XLOC_003024 (gene) - C. hemisphaerica

Overview
NameXLOC_003024
Unique NameXLOC_003024
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000052:742993..746383+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003024 ID=XLOC_003024|Name=XLOC_003024|organism=Clytia hemisphaerica|type=gene|length=3391bp|location=Sequence derived from alignment at sc0000052:742993..746383+ (Clytia hemisphaerica)
TGAGCATCAAGAGAAAGCAGTAAAAAAAGGTTTCGGCATCTGTTGTAGTT
TTGAAGCCTAGGGAGCACTGATTCAAATTCGAGGTCTTGCGTTTCAAGGT
TTTTGGCGTTTCACGCGTTTTCGTTCAGTCTAGACCCACTGGATATGTTA
GAAGATGGAAGAAGGGCTGACACATGCAAGTTTGAGAAATAGTAAGGAAT
TTTCTTCTTATCTCTCTCTTTTTCTGTGCTTGCAGAGAAAATCTCTCAtt
tcgaacattttcaaaataccATCATAACAAGCgaacaaaaaagtgaattt
ctctgtctttgaaaattagaaCTACTGTAGATGATATCAAAAGGCAACGT
TTTGTATATAAGATTTTAGTTTAAATGGAAACTTCAGTCCAAGGTAAGAA
GGTTTCGTTATaaaatcaaagaagaaaaatacTGAAGTTGCTTTATTGAC
GTCGAGCAAAATCTAGCTTGAGAGTCTAAATACAAGGCTTAAGACATCAT
TTAGTCTGAAGAATATTAAACTCAAAGAACTGTTCAGCAACTATGTATTT
TGTCGACTTTTGACAGTTTGACAGTTTCTCATCCCGGTAGATGTATAGCA
CGTTTCAAGTCATGAAGTGGAAAATAGGTAAAACGACatgttttgtaaaa
aattatCTGTTTACTTTGTCTAATTCTTATTTTAGACATTGGACGAGCAG
GTGACGGTGAATCTACTTTTGACGATGAAGAATTCTGGGAAAGTGTCCCC
GTTTTCCCCGATCGTGAGAAAGAAGCCCGATCTGTAATCCGAGAAAAATT
GAACGAACGGAAACAAGCTTTTAAGAGTGAGTATGAGGAGAGGAATAAAT
TGGAACGTGCGCAACGAGCGGAGGAGGAAATCGATGTCTCATTGCACGCG
CGCAAACAAGCGTTCTTCGACGACGCCAGTGATCGGGAAACGGTGATCAA
AACTTCTACCGCACTATCTGTACATTTAGATGAAACATCTTTGAACGATC
GAAAACAAGCGTTTCTGGATGACGCAGCGGAGAGAAATAATAGACGAGGC
TCTAGTCTATCGGATGATATCACCGAAGGCTCGCTTCACGAACGGAAAAA
AGCGTTTTTCGATGACGCAAAAAATCGAGAGAAAGTCGATAAAACTTCGA
CAGCTTTGAGTGAACATTTAGAGGAGACAACTTTGCATGATCGGAAACAG
GCGTTTCTACAGGACGCGGACGAACGGGGAAGATTTCAACGTACAGAAGC
GTCCGAAATTCAAGAATCCTTATTATCGGACAGGAAGAAAGCATTTTTTC
AAGATGCAAGCGAAAGAGAGAAATTTAGCAAAACTGAGGCATCTGAGATT
CAAGGTTCGATACATTCGGAACGTACGAAGGCGTTTTTCGATGAGGCCTC
ACAGAGAGAGAAATTCAGGCGGACTGATACACAAGAGGGCGTTGATATGG
GCGTGATTGCCAATCGACGCGCAAGTTTTCGTAAAAAGGATGCTGAAATT
CAAGCAGAGAAAGCGGTAGATGTGCGGGAAAATGTGAGCAAGACACAACA
TCGAGCTCGAATGATTAAAGATGAGAATCAATTGTTTAAAGTTTTGAATC
GAAGGCGCGCCAAACTGGAAGTTGAGGAGGAAATAAAAGAACAATTCCCA
GAGGAAGGGAGTGTGAATTCACAAGAAGATTCTGTTGATGGGAACAACAA
TTCTGTTGAGGAATCAACGAGTGAGAAGATTCTGGATGAAAGTAAAAGCG
