XLOC_002364 (gene) - C. hemisphaerica

Overview
NameXLOC_002364
Unique NameXLOC_002364
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000041:714915..724637+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002364 ID=XLOC_002364|Name=XLOC_002364|organism=Clytia hemisphaerica|type=gene|length=9723bp|location=Sequence derived from alignment at sc0000041:714915..724637+ (Clytia hemisphaerica)
cagatgaaataaaaagagaaaaaaatcacaatcagAAACACatgaaaaca caacaaaatgATGCGTAAAAGCagacaagaagaagaagaagaaaagaaaa ctgAAGAAGAATCAACAATAgaatcaatttctttttcatctaCAGACAAA AATATGTTTGGCTTAAACAAGAAAACGTTTGTCATGTACATGACGCATTT TAATATTGTGCTTTATGCGTTATGTTATTGGATACAAATTGGAGTATTAC CGGTATGTTGATGTGTCTTtcagtttttataagaaccagtacacacgata cgtcactttttcaattgtttaagtgacgtattgggtggaacattttaaaa gttctcagaagactttccagtggtgcatatcatgaatacaaagCTTAGTG TTTATAACATAACTTGTGTTTCTTTCTCTCAGTATTTGACCAGAAAACTT GGTGTGGACACACAAACATTTGGTATACTACAATCAACATTCGCTTTTGT TCAACTTTGTGGTGGGCCTGTCTACGGGCGTTTTGGCGATTTATTTGGTG GCAAATACTCCCTGATATTAGCCTTCTTTGCATGTTTCACAAGTTATGGA TTATTAGCTGTTGCAGCGAGTATTCCGGTCCTGTTTTTATCACGCTTACC GTCAATTGCTATGCATTGTATGCAAGGTAAGGATaaaaattgaatctcaa tcaatTATCACTTATTTATGGCCTTCATGTTTCAAATTAattcttttaaa acaaaacGCTAAGATTTCGAAAAGTCTATTCGACTCTTTTTTGCAGCGAA TGGGAAATTGTCAttcattttaaaagaaaagtttatatttttcatCTGCA GGTTCACAGATGGTCCTAACAGACATCACTTCTGACAATGGTAAGGTCAT CTTATTCTGTATGTCATtagactttttccaaaaaaaattgtgcaGCCCTA GTCCCTTACTCCCATTTTTGATGGTTCTTATAGCGCTTGTAGCACCTATA GCACTTGTTTATGTCCAGTGTAATCAAGAAGTGATGCAAGTGACTCCCGG GGGgtgggggcactgaccttgacggccaaTGGGAACGttccgctggagtt tgaaaaatggaccctgtcagatatgaatatttggcaaatttgagaaaaat cgaatttctttgacaaaaatttcaaaattttttctttttgaaaattttga aattttcttgtgGTACTATATCGAATTTCCTAAGGTGGAAATGTATTTCC TAAAtgggggtcttgacccctctagagaCTAAcgtccaaatttttttttc tctttacagAACGCGCAAGTGCTATTGGTCGTCTCGGTGTATCTTACGGC GTTGGCATGGTGATCGGCCCACTCATGGGTGGGTTTATTACCGACCGCTT TTCAGAGCAGACGGCCGCCGCAACGGCCGCTTTCGGTTCCATTGTCAGTA TTGTATTGGTGGTTTTATTCATACCGGCAAACACAAAACTCATTAAAGAG GTTGACGAAAAGACAGAGATTAAAGGTTTGTTGATGTACGCAATATTTTG AGTAGTCTTTACAAAAAATTCCCATGCTAGAAGCCAAGGCTAGGCGCTAG CTTTCGTATTTTCTCAGTCTCCTTAAAATGTCTCCTTGTGGTTTTCAGTA