XLOC_002298 (gene) - C. hemisphaerica

Overview
NameXLOC_002298
Unique NameXLOC_002298
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000039:467181..471897-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002298 ID=XLOC_002298|Name=XLOC_002298|organism=Clytia hemisphaerica|type=gene|length=4717bp|location=Sequence derived from alignment at sc0000039:467181..471897- (Clytia hemisphaerica)
GGGGGGGGGGGGTCTTTTGAATAACTAATTACTCAAGCAGAAATATATTT AATGATAACGTCATTTTGAAATCATTTAATAATTATACCTTTTAATTTTT TGGTGCGCTATTGAGGGAAATTTTAGAAAGACAATGCAGTTTCCATTGTT TGTCAAAGAGGCACTAAATTTTCTAGTTTTTTCCACTACTAAGACTGTTT TTACCAAAATTTTACTGATTGCAGGAGGAGCAACGTCAGAATCCTGTTTT TCTGCAAATATAGCCAAAAAATATAAGTTTTACAACAATTATATGCTAAG CCAGCAAAAAAATAATGCAAACATAGTGTCCTCCCTCTTTGTAAAGGGGG ATTCTGATTTTGCCCCAATTTTGGAGGTATGGGGGAAAATAAAGAGGGTG GAAAACTAAAAAATTTGGAAATTTTGATTGGGGGAACTTCACTGATCTCA AGGTAATCTCGTGTAGAAGACCTGTTTAAAGCAATAAAATCAGCAAACCT TACTTAAATCAACCTCAATTTTTCCATAAAACTTCATTTTCAAAAGCAGT TTCAAGGCATTATTTACAAGATTTCCAAAACTTTAAACTTGATTTAAGGC ATTTCTGGGCATTTTTAGAACGCAAAAATAAGGGGGGAATTGAGAACAAT TTGGATTTTTAGTAGGGGGAACCAACCCAGGAAGACACTATGGCCAAACC AGCAAAATCAAAGTCATATGTAAATTACTTGCAATAGAGATTTTGTTATA CTGCTCATTCAGCATTTTATTAATTAAAAAAATTCCAAAAATAGTAAGAA CAATTGCAATTTTTTTCTGAACACACACACTGAGTGAGTTTGGATAAGAA TTTATTGTAAACTTTCTAACTTTTGTATGTTACACAACAGAATGATAAAC AAAATATCCCAGAAAAATTCAATTTTATAGTACTTTTTGGCTACCCTTCT CACCCTTTTTTAAGATACCAGCAATAAAAGAATTAATGCCAATTCTTTGC TCAGCAGTCAGAAAGGAAAAATTTTCTTTCAATGAGCTATTCTGACCTTT CTATTATTTCTATCTTAAAAGAAGGAATCACAGGGGTTTTTGACAATTGG ACCAACTAATGGTATCTATTGGAAAGAGGACTTGGAACACATATTTGGCA TAAATGTCTCTTTATTGAAAGGTACCAAAAGTTGCCTAAAGTTATTTTTG TGTGTCCTGGAAAAAGTCCTTCTTTTATTCCTTATGTATGTCTGTGATTT TAGTATTGAGCCCCTTATCTTACCAGGGACTTCATCTCCTTGGCAACAGG TTTTCTTTTAAAATACTTTCATTAAAGGGACATAACAGTACTTGCGAAAT TTGTAAACAAACTGTATGCAGCGGATACAAAATCAAAACAAATGTCACAT GTCAAAATAAAAAATCAAACCAAANNNNNNNNNNNNNNNNNNNNNNNNNN NNNNGCTAATTTTTATTGTTCAATTGTTTTACAAGTTTGTTTTGGACACG TGATTTTCATTGTTCTCTTTAATGACACGTGGTTCGCGCAATGTTTACAT TTTTACTACTGTAATGTCCCTTTAATAGTCTTTCAAGGAAGGAATTGTTT CATTGTTTTTCATTATGAAATTGCTCATTCCAGGTTCTTATTCTTCTTCT TTTTTAGAGAGTATGGCAACAAAAATTGCTTTTAACTCAGACGATAAAAT AGTCGATCAAAATGCATGTGTGGAACAAATCAATGTCAAAGATCTGGAAA AATATTTTGATGTAGACAAAATTGTGCAATATATTTTACAAGGAAAATAT TCGGTTATTGCATTGCAGTTTCCAGATGAATTGATGACTTACTCAACTTC TATTGCATCTGAATTAAAATCTAAAACAGAAGCTCAAATATTTGTTTTAG CTGACACATCTTACGGAAGTTGTTGCGTTGATGAAGTTGCTGCAAGTCAT TACAATGCTGACTTAATAATCCATTTTGGACAAAGCTGCCTATCTAATAC AGGAAAAATTGCTGTTTATTATTCTTTTGGAAAAGAATTGATTGACATTG ATGTGCTTCTGTCAAAATTAGGAGAAAGATTCACACCAGACGACAAAATA TTGGTTCTATACGATGTTCAATATGATTATCCTATTAACTCTAACCTGGA TGTTGTTAAGAAAAACTTTCAGAATGCTTCAATCTCGTGTTTGAATTTGT GCAACTCAAGTGAGATTGCTGATAATGTTACCATCAAATTTGGTCGTGTA TACACCTTGACACACTCTATTGAGGAATACACCTTAGTTTTTATTGGATC AAATGAAAGAACATTATATAACACAATCGTCTCTTATCCTCGAAATACTG TTTACAGTTATGATGTAAAACTTGAAAAACTGCAAAAAGAGGATTTAAAC GTGAACAAGTATTTAATGCGAAGATTTTATTTGATTGAAAAAGCCAAGGA