XLOC_002935 (gene) - C. hemisphaerica

Overview
NameXLOC_002935
Unique NameXLOC_002935
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000051:638248..643634+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002935 ID=XLOC_002935|Name=XLOC_002935|organism=Clytia hemisphaerica|type=gene|length=5387bp|location=Sequence derived from alignment at sc0000051:638248..643634+ (Clytia hemisphaerica)
ttttgaaaatgtgGCGCAAACAGAATAACGGTAAGCATTCATTTTAGACC
CAATAATCTTGAATATCCAAATACGAGGAAagggaaaaaaaacttttgtc
gcTAGGATCATAACGCACAGCACGTTGTTATCTTTGAAAGTTCAAAagca
aaatattgattttctttggattaGCACTAACCAACCACAGAAAACCAAAA
CTATTTCTTAATCTAAAATTATGGTAAATTTGGATACTGTCAGACGAGGT
TAAAAAGAGTTTGAGAGAGATAGGAAGGAAGCGAAGGTCACCAAAAAGAG
GAGAGTAGAATAAAATCTGAAGAGGAGTTATCCAGGATGTGGCGACATGT
CAAACAAACTGCTTCACAAAAGAAATTGAGCTGCACTAGTTATGAAAAAT
CCATGATGAACCACCTCTTTGTAAGGTAAGCATTGGTGAACCCCCCCACC
AGTGGTAAGTCTGATCACGATGCCAGcaatttttttgtcttcaatcacga
tcacgtaaatcagcaagaaattcaaaaaattaggcatcacggctcaaaaa
tcttttgaatcACGATCACGctttgacctctgatcacgcagtcacaaaga
aaaaatttccgaatcacgtaatcacgcaagaaaaaggtcgctatcacgcc
atcacgaaaaccgcttcgTGGGGAACATTGGTAAACCCAATAAATGCTTG
GTTTAACTTAAATGTTCAGAGTATTACCCTTATGAAGCTGTGAAAACCTT
TTAGGCTGCTGACATCCACTAACGAATTCGTGCTCCTATAATACCTGCAG
TTTTGTAAAGGTCTGCGATTCTGACTTAGGGTCACTAGAGGTGTAGTCAA
GGGAAAACCCTTAGTTGACccttaagattttttaaatgcaaattTGATCA
GTTGAAGGAGCTACAGTATCCGTCAATGGTGATGGATGACGTTTTAGATT
TTAATAACATAGGGGAGGGGGTTTCAGGGGTTTAAATTCTACCGTTTACA
GGTCAACACCGATTCTCATATAAAAGTTTGAGTGTCATTCCCAGTGAGCG
AGCTCAAGTTTTTTCGGCACCATATGCTGCCGCTCAAAAATGGAGTGTcc
gcatttttttttctaaaagagtTGAATCATTGATATGGGGTGTAAATGGT
GAAATTGTATTGAGTAGAAGGTGGTACTGTTTAACATCACAACAGAAGAG
CATTTATGTGgtatttttcatgaatttataTATGTACGACTTTTTCATAA
TAAATGATGGATGCTTTGTATCATAATGATAAATCTCTTTTCGCTCACCC
TGTGCCAGCAGTTGAGATATATTTAAAATGTTGGATGATGAGCTGAGAAA
TCAGTTTTAAATGGTCGTTGAGTTGTTGAGTTATGTAAACTCTTGTCAAG
TGGAGGTCATATTTCAACAGCTTTACAAACATTTGagcaaattctttaaa
aaaaagttgatgttGATTTTGTAGTAAGGTGAAAGGGAAAGTTGGcctaa
agaaatttttgttgttgcGTGAATTTGTTTGAAgtgaatttgttgaaaaa
tgaagattttgtcGAAGCATAAGAAGAAGAATGATGTGAAAACGAAGGAT
GGATTTGTCCAAGACTCTATTGGGATGTAAGTTGTCAATCAATGAAacga
ttatgacgtcactcatccTTTTGGCTTCCGTAATTTTTAATGACGTTTCT
TGTCATTAAGAAATTTAACGAAGAAAAATTCGTCCTCTaaacaatttatt
