XLOC_002164 (gene) - C. hemisphaerica

Overview
NameXLOC_002164
Unique NameXLOC_002164
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000031:840066..845995-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002164 ID=XLOC_002164|Name=XLOC_002164|organism=Clytia hemisphaerica|type=gene|length=5930bp|location=Sequence derived from alignment at sc0000031:840066..845995- (Clytia hemisphaerica)
CATTTGTAGAACACAGTCATTTCATTTTATTTCCTAACCTTACCAAGGTA ATCTAAAAATTCAGGTCTTTGGTTGTATTTGGATTTTATCTTAACTAGGA TGTTGATCGCTATTTTATTTTTTTGCTACTTACTTTGTATCCTTCTCAGG ATTTGGCGTTTTAGGGGAGGTTACCATAACGTATCCTTATTTTAAAATAA TCCCTCGGACTGGCAGTCAATAAACCTTTTGTTTTTAAGGAATGCTTTAT TACAAGAGTTGTTCTCTTTCATTCATTCCTTTTCAAGTCTTATCTTCTCC TAGTTTCTTATCTTTATCAACCCAAGACTCCTTAGGGTTTCGATCAGTTT GCAACTTTTGTTGTTTTTCTATTAATTTGCCACAGTCTCTAGAAAACGAT TTAGATTTTCAACCTTCTATCTTATCTGTAACACCTTAATTTTCTTGAAG TGCAAAAATCTAAAAATGTACTATGTATCCTGGTTCGAATTCCAGCACTA TCCATAATCCACCAATGGGTTATAACACTCGCCCTTCTGAATACGATGAC CAGATATTTGAAGAGCACTCAAGATATCAGGTTCAATCTTCGAGAACAAA CCCTACAAATAATGTCAATACTGGACCTCATCAATCATATTATGATCACT TATACCCAACCACAAATCCCATGAGGCGGACTGTTAGTGAATATGATCAT TTTTCGTCATATAATCATCATTCACAACAACAACAACAACAACAACAACT TCAATCATCTTTATCGTATGATTCTTATGTTGCTGAGCAACTTTACAAAC AACAGAACTGTATCAAATATTTAAACCAAGCTATAAAATCCTCAAAGGAA TACTTAGCAGAAATTGAGCATCAAATGCTTATTAAGGAAGATGAACTTTC ACAGTTGAATCGAATTCAAAAGAATCCATCAGAACAGGATATTGTGGATA TAAAAACTGAAATAAAAAACCTTAGGTACTCCGTCCAAAATCTTTTTTGT GATGAGATGGGTGGACCAGAACCACAGCCAACAACACCAACAAGTCCTAC AAACCAAAGGCTACCGTCATCTTCCGCCCAATACAGTACAGCAAGGACAT ATGATAATTATGGAAATTTTACTGGTGCGAGATTCCAATCAATACCTTTG GAAAGCCCTACCTCAAGACTATTGAGGAATCCTATCGATGATTCTCTTGT TTCTTCACATCAGCAATAAGTTTGTTTTTCATTGTTCGGTTATGTTTATG ATAATTTTTGGTTTTGGTGGTCAATTTTGAATTACCTTAAGTGAAGAAAT TTTTGCGGAATTTAATTTCGCAGTTTTTTGACAAACCCACAAAATTAAAT TCTGTGAAACATAAATTTTTTCAAGATTTGAAAAAGCATCTTTAAAATTG GTCATTTTAGGCCAAAATAGGCCATATTATGAACAAAAAATTCTCTCAAC TTCAATATTGAATTCTGTGAAACTTCCAAATTTTGAGCTGTGAACTGCAA GATTAAATTCCGCGGAAAATTTCTTCCCTTAAGGTATTATTTAAGTTTTG GTGAATGTTTTATGATGAGGTCTGAATAAGACAAAGCTCAAATTTCTTTT GTGGGATCATTTATTTATTGCAGAACCAGAAATATGCCAACATTAAAGTC TCAACCTGAATTTACCGTTTCACACTTAAAATTTTGGGATGAATATTTTC CATAGGATCATTTTGATTGGTATAAGGTATAATTTTAGAGTAGTTTTTAC TTTGTAGATTATTCGCACTTTCATACTTATACTTATAATCTGTTATAATT AACATTTTAGAATTGCTTCAATGAAGCTGTTATTAAAAGAATTGGCATTG