XLOC_002747 (gene) - C. hemisphaerica

Overview
NameXLOC_002747
Unique NameXLOC_002747
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000049:184191..187774+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002747 ID=XLOC_002747|Name=XLOC_002747|organism=Clytia hemisphaerica|type=gene|length=3584bp|location=Sequence derived from alignment at sc0000049:184191..187774+ (Clytia hemisphaerica)
AATACCTTAGTTGATAGAAAACATTTGTAAGACCATGGGAATagtatttt
aaaattcaaatatatTTCTCGATTAGTATAACACATAACCTATACATAAA
TAATCCACAGTAATGATTGCGTATAGCCCATTTTTATTTGCCGGCTCTAG
GTCCAGAGGGCGGGATTTGATTCTCGTCCAATAAAAGTTCTTTGAGACGT
TCATCCAATTGTTTTGCAGAAACATCAAAACTCTGGTGATAGTCTTTACT
TTCGAAATCGATTAAGTCATCAAGATCAGCAACGATACGATTAATGATTC
GCTTTTGTGTTATTCTGccttcttcatctttatttataaggaGAGTTCTT
GACTCGATAATCCCTGCCACGAAGAGGGATAGTATAACCAATGGTAAAAC
ATTTGCCATTTTGTTCTCGATGTTCTGAATGATAGGAGCGACGGATTCTT
TAACTTGTATTGCTTGTTGTTGTGGACGTCAATTAAATCAATCTTAAAAG
CGTTGAAATTCTCAATCAAGGTACCAGGTAGTCaagaagtttcaaaaaaa
agaagctCGACTTAATAAATGTagattcttttttctcttttcaaatgGNA
TCAAGGTACCAGGTAGTCAAGAAGCTTCAAAAAAAAGAAGCTCGACTTAA
TAAATGTAGATTctattttctcttttcaaatGATGGTATCTACAGAAAGA
CTTTCTTAGAAACTCAGCTCTTCTGAATTGAACCTTTCTAaatgaatata
tattttattgaCCAAAGTAGTATAGGAAGGGTGACGAAGAAAAGTGGTTA
AAACGCGTCGATAACTCATCACTATGTTTACATATTCCGGAAGGATAAAA
CGGATTACTTTCACTGATATAAGGGGTCTGTTTAAATCATTTAAGGTTTC
TAACTATAAACTTTATCCCATAAACTCAAAAattctttattataagcata
tatGAATATAATGTAAGACTTTAACCGGGGGAAGAAATACTAGGGCGTGG
TCAGTCGATCTGAGGAAAACTTTAAGACTCAAAATTAAAAGTAAACTTAA
GATCATATCAGAACAACCAGTTGACTTTGACTTGATTTAGACAAGAAGAA
AATATTGTTGAATATATTGTTGTAAAGAATACGATATCCATTTCAGCGAA
ATTCTTGTTTTGATTGTAAACTAATAAAATCTTCCCTACACTATAAAGCT
AATTTTAACACAGGCCCAATATGGCTTTTCCTTTAAGCCTCAAACTTGAT
CTGACCAAATGTTTAGAAGGATGATAGACTTAGCacggaaaaaagggaaa
ttgagAAACTGAAAAGCTAAAAAGGCTTTTAAACCACGTATTACAAAATT
TCTTAGTACAAAATTATTGAATAATAAGCTACCGATTAACGCTTATCGGT
AAAACGAAAATCATTTTACGCCCTGTCTCACTATCTCTGACTCAATATAA
agtaactagccggtacccggcgtcgcacgccggtttagctgtttgctgaa
cgcatttaaagtcctttaagattttgggaagatggcttaaacacgatgaa
atcaaaattaaagggaagaattctcttcaaagttggACTCTATctctccc
gggtgacgtatcttttaaccatattttgaaaaagatttttgtggcattcc
caaattacaccataccggcgaccagcgacgtccgagaccgtccccccccg
gaaggcagcagacaaaaaagcgtgatagatagcgcaattttatgttcctt
tttataaaataacttcgtcataacttcaaaaatttttcaaattcaacaat
