XLOC_002555 (gene) - C. hemisphaerica

Overview
NameXLOC_002555
Unique NameXLOC_002555
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000045:115228..122271-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002555 ID=XLOC_002555|Name=XLOC_002555|organism=Clytia hemisphaerica|type=gene|length=7044bp|location=Sequence derived from alignment at sc0000045:115228..122271- (Clytia hemisphaerica)
GCGGTTTTTCAACGAAGTATTACCAAACCGTCAGAAATCGAGTCCCGATG AGCATCCAGTTGGGTTGCTTGATTCGTGAAGTAGTTCGATCGAGGTACGT GCCAAGAATACTTACTAGGACCGCTCTGGTTGTTCTGATTAACTCAAGCT TTCCTTTGGAAAAAAGTCACTGCTAGTTTGTGGTTTGATCGCTTGCTGGT AAGTATTTTTTAATTTTACTCACATTGTCAGGAGTGCAGCCTAAGTGCTT GGACTTTCTTGTTCTTGTCACTGTGAAACTGAGCAGGTTGTTTAGCTGGT GTGTTAAAAAACAACCCACAGAGGTGGTATGAATGATGAAAAGGCGAAAA TCATGATAAGGGGAAGCAGCATGCAATAAATAAAGCAGCTCAAATAAAGA GGACCATAGTGTTCTGTGTTATGGTTTTCCCAATTTGGACTTTCTTCCTA TGATGGAGAGCAACTCAGGTGCAATTTAAAGACCCTACACACCGGGCTTA AAGAAACACATTCGGAGCAAAAAGTGCCGTTTTTTTCATGCTCCGGAACA CCGGAAGATTTCGGAGCACTTCCAGAGTGTTCCGGAGCACGATTTTCGGC GATTGGTCGGCACCAGAACTCCGGAACGTTTCGGTGCAGCAATGAATTTT GAAATAAATATACCTTTTTTCAAAGAACAACCCTGTTGAATAATTATGTA GTCAAGCCATACAAACAATGATACAGCAATGAATAATTACTGTTTCATGA TGCATATTGTAATAATTATGCATGGGTGTAACATTGTTTTTCTGCTGGAC TACATAATTATTCAACAGGGTGGCCTCTTTGAAAAAAGGTCTATTCATGT ATAAAAAGGTTTTCAATTTTTGCCTGGAAAGGCTTGTGATGACGTCATCA CAAAGCTTTCAACCTCCATAACCTTTGATAGAAATATTTTCAAGGCATGC TTTATACCTCAATTTTCATCAGTATTTCATACTCTTTCCGCTGGAACTAT CAGATTTTGAATATTTTCAAAAAAATACTTTTTGCCGCCAGCCACCTGGT GACGTCATCTGGCAGGTGGTCAGGTAGACAGGAGACCCGTCGTGTGTTTT TTTATAATTTGATGTACACAAGACGGGTTCGAGCTGTGAGTCCAATATTG GACTCACATTTTTTACAGTGGGAAATTCGAATTTAGCGCTGTCCTCACTT ACTAAAATAAAAACAAAATTTCGAAAGTTGNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAGTTGCGCTTTCTCTA AGAAAGTGTGACCAGTAAAAGAAAAACAAAATTTGATTGGCTATGTTTTC AACCGTTATTAGGATCTAAGAAATTCAAACTCTCAGCCCGTACCATGCTA TACATTTCGCCATCAGTTTATCAAAGAAGAAATCATAGCATGGATTCCCA GGCTAGTGGTCAGGTGGCAAAATTTGGTGTTACTTTTTGAAATTAATTTT TAAATCCTCTAAGGATCATATGTGCCAAATTTCATGCTTTTACATGGTTT