TAATTTGTGAACCGGTTTTTGTTtgatgggctattccagaaatagtctgt atcccctatgttgaggaggtgtgacgtccagggtggtctggaaaataaaa aatgcaggGTGGTCGGTAAAATTGGATAGAAAATCCAGTGTGGTCAGTAT AACGAgctcgaaaatccagggtggttcaAAAAATGGGAGAAATAAATCCA AGGGgtcctgaaaaataaagaaaaaatccagggggaacgtctttttgaaa aaagacctcctcaacatagggggtacaatttttttctggaatagcccatt gttGCTTAGCTAaatttcgttttcagcctcaaaTTATGCTTGGTCAcatc aacgatgtaaaaataatagataaccaacttgccttgattctcaaaaaaca cccgtgttacggttgtaaaaatattaatgacattttgcatcgtaaaaagt gcaattaattaaaaacttgcttcatttgcaaccttctattggacagaatc gatcacgtgatgtatatttttccaaaatttgggttagaaaaagtgtattt tcctataggcagcctcacagaaggaattttttaattagatattattgttc tataaacattcatctatttattttgtatcaggtaaccttcatgcactttt cattcgtgagatatcgcacttcaaatcacacatatatttttcagataaca gcattttatgagcgtttatttatccagatgaagattaagtggtatcaggc cgatccgtagtcaatttgtctaaagattggtacctttatcttttgaaaat aattccaaaatttgcagtataaataacaattcaaattttctatcaattca gtggatgtcaaaaagtgtgtcaaaatctagctaaaagcataacacgcNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNacaatggttgttctcttgggagaagtgccttctaga ggtagttggttatctattatttttacatcgttggtcaCATACTTACTCGA AAGCAAcatattcttacgttttttattttagaattaTTCGTTGTCTCCCT CCCTATCTCATCGATCCcattttcaaactaaaatttgaatGATGAATTTT ACCAGCTTTGAGCTATGCTTTTGCACTGTGCctattttattgcaaaattt gcGCCTttctatgcttataaacgttatggtTCTATAAGAAAAAGAGTGAA CTGAAATCCTCCATGATCTTATTAAACTTCTTAGATTTCTAAGAGTTTCT ACGAattcattttaaaaaatattcttgtTTCCGCGTTTACTGGGAAATTT TTATCAACATTTCGATTTGGCGTATTTCAATTTATAGCTCAGGTGTCAGA CGTAATCTgtaactacaatcatggacaaaattatCTGAGACAAAGCGGAT TTTcctgtgaaattttaaacaccacaaatgatttttaagcgcgttaaact acagttggaaagtagagttttaactctgagttttaacataagaCTTAAAG TCTtgggaccttaggatctgaggatttaaaagctcaattaatttgctcca ataaggtTTGGAACATAGCCTAAAAACCaccgaacccctccaaaatcgaa atattcaatgaaaaaaagtggaagtactaaaatagcaattctcgcccgaa ttttagagattctgaaaaacgttaaaattcactaaaatctcaatatgtat cgaccatgattgtagtcaTACAGATGCCTGATTGCAAACAGCTCTCGATG TGCCTCGCTTTGACGCTTCCAATCAGATTTAAAGAATGTGTTTTTCGTCA AATACgtgaaattcacttttttgttgTTCTGATTAAACCAGAAGGATTGT GAAGGTTTCTAGTTGCTCTTGGAAATAGTACAAAATGTTATTTAGCCTTT GATAACGACACATTCTTATTGAATTGGGCATTGGAAAAGTCTTCggcaaa gaaaaacatgtttttaccgagtgaaaaaaagttagagcTTAGAACATATT TACAATGCTGCAACAAATGCCCTAAATAAAAAGATTAATGACGACCGCAT