XLOC_002441 (gene) - C. hemisphaerica

Overview
NameXLOC_002441
Unique NameXLOC_002441
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000044:344909..350484+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002441 ID=XLOC_002441|Name=XLOC_002441|organism=Clytia hemisphaerica|type=gene|length=5576bp|location=Sequence derived from alignment at sc0000044:344909..350484+ (Clytia hemisphaerica)
ttaagaacattttaaggcattGTGGACTCTAACACATCCGATTTATTAGA
AAATTGTAGAAAATATTAACAGTGTGGtaaagataagaacatttttaggc
ttataaaaactccaaaagttaagaactcttgaaggctttaaaaactgtag
atgttctaataaaaaaatggtGCAAAAGCTAAATATAGAGGATGACATGC
TATAAAAGACCACAACAGCATCATATAGTCATCATCATCGCATTTAATGA
CGACCAGTGAAACTTGTGAAtgattataatgaagctctcaATACTTTTAG
TTCTTTTCTTCGTGGCCTTTATCCATGCTGGTGGCGGTGATTGCGGTAAG
TTTAAATGAAATCTATGATAAGTCGTATTGACTAGCAATaactttcatta
aagtgccaccgcagcaaaacgaacacatggAGTTGAATTTGCTTTTAAAA
GGANAACTCGTACAAatggcaaaaaaagtgaaaagtaataattatgacgt
atgtgttgcggagcgctatatagcgcaccgcgctggatctaaaaatagat
tttatttttgacataatcattactctcgatgtgtttgtacgagttccaat
cccatcaacctttgcgttaatgtCTTTTGCACGTCAATTAcatcgtttga
caaaagatatataacagcttgcacgtatctttaattgagccgcattgaat
tatgggattgcaactcgtacaaatgtcaaaaaaagtgaaaagtaataatt
atgacgtatgtgtTGCGGAGCGCTATGGTATTAGTCCTacaataattttt
gttaagagcatagaggtataaagaaagacaggagatgaatttgtcggtaa
ttggtcgttaaagttttttgatttcttttatgtaataaatcaaaagaaat
tatacgctcgcccgatgaaatacgactttttagtagaactcaagtttgct
ttgaacattcttactatcagcatcgaagatttctagccttctaatatacg
agaataaaataaaatttagctccacgaaataagtttgcgttcaattttgg
cNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNcaaagtttacaggcccttttttaatccaa
atattttcttacaccaatgtcagaaacaatggatCTCGCCTCATctaatt
tcactgaaataagccaataagatttcacctatcaacaaaagagctcatta
aaaatgcacgatatatgagattatgagcatgcatacctgcgagcatggtt
acaatagcatacttctcctgtttctttatacctccatggaaagagtgacc
tctcatctgatctgagacaaaattcattcttcaaatgctaacaaatgtgt
caagggagtgatttacagttatagtttcaaaagtaaaaagcccattttgt
tttggcgtctacttagagtgacattcGTGCCTTgccttacacgctttttt
ataagaacaattttataaaaatacaatgctggactttggccaaaacctaa
gaacaaattaagaacagtctttACTTTTCGGTCACTTTAGGCTCCCTGCG
GGGGCAAGAACCCGATATTTTGAGTCCTATGAAAATAATCTGGCAGTCCC
TACAGCCAGGGGTTACTGCTATGTGCGGAACTAGTACTTCAAACCATGAC
CTTTAGAGACACTAGAAATTTTGACGatagaatgtcaattttttacCAAG
CACACAGCAGCCTTTAAAAAACTATTGGTCAAGAAGAAACTGATTAATGT
TTCCGAATAATGTAGTCGAATGTTTCTATGActctatacacgttttttta
agaaacacacttttaagaaacatatttaaaaactaagaaacatctaagaa
atgCTGNgcgagaaaagattatgccactGCTTTAGAATTATAcaatataa
tttaagttttatgataattattaggaataatcagcatactttatgcatga
atcgcgcatcgtgaatcgtaaatcgttagatcgtgcatcttaaattacac
caacccgaaATGCTGGGGCTGAGAATGGGAAAATTTTTTAATTCGTTTTT