CATCCATGATTTTGAGTCCCCCCTTAAAACACAAATCACCCCTTATCAAT TTATCCCCCCTTAAAGCTTAGAGATGGTTTTGAGGTGCCCCTTAAGTCTT ACTCCCCCCTTAAATTTGCAAGACTCTTATGTATACATGCCCTTAATTTT TGGGGTGTAGAGACAAGCGAGAAATTAGTCCNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAT ATACCTGGTATAAAAATCCCTACAATACACTTTTCTAGAATCGTTTTCTC CTCAAACTGATAGCATTTGAACGAAACTATTCCATATAGAAGCAGAACAG CAAAATATTCCAAATTGAATGTCTTTAAAAAATGTAAATATTCGAATCAC GGGCCATTCCATTACTGAAATGTGATTGGAGCCTTAGATGTAGTGTAGGA TGATGGCACACCAAGGAAACAAAAATATTTTAGAATGCAACATTCGAAAA TTCCATAGCTGGAATGTGATTGGAGCCTTAGATGTAGTGTAGGATGATGG CACACCAAGGAAACAAAAATATTTTAGAATGCAACATTCGAAAATTCCAT AGCTGGAATGTGATTGGAGCCTTAGATGCTTTGCAAGAGCCAAAGTCAAT TTTCCAAAGTGGTGTCCCCACCCACCATTTTCTAAACTTTTACTAATTCG TTTGCCTAGGCATAATGAGGAAGGAAATATTTAGTGGAGAAGAGTAGATT TATCTTTGATGAATGGAAAAGGGGACAACAGGCCCCATCATGGTTGGGGC TGACTAGAAAATTTTTTTAAAATCGACTGCCAAGCTACCCTAAATCACTA AATACAAATAGACAAATTGACTTTCTAGAGTGAAAAGAAACTTTAAAGAA AGAAAGTGTAATGCGAGCAAAGCGTGCGAAAAAATTGATGTTTTATGATT TCAATATTGTTGTCAGCATTGGTCTTGAGGCGCAGTTAGATTTTCATTTA ATAATGCTATATTGTACACAAAAAACTTGTAAATTAGCTAGATTGCAAAG AAGTTAACAATGAACTGTTTTGCGAGCGAAGCGAGGGAAAAAATTGCAAG AAAGGAACAAGATTACTCCCCCCTCAAGTAGCAAGGGCTTCCATTTGACC CTTGAGACCAAGTCCCCCCTTATTTCTCAGTTTTTAACATTTTTGCCCCT TGTGTTTTTCTCTAAATTTTAAATCACCCCTTATTTTAAGGGGGGGGGGC TGAAACCATGTTTTATCACCATCTGAAGTATTCTTTCGTTTTTATGTGCT ACCAGACCTCAATACTTGGATCAATTTGCATCAATTTTCATGTTTTGCTT ATCCAAATCGCTACGTTAAAAATGTGCCACACTTTGTATGGGCCATCTAG ACAAACCAAAACAAGTTACTGTGGTCAAGGATAGGTTCTTTAAGTTTAAT GGATTTTATGAATATAGATTGAAAATGGCTCTCTTAAAACAGTTTTAAAT GTAAATAAGTTGAAAATTTTTGATTTTAAAAATTTTTCTCTGGGCTACAG TGCTTGATTTTATAAAATACATGTAATGTTAATCTGTGTATATCAGTACT ATTTATTTAGATTATAATCATAAAAGACGAATAAAGATTAGAAGTATGGA TGAGTCTTTGGATGAAACTTTCAATGAAAGGACTCTGGAAATCCAATCTC TTACCCGGTATGGGCATGACTTGTTAATGAAGGGTTCTACAGTGGAAGCA AGCGAGGCTTTTCTAAATGCTTATCAATTTGCGAAACAAGAGAATAATCC TTATGTTGTTCGAGCATGCTCCTTCAATCTTGGAGCTTGTTATGTTGCAA GTGGACAAGCCAAAGTTGGATTAAAGTACTTAGAAATGGCAATGCCTTCT GTCATTGATGATGATGGTTTAGAGAATTTTTCAGATCTGTGGTATAATAT