAACAGCTTGAAACTGACCG ATTTCTTTTATTTATTCACTGAGGGTTTGATATTTATTGTAAAAAAATAT TTAATGACGAAAATATGAATTTTATTTAATAATTTTTAACCCATTCACAT TTGTAATTTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005345TCONS_00005345Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005345-proteinTCONS_00005345-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000052supercontigsc0000052:432672..439583 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.88 0.8 1.13 1 1.45 0.95 0.85 1.14 0.64 0.85 1.15 1.03 8.05 7.92 1.27 1.72 1.28 1.51 16.45 18.55 4.36 4.57 1.43 2.43 5.16 6.46 0.94 0.87 0.74 0.58