XLOC_002418 (gene) - C. hemisphaerica

Overview
NameXLOC_002418
Unique NameXLOC_002418
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000041:526644..530260-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002418 ID=XLOC_002418|Name=XLOC_002418|organism=Clytia hemisphaerica|type=gene|length=3617bp|location=Sequence derived from alignment at sc0000041:526644..530260- (Clytia hemisphaerica)
CCTTCCTATATTTCCAATTCAAAAGGACTGCTTCTTTATAACTTCAAAAA
CTTGAGAAAATTCACTTCAAAGAAGGGGATTTTTTTCTGGGACACCCTCA
AAACAATGCAATTTGTGCCTGAAAGAGGGATATCATATTATGACTTCAGA
ACTTGAATTAATTTTAACAAGACGACTCAGAGTCGAAAATTTCGCATAGT
GCTCGATTATTCGTAGATAAAATAATCATATTAAACGACCGGGGAGTACT
AGGGTTGGAGAATATCAGGTCAGACCTGAGAAAACTGGCCCTAACAGAGA
ATAAAGCTACCCTTAGAGAGACAAGGCAAAAAAAGTGACTCTTAAATAAA
GCACATTTTCATTTTCGACTTTTTAAGTTTTTCGTACAGTACCTTAAATA
ATTCAGAGACTTGGGAAGGTCAAAACCAGAATTTTAGCATCAGCACACAC
CTGACACCTAGTTATGCCTAAGTTACTACCCACCCTCACCATTAATAGAA
TGCAATAAATAGAACGGGACTAACTATTGGAATTTTTCCTTCGTGATTGC
GTGATGAGAGGTCAAAACGTGATTGTGATTTAAAAGGTTTTTGAGCCGTG
CTATGTGATTTGGACTTTTTCAAAGGGATGCGTGATTGTCCATTTTTTTG
CTGATTTGCGTGATCGTTATTGAAGACAAAAATTGCGTGATATCGTGATC
AGAGTTACCGCTTGGTAATCGATAGATTGCATATCAATAGATTTTAAAAT
AATTGATAAATCCAGATTTTAAGGGAAGCGCGATTGGCAATAGATTGATT
GATTTTCCATCGATTGACTTAAAAGATGTTCGATTGATCACAATCGACAG
CCCAGAACAGCCAATGAAAAAAATCTACAATCAATCTATACTCAAGACTT
TAGAATTGTCTTGATTGATTACCTATTGATTATCAAAATCAATCGATATC
CAATCAATCGGTTGGTTAGCGATTACTCATCGATTGGAAAAAGTTATTGA
TTGTATTGCGTGGAAAAGTCTGGAACTGACACATTGCACCACTACCTGCC
ACATAGAACTATATAGAACAGCATAGAACTTCTATAAATTATATAGATTG
ACACCCCTTGCCATAAATTCCTCTGTGAAATACTTAGTAAATGATAATCT
GTAAACATAAGATCATACCTGCTGTCTGTGTTGTTGTTTATGTGTAGTGA
TGTTCAAGAGCAATTCTTTAATTATAAGATTCCTATCACTTTATTGGTGC
ATTTACTAACTACACAAACATAAAATACTACGCTAAAAGAAATATAAACC
TCTTTAAAGCACTCTAAAAAGACCAAAAACATGATAAAAATACAAACAAC
CAAAGCATAAAACCTGACAGCATGCTGAATACGCCATTTGTTAAAAATGA
GCAATGTTTACAAATGCTTGGTTACGTCTACCTAGCACTTGCGGACTGAA
ATTATGAAACAAAATGCGAAATTTTATCTTAGCGAGTTAGTCCATCTTTA
GAATTTTATTAGAATATTCGAGAAGTTTCTAACACCGTGGCCACCGTGGT
CAGGCACTTTCGTTTTCAAAATTTTATTCCACACCGACGACCACCGCGAA
AGGCTATCGTAATACTTTCGCTATGCCAAATTAATAAATGTTAGGAATTA
ATATCCAAATGTGGTCTTTTTCATACATTATTTTTTATTACCCTTTTATA
CATATACATACATCAATTTTTATTGCACCGATTATCTCATTTTATAAAAT
TTTTCAGCTTTTTGAATGAAGAGAATTTCAAATTAGGTTCATTTTATTTG