tttgaaaattgtttttttgaagataGCATTGTCATTCTTGCTTTAGCAGC
GATGGTTTATGTCTTTCAAGAAAATTTAGTTCGAGAGGGAAAATAACCGT
AATTTTTTCTTGGTTCAAAATTTCgtcagaaaataaaagaaagaccaTTG
AATATTAGTttatatttaaaggttttattgttattatttacATTTTGTGA
CGTTGAGTTGATGATAATTAGGACCAGACATTTGTTACTAGGTCAAGAGC
TTAGTTTTAAGGGCTTAGAGCACGAAATTAGATTATAATTAATGTTTTTG
TCTTGAGAAAGACGTGAATAAGCCCGTATAAGGAATTTTTGTTTATCGAA
GGATCTAAGATAAACAGACGAGCATAGCGTTCTATTTGGGTTTTATTGAT
CTGATTTGATGATAAGACGTGATAAGTTCGTTCGCTATGTAGAAGTATCG
CTAAGGAAGAGGTTTCGAAGTGTTGTCAAGAAGCAAAAACAAGGAAAACT
TTCTATGATCTGTGATTCTGAAACGTTCTAAAATCAAGTGGTTTATGTCG
AGATTTCAAAATGGATATTAGCAGGCCGACGTCAAAATATTTCGATTTCG
ATCACTTTATAGGGTATGTAAGAAAAAGCATGGTTGTTGACTATGTAAAA
GAGAAAGTATTTTTAATTAACTTTCGATCAAACAATCTACCGGAATCTGC
TTATATTTCAATGAAATGTGATTTGTCTTGTGAGTTCAAGTTGATATCTT
GTAGTAGAGATCAGATAGTTGTGGCTGTTTAGTTTGGAGTGAGAGTGAGG
CAATCGATACTACTGttttggagaattttttcaGGGAACTATGCAAATAA
AGGAAGATAATGAGGCTGAAAGTCCAAATCAAACCTTTCAGATTATATTC
AGTTAACACGTTAATGTGAAAAACAGTACTTTTCGAATATCAAAATACAT
TGTAAACTTTAAACCAGTTCTTAAAAGTTAATTTGAACACACTTGTTGAA
GGAgggtttttcagaaaattatccAACCTGaatttttgttgaaagtttGT
GATAGATAGCCATGAGGAAGTAAGTGATTACTGTGTGTTCGACTTTGGAT
CGTAAGAAAGTGTTTGATGGGAAAATAGAAAGATTATTGACTTTCACAGC
AAAGAGATACTTGAAAAAATAGCGGAAAATGCCTTTCAGTCAAATTTGTA
CACcgacttttttctattgtttatatgTGACCTTAAAACGTCAAAGTAAA
CCTCAAACTGAGAAGGTTGGGATCTAGCTAAAGGGAAATGCATATAATCT
GGACAAAAGCAAAAGGATCAGTATAAATTCAGGTCTTATTGAAATTATGT
TGTGTCTTCTGAAATGAGCTTGGTACTGAACAAAATGTATTTATTTCTTG
ATAGGATGACTGGCAAAACCCTTGGTATCACCGAATCTNGTTTGGTACTG
AACAAAATGTATTTGTTTCTTGATAGGATGACTGGCAAAACACTTGGTAT
CACCGAATCCGCAAGTCTCTTCAACATGAAGGAGTTTTATAAGTGGGAAT
TCAACGATGACGAAGAATCAGACGACCGCCACATCATTCATAAATGGTCG
CGCGACCGCATCAAGAAAATGCACGGATTACGAAAATCGTACATGAGCTT
TTTGGTGTATTCATTCCATTTAACAACATTGAAAAGTTTCATtgagaatt
tcaatttcatggtGATCCTTCAGATGATCTTAGCTGCTGGTGCCGTTTGG
TTGTTCGATTATTTTGACATTTATTTCAATTTCCATATCGGACTGTTTGT
TTCACCCATCGTATTTCCTCTGGCTTTCTCAATAAACACTGACTTTCAAC
GGAGAGAAAAGGTATTGGACGATTTAGCTAACTTTAAATCTTCATCCATG
GTTTTCTTCTTTTGTATGAGGGAATGGAGAAGTGCTTCAGGTTTGGAGGA
AGCTTGGTTAAAAGACATCAAACAAAAGGTCCATAGTATGATGTTCAACT
TGAGAGAATATTTATTGACAGATAAAATGAAAAGACGTGACATTATAGCA
CGCATAATGTATGAGGACTTCAGTGATATTTCACAATTGATCGAGAAAGT
