XLOC_002101 (gene) - C. hemisphaerica

Overview
NameXLOC_002101
Unique NameXLOC_002101
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000031:853285..856776+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002101 ID=XLOC_002101|Name=XLOC_002101|organism=Clytia hemisphaerica|type=gene|length=3492bp|location=Sequence derived from alignment at sc0000031:853285..856776+ (Clytia hemisphaerica)
ccagcTAAGGTTGAAAAGCGGATCAGTTTGTTCTATTTGGCAAATGACGT
TATTCAAAATGGACGCAAGAAAGCAAAAGATTTGGTCACTGCATTTGGTA
AAGCTTTTCTGGATGTCATACATCTTTACaggtttgttttcaaatttata
atttACATACCTTGCCAGGGTAGTTCATTATCTTGAATCAGAAACCCATT
CTTCCTGGCTAGTATCCCTGCCACTTCATGATTGTTCAGCATGGTGTCCT
CCAGGTTTTCATGACCCCCATCTGTAGGCTAAAACCCCCATTTGGTCTTC
CCCCCACCAACCCTTTGTCCAAGGTTTCAAtcgaaagaatatttttgtga
cCAACCGATTCGCTATATTTTGCATAATAACTTAACAAAATAACGATTTC
CTGCAATGAAAGCTCAAATGCTGGAAACATAGATACATTTAATTAtctat
ttgaaatattataCCTAATCTTTGCACTTTCTACCCCCACTTCCCATAAA
ATTTCGTGAATATCCCCCATTTGGATTAGTCCTCCCATCAAGGTGAAAAT
ATTCACTTTCCCCTCCAGAGCAAAAGTTGATTCCCCCCATCTTTCTGTGA
TCCCATGTTCAGTTCACAAACATCATAAGAGTACTTTTACTTGCtataaa
attaaattgaaatgtaAAACCTACAATCTGATCAATCTGACTCAACTGTT
TTACTATTTTTCATTGTTCTTCATTGTTTCTATAGGGAAAGTAAAAACAA
GGGTCAAGTTGAAAGAGTGCTTAGCATCTGGGTTGAGCGTAATGTGTACG
AAGCTGGTTACGTGAACAAGCTCAAAGAACTACTCAACAATGGAGGTAAA
GTTTAAATAACATGTAATGCAATAAGATAATTGCAAAACAAGGTTACGTT
CAAACTGATTAAGGGTCGCAAGCGCTTGCAATTTTTCATTGCAATTTGTT
CATTATCAAGCGTTTTGGTTTAGGAATTGCAGGCTTTTTTGGTGGGTACA
CAAAATTACCCAATCAGTGTACCCTTAGCGTTACAATGACGTTATTTTCA
GTGTTTAACCATATTCTTACTATGCTTTTAGGGGTGGTTCAGAACCTAGG
GGATGGGGGCTTTCCATGTACCAACCCTTAACTTTGGATCTagttggtct
ttttggatgaaatttggcacacaaggtCCTTAATATGTAAGGTAATATTT
Taaggtaaaaaatttttttgatggcgtcactcatcatgcccaaagtgagc
aaaaacgaaatttcctttgttcttctAAACAGCTATTGTATTTTAACAAC
TACTGTATTATCAATTGATAtcgaaatcattttattttggtaGTGGCACC
ACAACCTACCTCACCTGTCAAAACATCTCCATTGAAAGTGCAACAAAAGA
GAAGTTCTGTCTCATCTAATTCAAATGTAGTGCAAAGTAGCACAAAGAAA
AGTGTTCCTGCTAATTTCAAGGTAACtgtcaattttattttgtgTGATCT
TgtatgattttatgattttagttAAAGTGTTATCCAAAGaataaatttct
tcaaaagcgaaatttaagaaaaatatgttCCTCTGTAATCTTTCAATGTT
TTTTCTCTCTAAGCTCAGTTACAATTCGGTTTCAAAATTTGGCAAACATC
AATCTCAATAGATCTGCTTGTTTCAAATATATTCTTGTTCGATTGCAAAC
ACTTTCAAACTAGCCTTTTGATGTCAATGCTCGTATGTTCCGTGCTCATG
TTTCTATTCTATCCGAAACTAAATGAAGCCTATATGGTTATAAGTNGCTC
