XLOC_002086 (gene) - C. hemisphaerica

Overview
NameXLOC_002086
Unique NameXLOC_002086
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000031:342608..346536+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002086 ID=XLOC_002086|Name=XLOC_002086|organism=Clytia hemisphaerica|type=gene|length=3929bp|location=Sequence derived from alignment at sc0000031:342608..346536+ (Clytia hemisphaerica)
TTAGCTCCTGATCTACCAAATGTCGTTCTTTCATCAAATGTAggttattt ggaaaattttggttATCAGTTGCACTTGCTCTACCGGGTGACCaatcaaa accatttttaaactttgtttAAGAAGTTTTTTGTGAATCACCtttttata caccttttcgaccgtagccgccaattgccgcgcgggcattttttgtccgt tttaccaccctaaaaccgtcccagcctttttttcgcacctaaagacaata ggaattatattatgctgatataagcttCTTTCTGAACAATCTTGCTCTAC ATACGTGTCAACCCattgtgaaaaagcttgtaaattacaAGTGAtgtaag caaacaatatcactttcatttaaaaaaaaacctttagaCAAAGAATGCAG TGAGATTACgtaatattatttttctttacacTTTAGAGCACCTCAAAAGC CTCCTGTTATGATCCTTGTCCAACCTACTGATCTCGTTGGACGGGCTCCA CAAGCCATCATCGCGCATTCCGCACCTACCTCTATCCAACCTCGCATCTC CCCACCGAAAGCCGTATCTCCCATAGGGGTAAACAACTGTTCAACCTCGA AAAAATATTCTTCGTCCACCTCCCCCTCGCCAGCATCAGCAACCACCAAG AGGGAGCTAGCATCCTCCCCTCCAGCAGGCATCACAAATCACAGTGCTCC TACCCCTTGTATGGTAGCAGGTGGTCTTGGAAGTGGTGTTTTCCTACATT TCGACAAAAAATTATCCGATTGTGTCAAACAGTATCCTTGTCTGTATGAC AGTAAGACTGTTGGGTATAAAGATAAAAAGACAGCAATGAAAGCTTGGGA ACTGGTTGCCAAAGAAGTCGAAGTCGAGAATGGTGAGCACACATTGTTTC TATAACAGCCTCAAAGTGAAATTTAGTCAAAACCTGAAAGTAAATTAAGC TGGTGGCACTGACCTTGAcagccgacggggacgtgctgctgaagtttaaa aaataaacCCTATACACATCTTAAAAATTTAGTACATTTGGGAcgctgtc agatatcttcagagcttaaaaaagggaccctgaccagcggcacgtctcTT TAACCGATTTTGTCAAAGCGTCCCCTCGGTCTGAGCCTCAGacttgaaag tttcaaaaaatcgattgtaagtttcactttcactttcatttttaggtgAG CACGCACAGAAATTGTATTTCAATCTGAAAAAGCGATTCCACAAACGCAG AAATTTTCTCAAACGTCTACAAAGGTCTGGTACCAATAATCACATATTGC TAAAAAAAGCNAAGATAAAAAGACAGCAATGAAAGCTTGGGAACTGGTTG CCAAAGAAGTCGAAGTCGAGAATGGTGAGCACACATTGTTTCTATAACAG CCTCAAAGTGAAATTTAGTCAAAACCTGAAAGCAAATTAAGCCGGTGGCA CTGACCTTGAcagccgacggggacgtgctgctgaagtttaaaaaataaac CCTATACACATCTTAAAaatttagtaaatttgggacgctgtcagatatct tcagagcttaaaaaagggaccctgaccagcggcacgtctcTTTAACCAAT TTTGTCAAAGTGTCCCCTCGGTCTGAGCCTCAGacttgaaagtttcaaaa aatcgattgtaagtttcactttcactttcatttttaggtgAGCACGCACA GAAATTGTATTTCAATCTGAAAAAGCGATTCCACAAACGCAGAAATTTTC TCAAACGTCTACAAAGGTCTGGTACCAATAATCACATATTGCTAAAAAAA GCGCGAAGTGACGTCAGCGTATATGCGTTTCTTGATTGGTTGATTCCCTT CACACAAGTCAGACAGCCACGTGTACCTATCAAGCCTGAAGAGGCGAACT TACTAGAGGCTAAATATCTAGCTTCTGTTGAAAGTGAAGAATTTTTAGAT GAAAGACCATCTTTTGTTGATCTACATTACAATAATTCAGCTTCTAGTGA