CTTACATTTTAACAATGCTCACTCATGTGAATATACTTTATAAATTTAAA TTGAATATATTTTATACCTTATTTTTAGATTAACATTTTTTATTTCGTAA AACTTTTGTTTATTTAGTGTCGTGATTTTTTATTATTTTCATTTTCTTTT ATTCAAATACATTGTAGATTTTGTTTTGTTTTTCTTTGCCTTTTCTTCGC CTTCTTATCCTGGTTTTGTTGCCATTTTTGATTTTCTAAGATTTACAGTA TTTATTTTACAGTATTTTCTCAAATAACTTTCTTTACATATTCGTTTATT TATTTACAGATGAAATAATAAGAAGTACGAAAGAATAATAACAACAAAGT CTAAACAATGGCTGATGCTGAGTATGACCAGGCAAGGATGCATGGGAATC GTTCTCCAACAAGACAACACGTGTATGAGAATGTACACAGTTTTCAACGC CCACTTCCGCCAACAATACCAAACAGGACAGGTTCACGAGTTGATAACAT TTCATCTCCAGAACATACTTCTTATTTCACAAACATTCAACAACAACAAC TTAATCAATCACACGATGGGCTTCGTACACGTCATGATGGCTGGTCTGAG CAACCACCTTCCTATCAAGAAGTAGTTCCGTCACCTAACCAACGTAAATC GTTAGATGAAAGTTTGAATCGTCATGTACAAGCTAACGTCAATAATACTA CTAGTAATGCTTCAAATTTTGTACGCCAACACAGGCGTGGACGTAGTGAC GAGGTAGCACGTTGTTTTGAAGGAACACCTAGTGTTCCACGGACTTCTCG ATTTGGCTCACCACCATTAATGCGAGCTAACCATATGATGCATTCACAAA GCACTACGTCTTTGGATCAACAACACCCACACCACCACACGCACTCATTA CACCATAGTGCATCCATTGATAATGCAGCTGTACAATCGATACTAAATGA AAAACTTTACCAACAGAATACTGTTTATGTTAACTTAACAACTGGGATTA CTTTATCCCAACGAAAATTGAAAGAACTAGAAAATGAAGTAGAGCAACGT GAAAAAGAGCTCAATAAATTGTTATCAGTCCAAATGAACCCCACTGAGAA AGATTATAGACATTTGAAAGGAGAGGTCGCCATTTTACACCAAGAAATTG CGCAAATGTATAATGAATGTGATAAAATGAACATTTCAATTGATCCAACA AATAGTCATTTCGCTCCACCACAACGCCAGTATCCGCAAATGCCGCCTCA ACCACCTGTACCCAACATTCACACACCATCTCCGCGCAACAATATGTCTG GCAATGTGTTATTTCCAAATTCACAATTAACAGGCAACCATACGTTACCA ACGAATTACCATAAAACCATCAGCGACCCATCACCAGACCATTCAGGGTC TTTTCAACAAACACCTGAACTTTTTCGAAGTCAATCAACAATACCAAGGC GGCCACCGCCCTCTTCACCTAATCCACGCCCTGTGACGTTGATTCAATCG CCTACGCCAATTTCTCATCCGTTGGGAAGTCCAACCAAAACTTCTGCTCA GGAAGAAGTTAATGAAAATGAACATTGGCTTTGCCCAACATGTACTTTTA AAAATTTGTTAGTTCCTGAATGTGAAGTGTGTTGCACTCGTAGGCCACCT GTGGTAGGATTAAATGACTCTTTGACTGGTGGTAGTCAAGGTGCTATGCC AATGCAAAGACTATGAATGAAGTATTTTTTATCCAATTTGAAAAAAAGGA GACATATGAATTTTGTTTTTGAAACACTCCACTTTTAAAAGGATTTGTTA TTTAAAACTGAAAAATGAGATACTGTGAGTTCTAATTGATTGATTCCTGG CACATTTTTATAAGCAAAATGTTAAAGAATGGTGTTTCTTTAGTCCTATT AAATTCCAATGTTGATTTTTTGCTCGAGTAATGCTTATAAAGATTGTGTC CAGTTATCAATATACTTTTTCTTCAAATACATCAACTTTTGCTGTACAAA AAGGGCTTTTTTCTAAACTTTCCCATTGTCATATGACGTCAAATGTCATT ACATACACAATCCTAAGAGAATCAAACATTTTGACGTCATTCAACTCGAA CCCAAACCCCTAGATGATGCTAGGGTCGATAGGTGTTTAGCCTGAGGAGT ATTTTCATTTTGGAGCTTCAAAATAGGTTCAAGGTTGCACCACCAACAGA TTCCCATAAATATACAATTTTTTGAAGAAATTAAATTTTTCGACTTTTCA