ATGTTCCTATTCTCTCCGAAACTAAATGAAGCCTATATTGTTATAAGGGA
CGTAAGTGAATTTTACCAATTGAATGGCTTCTTTTGAAAGGGAACCGTAG
CATTTGATCATGGtcttaatttttggaacaatttgtttgttttaggtATC
AACTCTACTGATGTCCATAAAGAAGTCGGTCAGTCTTGACAGTGATGCAG
AAAGAAAGTCCAAGAAATTGGAAGGGATGAGAATAGACGCCACCAGTGTA
GATTCTATTAAGAACGTTAAAGGTGAGCCAAACTGGAAAACTAATGTAAT
AGCTTTGATCTCAAGTCACTCTCATTTAATATAAAATTCACaataacaaa
aaatgaaatagaaatggTCTCCATAAAGCAGCTTGAACCTGTGCGAATAT
CTTCAGTCCCATTTTGCCAGTTTTTGACCTCGATTGGATGAATGCACTTC
TCCTTTGATATGAGGCAATAAATTTTCGAAACAACTTTCTTGGTCTTGCA
TGAGAGAGGAGAtcattgttttcaattaaagcTAGTATCTATTCATGAGT
CTTTTGCTTATTCTGCAAAAATATTCCACAGCTCCATTGAAAACGCAgac
aattcattccaattcttaTTTGACACTTTGCAGTCAAAACATTGTAAACT
CTCTGatcattaaaatgtttattaaagtgaagacattgcagtgttgAATC
GAACAATTAAGTTACGTCACGCGCTATCTTTTGTTTTCATGATTGGTTGA
ATAACTGCAATCTCTATGAAGCTCAGCGTTTTTGaagcagcgattcagac
ctcggaaaatataatgtcaatctggctttaaCTTTAATTTGGTGTTTAGA
TCGTTCAAGTGTCGGACATTTCCATAAAGAGTTTGATGATTCGAAAATCA
TGCTTGAAGATTACATCAACACATTACGTCACAATGTCCAAGAGAAACAA
AAGATCTTACCTTTGCTGAACAGCAGTGAAGCATTTTATGCTCTGGCTCA
AGATGAAGCCAAAGTCATCGTCAATGTAAGATTCTACTGATTGTCTCAGA
TTTTTTATACAAGACGGAAAAGTTTTCATATCATCCCGATCTCTTTAACT
AGCCAACCCTTGCCCTTGTTTATCAAAGATTATGAAAAAGCTCTATTGTC
TTTACCATTCACATGgttgctttcattttcattgctttCAATCATTCCTT
TGTTTTCCTGATAGTGGTGTAGTTGTATTTTGAAATGATGATCTTTCAAA
AGTGCTGGTTTCATTTACAACCAAATCATCCAGTTGATTTCAGCTAGACG
GATAGTATTGGCACTACTTGATCAAGATCACTTGTATTTTCTTTGGCACA
TAAGTTCAAGATGGGGTAACCCTATGTCAGTgttgtgacctttttcaggT
TGAGGTTGGAGGGGTGATCCCGCTATTCTTTGAGAGTTTAAGATACATCT
TCATATGGTTCAAGATTGTGCATTACGTTGATGTACAAAAAATTCACTGT
TATTTCATGTCATTTCTCCATCCAGGCTTACAAAACGTTTGGCAATCGTT
TGAATTCGATGAAAAGAAAACTCGATGTCAAAATCTCAAAGCTAGAAGAT
GACGCCAGTCGAACACCTGAAGAACAGACTGATTCTCGTGGTCACAAAAT
GAGATCTTCAAGCGGCGGAAGTATTCAGGATATGGATTTAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003767TCONS_00003767Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003767-proteinTCONS_00003767-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000031supercontigsc0000031:853285..856776 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.26	9.45	5.8	6.24	52.32	40.87	22.95	27.25	9.87	15.64	11.64	8.51	6.07	5.91	8.15	13.25	14.63	11.48	3.23	2.76	7.95	8.45	24.08	23.66	21.46	19.97	3.32	2.55	24.06	34.13