TGCACAGATAGTTGGCATTGTCATGGGTACTCTTGGAGTTGCCAGATACA ATGATATGGTCAACAGGTTGAAATCCATTTTAAAACAATCTGGAAAGAAA TTTTACACCTTTATTATTGGAAAGATAAACCCTGCTAAATTAGCAAATTT CATGGAAATTGATATGTTTGTGCTGGTAGCTTGTCCAGAAAACAGTTTAT TAGATTCGAAAGAGTTTTATAAACCTATCATCACGCCATATGAAATGGAG ATGGCTTGTTTATCTGGACGTTCTTGGTCTGGTGATGTTGTGACTGATTT TCGAGAATTACTTTCGGGATCAAAACGATTTGTTGAACTTGACGGAGAAA ATGACGGAAAAGATAAAAAACCAGAATATTCTCTCATTACTGGGAAACTT CGAAATAATAACACCATGTCAGAGCCGTTATGTACTGATGTTGCAACACG TAATGAATCGAACAGTCTAGTTGCGTCTTCTGCAAGAAATGCAAGTGAAT ATTTAGCATCAAGAACATGGCAGGGACTTCAAATCGACTCTGGTAAAACT GAAGTTAAACTTGCTGTTGAAGGACGATCTGGAATAGCGATGAATTATAA AAACGAAAAAGAGTAGATTTGGCCTTGAAGAAATTGTAAACAATTTTTAT ACTGAAATGAATAATAATGATCGAATAATTATGTATGCTTTTCTGTTTGT TATTGTAGTCTCTTCCACAATCCGTTGCTTCCACATTGTATTTTGATAAT AGAAACCTTTCGGGAAAACCATACTTTGCAATACTTTGAAAGAGCCTTCG ATTTCAACGATAACCTTGCTATTGATGTTTAAAAGAGAAGTTACATCTTG AACATTGCTTAAATATTCTTCGTTTTCGTTTTTCAGCTCAATATAATAAT AATATGAGAAAGGCGCAATCTCAAACCGATCTAGTATCGGACAAAAAGAA GATCGACCATGAAGTTAAACAAGTGCAAAAACAGATCGCCCTTGCTGAGA AAACCAATGCTAATTTATTAAAAGACTTCACCAATATTGTTGTTGACCTC AATCGATTGTTGTCAAGGCAGCACGAGCTATGTTTGAATTTTGAAAGCTT GGCACGGGAAGAGTCGCCAGTTCTTGAGAACAGTATCAGCCAAGTATACA CTTCTCTGAACACACTTCAAATGTCTCTCAAGTTGCACATTGATATTGTA CAAGAAAAAATTGTGAAACGGATAAGTGAAGAAACTAAGAGTTGTCGCGA CGCCAGGCAAAAGCTTGCACAATGCTCAGACGTCAAAAAGCAGCGTACAT CAGCTGCTAAAATCCTTCAGAAATCGAAGAAGTTGAACGAAAAAGAACGT ACCAAACAGACGAACGTGTTATTACAAACCACGAAACAGTTGAACGAGTT AACCACTCAAATGGAGATCTTTGAACGTGACAAAATAGAGAGGATGAAGC GGAATTTGAAAACGTATATTCATAGTTGTTTAGCGTACCATGTAAAAGCT GTGGAGAATTATACCAAAGCCTACCAAGCTGTTTCTAGCATCGATGTGGA AAAACATGTTGAACATTTCACTAATAATTTGTTGTATCCTGAAAAGGAAG AACGTGCAAAATTTGTTCGATGGAATTCCTTTAGCTCTGTAGCCTAACAA ATCATTTGATTCAGTCTTAGGTCTTGGAGCTCTTTATTTTCCCGTTCTCA GTCACTAAGGCGTTTGTTTCTAAATATTTAAGGGGGGGTTAGAATATCGT AGGATAAATTGAGCGTGTTCGGGAATACATGTTATTTTAAGAGGTATGAA CCCCCTAGGTTTATTTTATCCTCCTTATATACCCATCCCCCTTCCTTAGT GAAATCCCATCCCCCTTTTTTTACAGAAAATCTGTTTTGAAGAAAACTTG CTCTAAGCTCCTAAAGTATGATCAAAGAGTACAAAATGTAAACAGTCACG TGTGCAACAATTTCACAATATAACTAGGGTGTTTATTAACATGATTTTGT GTTTTGGTGGTATATGTTTTTACTTCGAAACAGACTGTAACCATTTGTAT ATGATTAAATTGATAAAATTTCTAACCCACCTTTCTTATTTGATCCCCCC AGTTTTTTGACAAATCTTGATACCCCCTATCCAAAAAAAATACATAAATT GGCACCCTCTCTATTTAAAAGGGGTTGCAAACTATGAGGAGGCTTATATC ATGAGCAAAATACTAAGAAACCTTCAAATCAACTTGGAAAACATTAGAAG TCTTTTGTGAAATTCAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004132TCONS_00004132Clytia hemisphaericatranscript
TCONS_00004131TCONS_00004131Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004131-proteinTCONS_00004131-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000039supercontigsc0000039:467181..471897 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
DPH2diphthamide biosynthesis protein 2 isoform a Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
23.79 23.63 13 10.67 5.44 3.85 5.32 5.88 4.1 3.86 3.62 4.24 4.21 5.36 5.64 6.33 4.95 4.75 1.59 1.57 8.51 8.66 29.5 23.81 5.33 7.49 3.37 3.56 14.65 19.42