TCGCGCCAGCAAATTACCCGCCAATCCTGCCATTGTATCAAGGTCCGTAC
ATTTATTGAACATGTTATGTCTGTCATTCGAACGTTTACGAGTCATTCGA
GAATATCGATCTCCAAGATCCATTCGATCTTTCAACAAAGTGTTAATTTT
ACTTTTACCCATAATCCTTTGCCCATATTTCGTTTATTTGGGACGATTGG
GTAAGAAGGAGATTAGCATCGGAAACTGGGGGCCTTACTACATCGCAGTG
CTCGTTGCAACAGTATTCGGTGCACTACAAGGAGTCCAAGACAAATTGGA
CGACCCTTTTGATGGAATGTCAGAGGACGATATAAACTTGGACACAATTG
ATGAATGGACTTTCAACTCCTTGAAGTCAGCTGCCGAGAGAAGCATTTAT
ACTATTGGTAGATTTCAAGTGAAGAAAGAACAGACCGAGAAACCACGATC
GAAGAGTATTGTTCAAATGTTACACGAGTTAGAAGCTGAAGAATGCCCGG
AGTCTGACTATGAAGCTCCAATTCTGAAAGCGTCGAAAAGCCCGTTTAAT
AATCGGAAAACAGGGAAAAGCcttttcagaaaaagttttaatcaaaaatc
aaagagaCGCGCGGTCGTTCGAAGTCAGACGTTTACCGGCTCTGATAAAT
GGAAGGAAGGACGTAAAAGGTTCAGTTCGACAACTTCACAAGCGTGGGCC
CCTGAAAATCACCCGTATGCAGAAGTTCTTGAGAAGATGTCAGGTGACAG
TCGTATTGAACGTAAACACACAGTACGTCACCACCCGATCGCAGCACGGC
AACAAAGTCATGAGCCGCATCCCACACCGAAAGATACGGACCTTCAACGG
AAAAGCGTCTCCGAAGCTTCTTTAAACACGATTCTCAAAAACGAAAATGA
CCAAGACTCAGATACAGGTGAACATCGAAAGAGTTTGGGTGTAAAGTTTC
AAAACGAGACTGAGTTATTCACTTATGACGAACGAAATAGTTTGAACAGT
GGTTCCAACAGTCGGCTACCTCTtctaaatgaagaaaaagagaaagaaga
acAGGACAATCGCTTCAAAACGACGAAACTCGAAATGTCACCTTTGAAAA
ACGGGGCACGATTTCATAAGAGTGTAGTACCCTCTATGAGCGTGAATAGC
GCTGATGATGAACTAACGCAAGTCATTGTGGATTCCAGCCCTCCAACTAA
AGAAGACAATGTCTTCGCttagatatttttttgaatttcttagtTGACCT
AAGTCCTTTATTTGGAATGTTTTTGAGcggtaattttgaattttgagaaG
GTATGCTCCTTGTGAGAATTTTCACTTGTTTCTTGTTGTACTTCACTTGC
AAGCAAAGGATTTTGGATTTCTTAACCCGACAAACCGTAGTAACCTACTT
ATTCAAAACCTTTCAAGTCTGAACGAGTctgaaaaaatttcttcctcACA
GTTCACATCTTTTTGACGGTGGTATCAAAACCACAAAAAATTAGTTTATT
AATAAATTTCTTTTCCAAATACCACCTTGTTTGTATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005147TCONS_00005147Clytia hemisphaericatranscript
TCONS_00005148TCONS_00005148Clytia hemisphaericatranscript
TCONS_00005149TCONS_00005149Clytia hemisphaericatranscript
TCONS_00005150TCONS_00005150Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005150-proteinTCONS_00005150-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000051supercontigsc0000051:638248..643634 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04	0.1	0	0	0.15	0.09	0.55	0.63	1.75	5.09	1.8	6.21	24.24	16.64	20.19	26.67	10.11	16.46	18.35	19.16	4.93	5.11	3.15	3.95	6.52	5.97	3.95	2.34	4.01	2.61