GATCCCCGATGATGATGGTCTTTCAATTATTAACCAACGAGTCTTCGGCA AGACTGATGTAATTAAAAATAACGCCCTATTTAAGTTATCTTAAATTATG ATAACTTTGAGCGAGCTTTACGTGTAGAAATTTCAAAGAGTGCACGGTTC AAATATTCTCGTGTATTTCTCTTCGGTTTTAAAAGTATGATGTAAAGTTT GCTgccataaaatatcaaaacaaataacAAATTAGCAATGGTTATAATCA ACACACGAGCAACTATTTTGATGTCTTTGTCTTGCTTAAGAAATTGGAAT GGAAAATAGGTCATGTATGTCATGATACTTGTAAACGATGAATAAACGAT TGGCATTGCTTCATTGAAAGGTCCTGGAAGATTACGACCACGATAAGCTT GGACAGTTGAGATCAAATGTAAAGCTATGACCAAAATGATTTGAATATTG TAGTGTGAATGAGTCTTGCATCGGTATATTTTCTTATATTCAGAATGGTC GAATTCAAGCTCTGTGTTGACTTCACTGTATACAGTACTCATTGCCAACG CTGAGGAGTCGACCATTAACAAGACCGACACcagaaatatttgagaaatc aaaatatttcttttctgcTTTTTATTCAAACGAAGTTTCGAATTGAAGGC TAATAAAAGACTTTGACATTTAATGAAAATCAATGTGTATGGCGAAAACA CCAGCATTGAAGTGACCAACAGCTCCATCAAACATGTCTCTGGTGTTGTT CTGAAGATTGTAAATTGCAAAGGGATGAAGAGAAATAACAATACCATTGA AAGTCCATGGACGAGCATGATGTTGAAATTTGATCCTAACACGATCACTG TTTTCCTATATCTTACGAAAACCACCATTGAGAAGAatgtaaaaataatt ccaatACAGCAAAATGTGATCATGATTTTTAATCCAGTCTGGTTGTGGAA TGTTAAATATTGGTCAATGTAAGGGTCATAACAAGCATTTCTCTTTTCGG TGGAAAGTGTCAGCTTTGGACATTGTGAACAGAAACTGTGTAGTTTTGTA TCATTGGGTTGAAAGTGATTGACAGGACATTGCCGACAGCTCCATCCAAT AGAATCATTGCTCCATATTCCAAGCCTGTCTTTAGGAAGTGTACCAAAGT AGTTCCCAGTGCCTTTTTGGCAACGAACGATTGAGCATGATTTTAACTCT TCTTTATGCTTTAATAATCGGTTTGTTCCTGGGATAAACTTGAAACTCGT TTTGTAATCTTTTGTGAACGAGAATCGAACCATATATGGATCTCTCATTT CGTTTGACGTCATTCGTGTTCGTTTTATCAACCCTCTTTTGAATCTGTCG AAACCTAATGGTAACCAACCttggaaatttttaataatttgaattaattt taTGAAATGGTTTTCAAATGCACTCATACAATTATAAACAGTCATTCTCT TATTTCTTGTCAAGCGTGTCAAGTTAAAGTGTTGAGTAATGTGTAAAAAA ACACCCTCCATATCAATGGGTTTGGCTTTCTTTTTAAAAGTCTGTATTTC AAATTCGTTGATTCCGATACTAGGTTCATGGCCTTTTGGCATATTTTCTT GGTGTAAGTCCAATACccaaaaaaattgagttttaactttttttgttatG TTGTTTATTGTCATATAGTtggtaagatgttgtagaaatttTACACTGTC TCTTGGCCTTCCGATGAGTACTGATAAGTGAGTGTCCTCAATTGAAGCGA TATACTCAAAAACTGGATCAGTGCTAATGTTGGTAGCTGTTACATTTAAA TGATAAAATCTGGGACacaattttaacattttggctttCTTGTCTAAGAT ATTCTTAAAGGTGTTATATTCCAAATTGTATAAAAGTGACCGGCTCTCCA AATATATAACTGCGAAATTTCGGATTTGTTCTAGACTAGCTGTCGGACGT CGTCCACCTAAGTTATTGAAGCTTGTTGCTGTTTGATTGTTGATTAAGAA GAGTAGATTTCGTGCGTTTACATCAAAAGCTCCTCCGTTACTGTGTATAT