AGTACGGATGGAAAGTGTGAAGAGATCGTTTGAGAAAGATGCTGATTCAC
CTTGTATGAATCTTGAAATTTCGTTGTCGAGGGGAAGGAGGAGTCGTATT
CGAAGGGTAGAGCATAATTCGGCAAAACAGATGCACGTAAAGAAAATCGA
GAAGTCTTCCCATAATGAAACATTGATGGAGAGAGATTGATGATACGAAA
GCGTAATGTATTTACTCGGTGTCTAGCGGAGTAAATGTTCTTGGAAAGTG
TAAAATTGTGATATTTTGTATAAACATTTTCGAACAAGTTTTGTATCCTA
GGTGAATGAATATtgtcaaaaatgaagaaacaaataaaaataattcaccG
ATAATTCACTACCTCTATCTTATTCAATACCAAATTCGAAAAtaacatac
cttatcggggaaaacttcgtccgggaaaagtgacgaaattttggacatgt
gacgaatattttccccggccttaatgcatttaccaactaccagccagtga
cgaatttttccccgtcgaaaatttttcccgacgaagttttccccgttAAG
GTAATAAAAGTCTATACTAGAATACTAATTTTATAAAATATGCAGTAAAA
GTCTTTAAAATACATTGAAATAGTTATAAattaaagaaagtttgagtttt
AAAAACTCACATAATCTACATAATCTATAAGCACTGGGCTATCTACTCCA
AAAATGTGTGGGTACAAATTCATTTAAATGTATTCCAGTGGGCTGGAGAC
TTAACACAACAAATTACACATAATCTTGAAACTTTTgtgaattttgcaaa
atttttagatGGAAAAGCCTCTTTATACTTCGCCGAGAGGGAAGAACTTT
AATCATTGGtatttaataaaattcaaaaacataaaAGCTTCCATTTTGTT
CTCCGAAATGATTCATAAATGATTTAGGAATAAagcaaaatttgttttca
agtATTTCTGATTTATACCTCGTTCGCATTGTCAACTTTAACATACTTTg
tgtttttattcatttttacaaaatttgtcAATGTATCAAAATCTtactat
tttaaagattttcttttcacTGATCATTTTGGATATTCCATTTCGATTTT
CGAACACTTTTACATCCTGGAAGTTAATCATCCTTCTTTCCTTGGTCGGG
TTTTTCTTTCGCTGCGAACATTCTTTGCGGAACTTCCGAGAAGATGAGAG
TTCCGGTAAACACAAGTAGCGTACCCATCCAGTGGTAAAAAGTGAACGGA
TTGCGGAAGTAAACAATAGAAACAATGAGACTCATGAACTTCCGGAGTGT
CAAGATAACGGTAATCGCCAGAGCGGACAGTTCCGATGTCAAAGTAGTTA
CGGAAGTCACAcataaaaatctattttttttaaatgggtTTGTAAAGGAA
AATTGGAATAACATTTTGTTTTTGCACATACCTTAAGTGGGTACAAAATG
ACatatgatgataaaacaatacaatacaactacagttgacactctctaat
tcgacgttctactattcgatcggctcccttattcgataaaatttaaagtC
CTCGTCAAccaaaaactctcataaacgacgttcccttcttcgataagctc
ccttatttgatgaaaatccaattccacttgaagatcgaatt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005312TCONS_00005312Clytia hemisphaericatranscript
TCONS_00005313TCONS_00005313Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005312-proteinTCONS_00005312-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000052supercontigsc0000052:742993..746383 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.22	0.31	0.04	0.09	0.2	0.18	0.32	0.57	0.21	0.18	0.17	0.22	2.76	2.57	0.17	0.3	2.58	2.41	5.1	2.7	5.29	4.87	3.57	5.04	8.11	9.87	3.33	2.77	0.16	0.33