gacttagatttacaaataattatcgacatacatgtttaaaggtccctttt
tacgaagaaagaattctagttcttaccgccttttgaatgtatttttaatg
ttgctgttgtccTAACAAACTTGgtatgtgattcttgtgttttattttat
atttgttcttttctttaacaggttctgtttaaaagatttcttttgttttg
aaaagaattcgaatgtctcaaatcaaataaggtcgttaattacattcgaa
aacataaaacaaaagaaaagaaagaaaaaaaaagaaaagaaaaagtctaa
tctatcaatcaaaacaaagtttttataaaaaacggcgcgaatagcgttaa
acaaatttgtggagcaagaacaaaataaaagtcatcttttggaagaacaa
aaacattgcgtgcgaaaacgaaagtagcacagacagaaagaaagacaaaa
cgacatacagactaccactattaatatatagattactAATATTGTATAAG
GTTCTCACTATCAAGTAGATACTAAGGTAATTTACCTCTATACTAGTCTT
TCTGGGACCTTGGAATGGTCAGCCGAAGACGTTGTCCCACCGAAATATTA
AGGCCATTGGGGAAGTGGTAAGGCTAAAAGAGGCTGAAATTCAAAGGGCT
GATGAAAAACAGACAGGTGGAAGGAACTTTCATTTTCGACGCATTGTATA
GTCAAAACGAAATCTGGTTTCTCCTGGCGTTATTGAGTTTGGTATCGACA
GCATAACTTCGTTTATTTTATCTTTCTATTCTTGGAATCTTGGAAACACA
gcaatacttcagatggtgataaaaggaTGAAGTTTGGCACAGGTGATGAC
CCTTAGAGGGTCCAAAGCTTAGTTTCAAACAGCaacacctggccacctgc
cacaTCAAATTTAGTCGATTGGTTCCGATATTACAAGCTTTTCAGTTTTG
CCTAAAGgacttatgatgacgtcatcaaaatttatttttaaccttcataa
cttttgatagggaTATTTTTCAAGGCATGTGTTGTACCCGTTTTTCATCA
GATTTTCATGGGCTCTCTCCAATGGTACTACTCAGGGGAATGCTGAGGTG
GATTATGGATCTTCTGTATACCCCCTAAATAAGATAAATGTAAGGAACTT
TTCCTTTACCCCAATCcgtgcccatgtcggcatatgctgacatgagcatt
tttgatttctttgccattttcgggatttgccgacatgcgaaatttcgacc
tatttgcccgaaatttatcattttttacaagatttttgtATTAggtggtt
tgaaatgaaaagaaTAAATAGTtacaaacttttctatgttgaagAATAAC
TATTCTACAATGTTCAACTTAAAATTATAGCCCTTGGGTAATACTTCATA
TTTATACagaaaatgaagtaaaaatcgctactttttgtccatgtcggcat
atgccgacgtgggcaaataggtcgaaccttctttttttcccgtggcaaat
aggtcgaaccttaaaaaatacgaggggcagttaaagggttaatagctaca
ttgaaatattcaaatataaTAAACTGAAGAACGTTTTGGAAGGCACTCAA
CAGTaattatcaaaattcattgaACAAATTAAGTGGAAAATGTTAAATAA
CGATTCTTACCTGAGGAAAGAAGACTTCATAGAGATATGAAATGGTACTG
TGCTACCATAGCAACCAAGAATGACGTTGCTAAGGAAATGACTGAAGTAA
CCATGGAAACCAACATACTTGATCTTGATAATAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004848TCONS_00004848Clytia hemisphaericatranscript
TCONS_00004849TCONS_00004849Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000049supercontigsc0000049:184191..187774 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.95	2.44	3.82	4.31	1.27	1.43	2.37	2.08	2.58	2.97	4.13	3.9	8.57	9.85	1.89	2.46	9.19	12.39	18.39	22.98	25.37	31.81	5.47	4.61	9.92	10.28	12.89	7.67	1.27	1.13