TGCTGTAGCACGACACTCGATGGGAGACATTGAACAAGCTAGCATTGCAT ATCAAAAAGCACAAGAAGGGTATAATAGGTTGGATTCAAGAAAACTTGAG GCTGAATGTTTATCTAAGCTAGCAGTTTGTTATCATTTATTGAGGCGTCT AAGTGAAAGTAAAACATCTTATTATAAAGCACATGAATCATATGAGCGAC TTGGAGACCGCAACAATCAAGCTCTGTGTCTGGTGAGTTTGACTGGAGTC TTCTCTGAGCTAAAGGACATCGATGGTTGTGCTAAAGTTCTGGATATACT TTTGGATGTGTGCCAAGACTTAGAAGACTGCTCGTTGCAAGGTAAACAAT ATATTATAGCAAGTATGAAGACAGATGTCAGCATTCCTTGCATTTCTGTT GTTTGATCTTTTGTTTACTGTGTAGCCAGTACATTTGCACTATCTTGGAC TATAAATCATTTGTCTTGATCCATATCAATTCTTTAAATGGAGAGTAATT ATCTAATAGAATTTCATTTCCCAATAGACAGGAAAAAATAAAGTTGATAT TCTTAACGTAAAAAGGAGTGAAATTTCTTAGAAATGAGCATTGAAATGTA ACTTCTTTTAGTAATCAGGAAAATACCCAGGGGAGGTCCTTTTTTGCTCA AAAGTTTTGCCATTTTTATGTTTTGCTTTGAATCCCCTTCATGTTTTATC ATGACTTTGACTCATTTCATTCTACTCTAGCTAAGATTTATCATGATATT GGCTTACTGTACATATCTGAGAAGCTTTACGAGTCGGCTGCAGAATGTTT TGAGCAATCATTGAAATCAATGGACAAAGAACTTGTAGAGAATTCGATTG ACAAACATTTGAAAGCCACTGTCCTTCAAAACCTTGGAGCAGTTTGCAAT TACATGAGTAGCTACCAAAAGGCAATAGATTATCATCAGAAAGCCATTGA TATTTTTGGTGAGTATACTCATTCCTTTTAGAGATAGTAAGTTAGTAAGT TAGTCTTGCCATTGTATTTCAAGGCTTTTTCAAGACACCCATTTTGATAA CTATAGTAACAAAAGGTAGCAAGGGTACAAATGAAGCCTTTCAATGGATT GTTTGAAAAACTCTTGAATATTCTCACAGCAAGACAAGTTGTGCAATACT TTTGTTTTTTCTAATTGCTGTATTTTGTAAACAAGATTTAGTGGTATTGA TTCATTTGATTTGCAGGTGAAATTTCAGATCGATCAAGCCAAACAGAAGT CTTTGCAAATCTAGCTTATGCATTCACAAAGACAGAAGACTACGAAAATT CCATAATGGCTTTCAAGCATGCAGTCAGATCAGCCAAGGATACTGGGAAC CAAGAAGCTCAATTTTTGGCTACAGAAGGGTTAGCTGCTGCCTATTTTAG AAATGGCAACTACGATAAATCAGTCCCAACGTATAAGGAAGCATTGAGTC TCATACCACCAAGTAAACCAGGGAGTGATAAGGTGTCATACACTGACAGA ATCGTATCAAAATTATCAGATGCCATGCAATTCCAACTTGAAATTCAACA AAAAGAAGCTGAGAGTGGTGATTCACCAAGGCGTAATAAAAACACAGCTT TTTACCATAAAGACTCCGTAAATACAATGAGGTTCTTCCAAGAAAAACAA CACTCATTGATTGCTAAAGGTTTAGAAGCTCACTCCAGTGATGGGGAGGA ACAAGCTAGCAGTTCTGAAGACGATCAAAGCAGCCTAAGCACCTCGGTAT CCCAAAAACAACAACAACAACAACAACAACAGAAAAATAAACAGAATTAT AATAACGAAGGGATGAATTTCAGCATGAAAAGCACATTGAATAAGAGTAA TTATTATGAGCAACCAGTCCAAGATGATGAGCAGATCCCAAGAGCAGTTA