TTTGTTCGCTGACGTCGTTCGAGATTCGTACTTCGGTATTTACCAACCAA ACAACGAAGTCATCAGCCAAAAAGATTCCTtgtaataattttgaaatttc ttttgatgCGTGTATGATAACTAGTAAAATTCTTGAAGTGTGTTCCCAAG ATATGATGGTCCTTTTGTTCCATTGGGGAGGGTCGTGTGTTTTATTGGAT ACAAAATAACTCTGGTTTAGTTTCAAGTTCATTGCAATTCTAGATGCTTC GTctgattgacaaaaatttattaCTTGATATTCAAAATCATTCATGGTTA GCAAGCCATCCATTCTATCGAATTCCCTTTCTCTTATGAATTCATTCCAA TTCAATTTCTTGTTTTGATAAGCAAATTCAACAGTAGTTTGACAAATATT CGATTGAGTTATATTCACATCTCCTGGACATTGTTGATAAAGTCCAACAA TGATCATTGGTTCATTTCCTGGTCCCAATGTTCTCGATAATAAAATCTCA CACATGCAAAATGCGAACAAGAATGCAAGTAATGTTAGCAGACCCATTCT TCAAGCTTTCACACAAAGTAAAATATAGTTGCTGATCCCAGACTTGAATA AAACTTGTTATGTATAAACTTAAGGTTAAAATATGAATCAGTTATAGCTC TAAGCTCTAGGGCTTCCTTTTGGAGAGTGTTTTAAGTACTGAGCGAGGTG ATAGATATGACATTTTAAAATTCGCCCCTTCACCAAACACTTACTATAGT TTTCATCTTGATTCTTCTATCCTACATATAAAGTTTAATTGTTAATGAAA CCctcaaataaagaaaatactttttattttttaacaggacttttaaaagt gaaaaatgacaGAGAtgtactttttataagaacattttcatgATTCAAAA CGGTTCTTAATATTGGCGTGAATTTAATACATAAAATCTGAGCCTCAAGT TTTAGGTATTCTTAAGATTGTTATGTACTTCTAAGACaacaattcttgat atgcgtaagtcatttttctagtggaaacacccgaaaaaagccgggatttg accccctctctgttactaaaaatagaaacacggaggtcaaaatccggctt ttttTGAGTGCTTCCGttgaaaatatgacgtcatcttgacttactcAAGA ATAAGTTGCTTTTTGGTTTAAAACAAATGTGACTAGGATCTACTGTTTGT GTTTGTGACtgaattttgttttgttatgaTTGTTTCGCACTTCAAACTTC CTTATTGATATTCATCCAAAATCTTGTGGATAATCAAAGCGGCCCATCAA CCTGGGCAGATCTCTTACTGTGCTATAGCTTTTACGTGTCATGCGTGGAA TAATCGGAATATTCTCGGAGATTAGTATACTGCATACTGCATACTTATGT AGACCTAAAAAGCACAAGGACATGCACTCTCGCAATCTTTTATTTCGATT CATCAATCGTTGATGTAAAATTTTAGTGCTAATAAAACTGTTTTTGCCGA AAGGACTTCAAAGACTAACCTTCATAAAAGTACATGTTTCAGGCTCAggt ttatgaattttttttgtcaataactAAATATGTACCGGCAAACTTTACAA TCGAAAGCTATCTTAATTACAAGTTTTAATAACACAGAAATTAAAATAGA AACCGTACATTTCtaattcttgatttttgttATAATAAAGATTCATCATA TGAGGGAGTTAATCTtgcatttactaaaaatagacaaaaagaacgacaca ttttttaaaagaacgacaaattttaaaacaacggcaaattttaaaaaaga acgacaaatttcgaCATCCACAACTTCGACCCCGGATAAATTGTCCGCCC TAATGTTTTGATTCCTCTTTATTTATTGCGAAGATTGACGACTTGTGGTT TTAAAGTACGACAAactacgcatgcgtgttatacTGCAGGATTCTTCACA GACTTTATATAcactatttttataagaaaaaacaaaacgaAAATGGGCAA AAGGAAATAACGCTGAATCATTGTATTTTAAGCAAATTAAGTTCAAGTTA