XLOC_002191 (gene) - C. hemisphaerica

Overview
NameXLOC_002191
Unique NameXLOC_002191
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000038:594329..598975+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002191 ID=XLOC_002191|Name=XLOC_002191|organism=Clytia hemisphaerica|type=gene|length=4647bp|location=Sequence derived from alignment at sc0000038:594329..598975+ (Clytia hemisphaerica)
NAAAAAaagcaagaaagaaaaaattaaaaacagtttAAGATGGATTCAGC TGCGCTGGAAAGATATTTTGAAGAAgcaatgattttcttttcaaggACGG ACGTGGTTATAAGTGTTTTCACCACGTTGATTGTGTCATTTCTGACGTTG CGTTACTTGTCCAGTAAAGAGGGGATCGAAATCCAAGAACTGGAATATAA AATACGAGTAAGAAANGCGTTACTTGTCCAGTAAAGAGGGGATCGAAATC CAAGAACTAGAATATAAAATACGAGTAAGAAAGGTAAGTGCAGTATCGCT ATTCCTTTAAATGATCATTGCACTGAGATGCATACAGTCATGTAAAGGTC ACACCCAGCCGGTGGCGTACCCAGATCCACATGTACAGTAAACGcacgct tattcgaacttctactatttgaatctttctagaattcgaactaattctca gtaCTCATCGAGGAAAAACCCTCTTAAACACTTTCTATAGTTCGAATATC TCtgtgatttgaaaaaataaggCTCTCGAGtttgaattagcgagagttaa cCGTAAAAAGATTGCACTGAAATGCATACAATCAGGAGAACGTCACACCC GGCCGATGGCGGAGCCAGAACCACACATATAAATTTTTCAACGGGTGCCA ACAGCGGCTTCACCCGTTTGCAGATTAGCTGCTCAGAATCAAAGATTCtt tatttgctaattttacTGGAACTTTGAGGTTGGATGAATGAATGcagttt ttattaaaatttcgatgagattgacaatttattttttgaatgaaCATTAA TCAGCAGTAACCCAGGATTGatttattatatattattgAGAATCCGTTGA CCCAATTGTATACAAAACCAGCAATCATTTGGTACTATTTTTGCTATAGG TTCACCAGTTAACTCCTATCTCGTCATATGTGGAAGAAGTTCATTTGACT gatttaaagaaagaaaattcgtGCTGAGGATAAGTTTAAATAAGGCTCCC TTAAAAtaccttttttccaattttcaggATGGTGAaactgaagaaaatga agataaagACCAAGAAAATAAAGAGAAAGAGGAAGGTAAAACGAACCCCT GTCTCGTATAATATGAACTCTGTTTCAAACACCCATGACTGTACTAAACG AACCCCGTTGGAAAACCTCTGTTTCACCATTATTGAAAATTAACACCCAT CATTATACTAACAAACAATGCCTGTCTCAACCACCCCTGTCTTCAAAGAA CCCTGTTTCCAATAACCCTGTCTCCAATAACCCTGTCTCAAATGAGTCCT TCTCAAGCAAACCCTGTTCTAGATACCCTTAAAACGGCCCTTTCTCAAAC GGTTTGGATAGAAATGATGAAATTCAGACGATACCTAAAAAAAGATATGA ACAAAGTGTTATCCTTACCAATAAAGTATAAGCCCGaggggctagaatcg aatctccttggtaagatttgaagccaacaaatcctaccaaagttgcgcgg cctagcgTGGCctgcctggtttttacacaaatcgcagattgaaatgaaaa tttactgctaaatttcgaaaaaaagtaacactcgaaaacaaaagaattgc tagattcaaaactgtcgtcaaaaatacggcgcatataaggcttcactttt tcttgcctgagaaaggttagagattcgattctagcccttcgggcttatac ttcatcgATCCTTACCCCACGAAGACATCAAAACAGTATGATTTTGGTTC AACAACATTAAAGCTTGTTAACAAGGAGTTAACGTGATAattattcttta ttttactTGTAAAATTTCGAGCAATAACGATAAACAGAGGAGATcaaacg aaattttgaaaagatgtttgtttattttgttattttgaccctttgagaga ctatttTTCCGATGTTAAACTCAAAACTACCAGATTTTATGACCCTTTGT CGATTTTTGATACTTcgtaattttgggaccctttcagagactcaTTTACT TtcagagactttcgagggtttaaaaaagggacccttatatATACCTGGCA CCCATTTTGCCCAAGTATCCCCCGGAGGAGTTAACGGTTATTCTTTTTTG TTCTCCTGCAAAGGCTTAGGGGATAATGATGACGATATAGAGGAGATCAA AAGAAATTCGGATTGTGAAGAagataaagaagaagaagacgTGGAAGAAT TGAAAAGACGCGTCAAATTGTTGGATTCTGATGACGTCGAAATGATCAAA AAAGGTACCTTATTATTAACTAATCAAGTATTGCACCCTAGTGCaatggt agagcatccagcaTAGCCCCCGGGGTAGGGGGCTCACTTTTTTGCCGAAA AAggcttttttgaaaactttcagttattttttcatgaattcttttcaaat