TTTCATGCAGTCTAGGTTCATTAAGTCTTTTTAAAAGATTTTTGATAAAG CTTCAATATCAATGCTTCTGTGTCTAAAATTTTAAGTCTTGATCAAAAGC AAATAGAATTTATTAATCACAATCAAACTGAGGAGACGCTTGTTGGTAGT GCATACCTCAATAAAGTTTTTCTCATGAAATGAAACCCAAATTCTAATGG TTATGTATTTTTAGCAGTATTCGAACAATCTGCATTGAAAGCAAGAGACT GTTTTAATAGAATTTTGAATTAGATTGCTATTTCTGCTCTTTGAAAAAAT CTAAGAACCATTAACTTTTTCAGATTAGATCAAAATTATCATCCAGTCAA ACACAAAAATCAGCAAAACAACTCTGATATGATACTTTCATTTCCAATTG TTGTTATCTTTTAATTTGATAACAATCCACTTATAAATATATTTTCAACA AGCACAAGAAATCAATCTAATTCGAATTCAACTAATACAGTCTTTTTGTT TCCACTACAGATTAGTTTGAGAGAGAATTAAGTTTAAATATTCTAGCGGT CATTTTAATATTTTTCTGAGGATACATAGAAGTGTTTTTCAAAAATTATT TACATTTTGAAGACATTTTAATATTTTTATATATACCTCAAAATGTTATA AGGAAAACCTTTTTTTCGAGCTTGACCTCTAGTTTTTATTAAAATTTATC AAACTTCTGAGCCGAATATATATCTCTGATACCGGTAATACACATACTAA AGTCTGTTTTCAAAAGTATGTGGGCACTTCACTTTTTAAAAGATTCTTCC AGTGTCCATCTAGATGATATATTAAAAAGTCGTACACCGTTGAAAAGATA TTTCTGAGGAAAATAATGCTAAAGATTAAAGAAAACTTGAAAATTTGAGG AATGAATATAAAAAAAGAAGGTTGTTCTTCTTCGTTGGAAAATTATGATA TGACACTTCAGAATGTCTGTTCCTTGCTTATTTCAAATCTATGTACAGAT TTTTCAGCCCAGTGCAGTAGGATTTAAACAGCCAAAAAACTTACCTCGAA AGGCTTTTATCCGAGAAATCTCGATGCAAGGTTAAGTGTCGTCTCATGAA TTTTCTAACCAGTATGAAAAATCTTCATTTTTCTATTTTTTCAAAAATCT TTGATAGAAGAAAAATATCTTTTCAACTGTACACAATTTTTTTAATATAG CATAGGGGCGTCCAGAAATTATTCAAAAAGCAAAGTATCCACAACCTTTT GAGACAGACTTTTTAGAAAATATTCTACTTTTTTGGTGAGATAATGGCTC TTTGCAACATTTTTGAAGAAAAACAATTTTGCTATTTTAGCCTCTTGTAA ATATAATCTAATAACAATCTCTCGTGCGCTATCTTTTCAAAATTTCCGAT CGTAGTTTCGATGTTCACAAAATTTGCTGCCAAACCTTTATACTCACAAC CTTTAATGATACAGAGTTAACGTAGTCGTTGTGGTTATAAATAAGGAGCC AGGAATATCTCCATAAATAAGAGCTAATTCCTGGACAAGTTTAGCTTTGC TTCTATAAACAGCGAAAGGGTTATGTTGTTATTCGGCTGGGAAGATTTTC AGAGCGGAAATTGACTTTCTGAAGACAAATTTTGGATGAAAAATTGAAAG TCAAACATCAGATTCATTATATTTCTTATCTTTGAACTGGGCAAGGATCA TAATTTTAGCCCGGGTTTTTCAAATGAAATTTGTGTTCTGAAAACATGAG AATTTAGGAATAAAAATAAAGTGTTCTTCTTTATTCCTTTGTGTATAAAT TGATATTTTGAATTACTTTTCTAAATAAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003855TCONS_00003855Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003855-proteinTCONS_00003855-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000031supercontigsc0000031:840066..845995 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
19.83 20.07 15.57 12.53 9.3 7.42 7.14 7.54 4.12 5.28 3.83 3.37 4.43 4.99 4.18 4.5 5.24 4.95 3.96 4.74 5.24 5.68 15.97 15.02 6.63 7.53 5.78 5.02 10.45 11.3