GTCAAAATAGGGTATCAAGCTTAAAATATCACAGTTTTGTCCTAGAAATG AGCACAGAATATGGAGTAGTATTTAGGCTCAAAGTGTCAAAACCGTCGAG CCTGaccaaaaatttattcttataaaaaaagagtgcgCACCATTCTTTTA AAAGGTCATATCTGGACATAAAAAGTACACGTCATAATAATCTATCATAG TGttcaatgggctattccagaaaaccctcttagtgtggtcgtgttacaaa agtacaggctgtttgtaggaaaaaaataatatatagctgaaactttctcc agaccttctctataggatgcttatgcctcNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNCCAGACaacatcatgtataccattcgaaagctctcaaaaaa ctatatagaagacttttagacgggtatagccgatttcattacctaactcg agataattcacgcagatgatgcaatttttggtcaattcAGAAAACCCTCT ATGATGAGGAGgttgacgtccagggtggtctagaaaattaaaaatccagT CTGATTATCGAGTATTAGAATCCAGGATCAGTaaatgaggttgaaaatcc aggatGGTCAATAgaacgaggtcgaaaatccatAGGTGGTTTGAAAATAA GACGTCCGCGGTTTAGAGCTTAACGTTTGTAGTGGATCGTCTTTTTTAAT AAACGACTTTTTTTTTAAGGAGCAGTTCTTCAAATTGCATCAATTTGTAC CTTAATTGGATTTCGATTGAAtcaactttcgcgaatttccaATTCTAAGA TGAGGGTTTTTGCTAAAATCTCTGGGAAAATGAAAGGAATTAGGTTTAAC AAGAAGCAGAtttgcgaaattttgtccaagcaaaaattttagattctcAA TTCGCTAAAAAAAGCCCGctgaaaaaagtcaaattttatccATTTTGGTA GTTCACTAAATTTTGATATANTATTAGAATTCATTGGTAATGGATGAACG TGGttaaaaatcttgtttttaacGTATTTTGTGTGCCTATTTAACGTTCC CACAGTTCCTTCAGGTGCCTCCTATTTATGAAATGTGAATAACAAATTCA CAGATCCCTAACATGAGATGGACTGCTCTCTTTCATTCTATAAACAACAG TTTATTTTTTGCTAATTCTTCGACCAgccaaatatttttcattttagctG NTCCGGTtaaggagtttcttaaaatcagtgtttttcatttgtaattgtgc gtaaatccGATCAATACATAGATCAATAGCCATAGTCGggttcgatttcc cgatctttcTGGTTTGATTTCCCGATTCGGTTTGCGTTTGCGCTCGCACT AACTAGGATATACTCTTCTACATTTTATGTCAGACatattaagaaaggct gaccCATGACAATTACCGGAGTTTGCAGCCGTCATTACGGCTATTTAATT TCCCAGTTAACAATATTTACTTCCCGTTCTTCCACAGTGGCATCCGGTGC CGTGTTCGATTTCAAGAAATATTCATCAATCTTCGCCGCTCCAAACTTCT TGTATGTGTTCATGATCAAAGNC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004258TCONS_00004258Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004258-proteinTCONS_00004258-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000041supercontigsc0000041:714915..724637 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.88 13.17 5.5 5.69 24.61 18.66 26.87 29.37 19.99 26.83 20.2 13.88 15.14 13.31 14.53 19.55 26.04 29.56 14.89 19.54 22.23 22.62 26.49 30.21 13.16 16.08 24.25 17.69 32.29 26.64