tgaCTCTAAAAAGGTCCTAAAAAGGTCCTAAAAAAGCGCTTTCCCCTTTC AACccactcaaaattcaaaatttacccAACCGGTGGGCAACATCAATTTA CTCCAATATTTAGCCCCCTCACTTCAGCCCTCAAGCTTGGGGCCCTGGCa ttcggctacggtgcgcaaggaggtcgtgggttcaatccccagccgggtca taatCAAAGACTTTGTACTTATTACAAAAATCATACTTGATGCCTCTCAA CTTGATGCTCAGTAATTAAGAGAAAGATCAAGAGTAACATGGAGAATAAG TGGCGCCCTCTCCTACCTTCGGGTAAATAGCTATCGAAATAGGAGCCTTC TGGTTGCCtctgactgcggtcgcagacttacttactaatCAAGTATTTAA ACGCGGGAAAAATGAGTGCTGCAATTCATTGACGCGAAAAACAGAGTTTT CGAGAATTGCCttggctaaaattttgttaCGGGAGTGTAACCAATTTGCG TTAATAACTTTTGTAGTAAGGTACCAAAGTGTAAAGATCTAGTTACTTCA TTTTAGGCGGAAGGCTTTTTACCTTGTTTTCCCtcaatttttgacgattt tAGCCCTTCCGTTCCCAATCGTTTCATTCACTGATAAATAAACTCGCTAG TCAAGACATGCGGTATTCCTGAAATGCTTCTGTCCGCGTTATTGATATCC TTTATATTGAGCGATACTCCTtttgaaaaaggtattttttggTTTTCCTT TGAGAAGATTCTGTCGTGAAAGAAGTTCTATTGCTGGCAGACTGAGAAGA AGACGGTTTTTCGATTGCTTTCGATTCTTCTAACCTTGGCAATCTATGTA ACACCAAATCTCAACTCTAACTCATTTGACCAATTTCAGGTGCTCACCTC GACACGAAAGACCCGGCCGCAGTGAAACATTACGTTCAAGAAATGCGCTC CATGAGCTACAAAGGAAAACAACTCGATGATACTGAAAAAGAACGAGAAG AAGAGTAAGTTATTAGCAATGCTGCTTTTTGCCTCGCTGCATAGCAAACT AATCGATGGGAGCAGCTATATTCAGTTTGCTAGGTAACAGGTACGACAAA AGTGGAGGAGGAAAAAAAGGTTCTATTATATTCTATTTCACCCATTGCAA CTGACATAATATGATATCGTAGTTTGCACACACCATCTCTGGTATGTTTT GGTATAGGGGGTGCGCAACGTGTAGAAAATTTCCGTTCGAGAGTCACACC CATATTGTGTTTTTgtcttttagaaactttgatgTAAGTTTTAGAGGTCT TTTAATTTCATTAGGTtcgaattaaaaatttgaatggctagagGGTAACA CAATCATTCAATCGTaacctttttaagaaaattgaaacaggttaccACAG GTtactctcggacgggaattgtAAATACACGAttagcatcccctatatca aaacatatcagaggagATGCCTGCAGCCTAAAGAGAGCGCTCAATTTTCC CTTAAGAGTGCCGCGATCCATACCGCTCTGTTTTTAATTGTATCCCAGCC GAAAAAAAGTCCAGATTGGTATTAGTTTCAAAATAGTGAGAGCTACAATg ttcttcgtgtgcacagacttGTTAGAAGCAAACTAACTTATTGAAATGTT CAATTAGGtctataagatcacaaaaacgagtggtaagaacattttttgac aattttgatgGTCCCCATgcgacgtcatcacttttgtgAGGCTTGAAAAT GAAcgtgaaaatcaatatttgagaagctataaaggaaaatagctcacaat taaaaaatcatcgaaatcgaaaaatttttgtttcatttgaaaGAGGAGCG GCTagggaacaaaaaatatcaCTACGGAAAACCTTGAATTTCTCCTGGAT GTTTTTAGAACATACTGTGGTGTCTCTCACTAAAAGGTTTGTCTATATAC TGTagttctaaatatttttttccatatTCTAATTCTAGAGTAAGACAACG TCAACTGGCGCAAATCTTTTCACTGATGAACCAACAAAAGGAGAAGTTTG GAGAGACCAGCATTGATGACCTCAAACAACAGATGAATATGTATCAATAA TGGATAGTGGTGCAAGATATTTATTTGACTCGTTTAGTCGTAGTTGTAGA CTATTTTCACGGTCAAAACTAATGacgggtaatcaggaccactactctcg ggtacctaatagccggggggtttggaataagcgcggggggggggggg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003912TCONS_00003912Clytia hemisphaericatranscript
TCONS_00003913TCONS_00003913Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003912-proteinTCONS_00003912-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000038supercontigsc0000038:594329..598975 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
52.05 55.27 153.67 150.6 10.52 8.14 15.51 15.46 14.64 15.29 12.47 11.37 10.89 9.17 9.62 11.86 13.77 20.6 12.81 15.12 16.85 17.04 26.89 24.33 98.59 92.21 22.23 24.19 23.8 25.39