GAGTTTTGAGCATGAAGGTGGCTTATATGTTAAACAGGAAGCCCCGGATG ATGAGGAAGCAATGTATCTTGGAGATGAAGAGATCATTACAGTTCGTCCA TCAAGTCCAATGAATTCAGCACCAACTCCTCCGTCAAGTTTTGGTAACCA TGGTAATCATAAACAGGAGGAAGATCTACACTCCGATGAGAACCATAATG TCCCTGAGAAGAGAATTTTGAAAACATCCATTGAAAACACTATTACAGCC AACAACCTAAATCACGATGAGTTCACCAGAAAACGTACCAGAGATTCCAG TTTCACAGATCCTGCTCCATCCTTGACTACAACTCACCCAGAGAATTTAA CCAATAGTCACCACAGACACACACAAGAGCATATTAATAGCAAAAGATCA AAATTTACTCTAGAAAATCATGCAGCCGATTCGAAATATTCCGACTTAGA AAATGAAGATAATCTTTTTGGTCAAATGGTTGGAGCAGAACTTAAAGGGT TGCCTTACAAAGAAAGATGTATtgctaaattgaaaattcaaaacatctta TTTGATATGCAAATGACTGCATTGAATAAAAGGAACGGTAAATCAGACAG AAGAGAAAGTCACACTATTTGAATTGGAGAAGAAATGCGGAGAAATCttg aattattgaaagtttaaaaagaagGCCTCCTATCCAGTGGTATGAGCGAT TGCGTGATTGGAATCTTTTCAGGCCGTGATGGAGTGATCAATGAAGTAAG TCCGGAGAGCTATAAGCGAATCttgacctttctcaagcaagaaaaagtga agccttcaAATATGCGTGGATTGAATCAGCGATTTCATCGTTTTCGGGtg gtatttttttcgaaatttagcggtaaattttagttttaatctggcatttg tgtaaaaactaggcGGTTTCGCGGGTCACGGGTCTANtgtttttgaaagt ttaaaaagaagGCCTCCTATCTAGTGGTATGAGCGATTGCGTGATTGGAA TCTTTTCAGGCCGTGATGGAGTGATCAATGAAGTAAGTCCGGAGAGCTAT AAGCGAATCttgacctttctcaagcaagaaaaagtgaagccttcaAATAT GCGTGGATTGAATCAGCGATTTCATCGTTTTCGGGtggtatttttttcga aatttagcggtaaattttagttttaatctggcatttgtgtaaaaactagg cGGTTTCGCGGGTCACGGGTCTACCATTACCAAGGAGATttgcttctagc ccttcgggcttatacttcattagGTGTGATCAAATCATAGACTAAAAGTG AAAATGTATTGGGTTGTAGGTTTTTGAGTATACTTGCTGGACAAGATTTG CTGGGTATTAGACCAGCAGGTAACAGATTTACGGTAACGGATGATATATg tattttgtaaacaaaaggAAGCCGTATATATTTAGTgacaaaaattgtat ttttgtctGGTAACATTAATTTAACAGGGTATAATGGCTTTATTGAGCTG AGAACAAGGAAACCTTTCAAATAACTTTGATTAAGGGGGAATTAGGTGAT CACATTGAAAAACTAcagcattatttttcttttaatgatAATGCCATCTA AACAATATTTTACAACACAGCTGTTACTTAGAGGCAAACTTATTAATCCC GTTTGTACTGGCCGAGGGAAAataatgtatgtggagtaatttgttattca atggACCGTCGTGTTTGACTAAAGATAAATAGAGTCTGAAGCTTTACTAT TAAGGAAAAAATGATTTACAAGAGTCAGACTTCAATTTAATACACTCAga tttatctttccaatggagaaaactttttgattaggaaaattgtttttttg caaaGGCGCATTTTTTATTTAGGTTTTGTACATATCAAGAGGAAAAGTAA GAGGTATTTTTTAAACACTAACCCAAGGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003731TCONS_00003731Clytia hemisphaericatranscript
TCONS_00003732TCONS_00003732Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003732-proteinTCONS_00003732-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000031supercontigsc0000031:342608..346536 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.65 1.43 1.34 0.61 1.6 1.41 12.28 12.46 5.68 6.99 3.8 2.03 2.4 1.89 2.53 1.67 4.58 3.39 1.17 1.91 2.96 3.19 5.07 3.97 2.01 2.59 2.17 0.97 2.85 3.17