TTTaagaaccttccaatccagccttccatgaggctgattatgtcaaaaag
tttagaaacatgtaagaaacatttaaggctcaaaaggccgatttcttaag
aaataaaagtttgttaaaaaaatacaaaaatatatatatcttgaaaataa
agaaaatattctacCTAGATTTTTCCGTAAATTTGTCTGAGCCTTTAAGT
GAGAAAAAATATCACTAAAATctagaaacaaaatatttagttATGAAATA
TTGAGTGGTGTGActaaattgttttgtttatttttatttgtagaATGTGC
AGACGGTATTGGTACATGTGATAAGAGATATCATTGTGTACCAGCTTCTA
TAAATACTTGTAAAGTTACATGTGGAGTATGCAAGCCTACTATACCAGGT
AAGTGTCTAGCTTATAATCACCCTATTTTTaaccgccaattgccgcgtgg
AAATTTTTtggtccgttttaccaccctcaAACCGTCCCAATCTTTTTTTC
ACACCTAtcgacaatagaaaaaggtgtaaaaaaagNAAATTTTTtggtcc
gttttaccaccctcaAACCGTCCCAATCTTTTCTTCACACCTATCGACAA
TAGAAcaaggtgtaaaaaaaggattggaccaagtttagggggataattaa
ttAATagagtggcacgcgcctgactgcattactacggtcaaaaaggtgca
TTGCGTCTTTCTTGAAGGGAAAACTGCCACCCCAACCATTTACTGCaaat
ctaatttcaaacttcaaTTGTTCGTCTTAAAACGGGTTTAAAACGAAAAT
TTTGACATCATtagaaaattatgtttttagtTTTCCCAGACAACAGAAAT
TTTCAGTTAAAAAAGAAGGGGGTCTGAGCTATGACCAACTATGGTCAATA
GGCAAAGTACATAGATACTaaatgtcgtgctttggctgaaaagtgttcCA
ATGACCTAGGTcatgtgacattacaatagaatttcagcgcttgaccaata
agaagcttcgtaGGCTTTCGAAATCAATACACAATATTAGCAaaattttt
tgcgatattcattttttttgcttggaagagctttctgttcggaggtcaaa
ctattggtaatagttcctgaaataatagagcttttgccgtgaaattttct
gtaaattcctaacttttatttagcttcaaaataaaaaagaaattgacacc
taaatattttcacatcttgagcatgatgacatttctgacagtaagatgtc
acaaaaattgacacttttctgatacaaatttatttttgatgtcaaatata
tcttttaaaccgtaatttattgaatatttaggataaaataagcattttaa
actcaggcaactttttctAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNAGaagaagcccccccccccccctagttctgaa
ccacccctaaaagcttaggttgaatagggttaaagtacgacatctagccc
ttcgggatttacagaaatctgtggcaGTGTGCCGGTAAATTaagcttttt
tactttttaaaacgtaaattgaatagaaaatagcatgGCAACGGATGCAC
GACTgttatgaaataggctaataaaTTGGCTTATCATTCAATTAAgtgaa
aaatagcctaaatcaCGCATAAtgcaagaaaaatttgaaatcaagccATC
GCGCAAGAAAAATCCTAGATGATGCTATGGTCCGTTAGCCAGGGAAACGG
ATAGTAAACGCAGGAAATATACATGTACAGAGTTACAGCCATCACGGCCG
TTTACGGGAAAAAATAGTGGCAGCGGAGTTTGAAACAAACGCTGTAAAAG
CAAGGCCTATCCAACACTATAAACACCACCaccactgcttactccgcccT
GCGCTAAAGCCAACCAATCAAGCAAACCGCTTGGGCGTCAATTAATATGA
ATcaaagagaaactttgataaacattgcaaatttagtgaaacacacaaaa
gaactttctttctatagaagtggtacgattcaaaacattttttcggAACA
CCCTGTACTAAATTagaaatgttgattttttcacgaaaactttttcttct
ttttaagtTTATCTCAGTACGTAACC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004365TCONS_00004365Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000044supercontigsc0000044:344909..350484 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.15	0.15	0.74	0.44	0.18	0.49	0.23	0.43	0.83	0.09	0.27	0.66	6.74	6.4	0.31	0.1	0	0	0	0	0	0	0	0.13	0	0	0	0