AGGAATATTATTTGGCGCAAGTTTGTCGAGAGAATAATGCTAAAAAGGAG GAACCAGCTCCTAAAGAGAAAAAAGAGTCCTCAAAGATGTGTCTCATTAT GTAATTTTGTAAGACTTATTAAAAAAAAGTTCTTCCATCTCAGACAGAAT TCCGTCTTGCCAAAGTTTTAAAAAAGGGCATTTTCTATTCCAAGATTTTT AGCAAAATGCAATAAAATATCAAGAATATTGGAAGAACCTGCGGAGATAA ACTTTGCTTGGACCACACTGCACTTATAAAAATTATATTATTATTATCAA AATGTCGTCACATTCCTAAGGAAATTGCTGCTTTACTCTACCTAAACCCT ATCATAGGGGCGGTTCAAAACTTGGGGGGCGGGGCTTTTCCTGTACCACC CCTCAACTTTTGATCTAGTTGATCTTTTTGAATTGAAATTTGGCACGCAA GATCCTTGTCATATAAGGTAACAAGTGAGGTAAGGTAAAGTGAGCAAAAA CCGAAAATTTCCTTTGTTCTTCTAAATAGCTAATTGTGATTTAACAAAGT TCCCTGAGTTTAAAATGCAAATGAACGGTTTGAATGATAAGAAATAAATT TGTATTGGAAAAGTGTCAATTTTTATGACACCTCATTGATGAAGAGATTC ATCATGCTCACAGTGTCAAAGTTTTTAGGTGTCAAAAATTATTTTTTTTG AAGCTGACTAAAAGTTTGGAATTAAAAAATGTCCAATTTTCGGTTATTAA CATTTTCTCCCCCCTCTAGTACGAATAGGGTTAAAAGAGTGTTTGAACCT AAATCAATTTTTACCCTCTCCATCACTGTTCACCTTTAGGGGAATATCAG ATGATTTTTTATATTTGGCTTAAAGATACCTTTTATTGTCCGAGAGACAC CTCTAAATCTTTTGACCCATTTTTTTTCTAAAGCTGAGATATTTGACTTT GAAATCTCTAAAAATGAGTCGTTACACAGTCTTTAGTTGAATTTCTATTG TTTTCAAGTAAAAATTTGAAAATTCAAAGTCGAATATCTCAGCTTTGAAA ATAATGGGGTCTAAAAATCAAAGGTGTTTTTTAGGATCATAAAAGGTTTC TCTTATGTCTTAGCCAAATAGAATTATCTGATAATCACTTTAAGTTTAAG TACTGGCTTTGTGGTTGTTTCAAACTTCTCGATATTATTTATTTATGAAA TTGCCATAGTATTTTTGGGGGGTAATGAATATCTTATATATTAAATAACT ACATTATTAATATAAAGTATGATTTATTGTGTATATAGACTTAATTATTT TGATTTTTGAGGATTGGTTTGGGGAGATAACTTTTTTTATTTTTTTTAAA CGTGTACATAATCTTTAAAGGTTTAAAGATATATTCAGTCATAAAAATTA TTTAAAATTTGGCTTAATTACATTAATAACTTACGTTTAATGTTTTGCTC CCATTTAGATTTTTACTTTAGAATGATTTTTGATTAGACTTTCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004542TCONS_00004542Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004542-proteinTCONS_00004542-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000045supercontigsc0000045:115228..122271 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.67 2.35 1.24 1.13 46.54 34.24 19.74 19.79 12.27 15.86 10.54 9.57 4.53 4.43 3.89 3.9 4.7 5.6 4.63 4.61 6.75 6.46 5.57 6.41 6.57 7.47 8.61 8.22 3.15 3