TACATGTGTATATACATAAGTGCAGTAGTACGAAAACTCTGACTAGTACA
TCTTTTTACTTTCTGTTGTGACGAAAGATATCTTTTAATATTTTAAGTGC
AAAAATAAATAAATAAAAATTCTAATAATAAGGTTGATGAAAATCTACCA
ATCAAAATTTAAAAAAAATTTTCTTTAGCAAGTCCATGCACCGCAATTGT
TTTGTACTGATTGTATGACTTTTGTCTGCTCTCCTCTGTACACTGTCCCC
CGTTTTCGCAATTTGTAAAAAACTAATAAATTGGGTGGTTTCTACAAGGA
TGTGTATTAAAAGAATGATTTCCTATCGGGCCCATTTTATTAAACTGTCC
TTATTGCATCACTGCATTCGGTCCTAAACCAGACCCATACCCATTAACCA
ATCATATTTTGGACTGATGACGTGATTTTAATGATTGAGACTCCGCATTT
TGAAAATTCTAAAACATGATGTGAGTTCTCGAGCTCGTTTGTAAGTGGAG
AGGTCATTTGGGAGACCCAATTTTTGTTGAACTTCAGTTGAGCTAGAATG
TGTGTGTATGTCCACGAACATACATATAAAGCGGAATAATTGGTCTAAGA
AGCTGAAATTTGACACACACATTCCTAAGGTAAATACCCAGGGGTGTTAT
TTTTTTCTCTTCACTTGAGAAAATGATTGACAGATTAAAGTTTTTCACCT
CTCTATCAATCTATCTATTGTGGTTGAGTTACAGGAGGCTCTTGAGCCCA
TTCTCGCAACTATAGATGCTTTTGAGTAAGCATCCCGTCAGCACCTTGAA
CTGACTACCCATTTCCCCTCACATGGCATGGGTTGACCTGGGCCAAGGTT
TGTTCACTTGCCAAGTAAACTGTCGTGAGTGGAATCGAACCTTGATCGCC
TGTACAGGAATCAAGGTTGGTGTCCACTATACCACAATGCGGGCGTTCTG
CGAGCATTCTCTGCTCAATCCACAGACCGTGCTAAACTGGTAGACTTAGC
TGTGACAGATCATTTCAATGGAAGTTGTTGGAATGTTTACAAGGCTCTTG
ACAGAAAATCCTTTGTTTTATTGTCAATGATGACAGTATCGTTATTAATT
TTGTTAGATCTGACATATTGATATTTGTAACTTGTAAGTGCACTTTATAG
TTTTGATTCACATTGAAGAATCATATTTTGGTTCTCATGTTATTAGATGC
TGTTTTAGAACTTTAGAGCTAGCCTGATTGAATGACCTGGCTGGTCATTA
AAATACAAAGTTAAATCAAAACAAAATCTCCTAATCATGAAAGTGATGTC
ATACATAATTATGTTTTGATCATGATTGCATGTCCGGCAGCCATCGAGAA
ACATCTGAATTCCTGCCATCTTAAAATAGTATGATTTTTTATTATCCTAA
CCACGTTGTTTTATTTACGCACAATTATGTCGGCGAGTAACTTGTCAAAA
ATACTTGCGTGGCAAATATGAGATTTTGAAATGGTAGAGTAGAGCTGCGA
GCGGCGCTTCGTAGTTCTTGCACTGTTGTTACGTTTGTTTTGAAATTTGC
TGATTTGGTTGGTCAGAAGCATCGGGCGGTTCAAGTTATAGTCTGCTGTT
ACCCCCTGTGGATGACATGGATTTTCCGGAACAATTTACTTTTGAAAAAC
TTCAGGATTTCCGTAAAATTCAAGATTTTTTATGGGAAAATGTTGGATTT
TCTTATATAAAATGGCAAGAAACAGTGCGTCACAAACAGCCATATAAACA
AAACTCAACATTCTCACAAAAGTTGTCTTTTTGATTTCCCAAACATTCGT
CTCAAGCGTTCCCTTCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004338TCONS_00004338Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000041supercontigsc0000041:526644..530260 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.41	1.31	1.83	1.81	1.07	0.86	0.63	0.9	0.94	0.94	0.89	1.13	0.85	0.65	0.85	0.97	0.7	1	0.87	1.05	1.18	1.35	0.43	0.77	0.42	0.83	1.34	0.86	0.89	1.13