XLOC_001928 (gene) - C. hemisphaerica

Overview
NameXLOC_001928
Unique NameXLOC_001928
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000028:55673..63814-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001928 ID=XLOC_001928|Name=XLOC_001928|organism=Clytia hemisphaerica|type=gene|length=8142bp|location=Sequence derived from alignment at sc0000028:55673..63814- (Clytia hemisphaerica)
NCTGAAGAAAAGTCATGTCTTGAAGAGTATTCAAATAATTGAATCAACCT TTACATCTTCTTTTAGTTGTCCTAAACATGATACGAAGTTTATCAAGGCG ACTTAGGCGAACACTCAGCTTCAGAGGGCGAAGCAAAAGGAAGAAGGACA AAACTGGAGGTACTGTCTCTGGTGGGGCCAGTTCGAATTGGGAAAATGAT GCCCTGACTATTAAACAACAAGGAGGTGTCAGTTTTACTGTGAAAGTAAG TTTTTTTCTAATCTTTTTGGTACAGAAATTTTAGATCAGTACAATTGGTA CACCCAACCAGTCAAACTCAAACAACAACAGACTTGCTCCCGACCCGAGT GGTTGAGATGGAAAGAAAAATCAAGATTAAGAAACATTGACAGCTACTAA AGTTGAGAACTGTTTCAGTTGATATTATAAGATTGATGGGTACCGTGAAG TCGGGTAACTTGTATCAGTGGAGGCAAACATGCATATCCATCATGAATGA CCTTCGCTGTCTCTGGTCAGTCATTAAAATACAAAGTTAGATAAAAATAA AAATGGTAGAGTAGTGACATGTTATGACAGAAGGTTGATAAACTTGGTGG AAGTATCAAAACAAATTTGTTGTCAAAGAGATTTTTAACAGTAAGGCTGG ACTTGTTGGTTTGTTGGTCACCGACCGACCCTACCTCGAAAACTGCTGAC CCGAACAATTTCATTGCCATTTTAAAGAAGATTTTTCCTTCAAAAACTTC AAACAATAAAAAATCAAAACTTGTATCTTGTTTGTCTCAAGCATAAGAAT CATAAATTCCCTGCTAGCTCTTCTGCTTTTTATTCAAAATTACCTAAATG TAAACTAACTATTAACCCTTCCATAGTGTCCTCCCCCTCCTTTATGAAGG GGGGGGGAAACCAATTTTCCAATTTTGAATGGGTGAGGGGGGAAATGAAA ATTTGAATAGTAAAGGGGGGGGGGGAAAGAGGGGGAAAACATCGATAGTT GGCAAATTTGGTGGGGGGAAGTACGAAATCACTTCAACTTTATCTCAGCA ACCAAGGTCAGTCCACATGATATCATGTGATTAGATCATGATTGAAAAAT TAACCAATTTTCGTTCTATTTTGTCTAGTATTCCTTTTGCAGCAAAATTT TATGTTTGTGTCAGGTTGAAATTTGAGAAATTTATGCGGGTATATGGGGG CAACTGATATTTTCAGAATTTTCTGGGGGGAAAGCAAAAAAGAGGTGGGA AACTAAAAAACCGAAAAGTCATTGGGGGAAAAAAAAGAGGGGAGAGAGTT TAAAAAATCAAGAATTTGGTGGGGGGAACAAACCCTGGAGGACACTATGC CTTCCATGGACGAAAATTTCATAAATCGCCAAAATAAAAAAAAATTCCAA ACGACCGACCCACCTCCAACATCTAGGGTCGGGTGCCGGCAAACCAACAA TTTTTTAAGCCCAGCTTAAGTGAAAATACAGGCCAGATATCAACAGACCC ATGTTTCGACAAATCATCCCAAGTTAGAGCAGTTGACGGTAGGTGTATAA GTATAGCAAAAAAAGAAATGGGTGTATAGCAAAGAAATAAGTGTATAGCA AGAAAAGAAATGGGTGTATCCAGACACCAGTGTCATCTATCGAACAACTT CGAACAAAAATCGCAGAACCAAGAGAACGTAATTGAACGCGATCGAATAA TTGCAATTCAATTGTTGAATGTAATCGAATCTCAATCAAACTGCGGATTC CTTGGTAATATTCAATTGTGTTCGAGTAATGTTACATTGGTTCGATTGAT AGTTGACTATGTTTAATTGGTTCAATTGATTGTTAATTCCATTTGATTGA TCTTCGATTTTGTTCGATTACGATTATGTTCGATGAGTAAAAGATAGAGA TCAGACTACTCAAAAACTGAGCTTTAATGTCGGGAGTTTGTGCTGGGAGG TAAAAGCATAAGCTAAAGTTCAAGCTGCTAGAAAGAAGTGTTGTTGAAGG AGAAAGCAGGCTACATTATTTGAGGCGTGTGATAACACACGTACACACCT CCACACCCTAAAATGTCTGAGGAGTGTGATCAATCACACCCCCCCCCATT AGTTCCAAAACTAAAAGTTCTGTATAGCACCTCTTATATCACATGCCTGA ATTACTGAAATTAAGGTTTTAGGAGTATGATTGACTACTAGCCTGAAATT TTCTAATGACGCACCCTGAGAAAGAAGTGAGAAACTGGCTGAAAAAAAAA TTATTCCAATATTTACTTTCTTATTGATATAGAGTTTGACACCACCCCTA ACACCCCCTTATTCTGTCAAATTCCAATAGAAAACTTGAAATTTCTCTGA ACAAAAGATATGGATGTAGTCTGTGGTTTATTTTGACTGAGATTATTATA TTTGCTATAGTTCCAATAAAGTTACTTAGTACAGTTTAGTTATTACCTTC TAACTAACTTTATTATATTCTTGATGAAGTCAAGAAGTGCTTTGTACTAC TTTGTACAATCAATTTTTCACGATTTTGGGAATGAAAAAATTAGTTGTTG TTCTGAACACTATTGATTCCAACTTCATGCCATCTTCATTTTGAAAAGCT GTTTAATAATTATACATTTCACTGAAACAAACCATAGTGCAAACCATCAC AACATAATAGATCCAAATCGGTACGCAACCCCTTTTATAAATCTAAATTG GGTATTATTAATTGAAATATGAATGAAAAGGTAACAAACAATCATAGAAA CAAAATTTACATTGTAGTTTTTTATTTTATTTCATTTAATTAGTATTTAG GATGTCTGGAGGTTTCAGAGTCAAGGGGAACCCAAGTTTGTTCACAGGCT GCTCATCAAATGAAAATGGTAGGTATTTTGTTCAATATTTAAATATAATA AAAGTTTATTCACTTTCATATACTAAAAAGGTTAACAGAACCTGACAGAA CCTGTGATTTTCAATGTAATTTTTTTATGTATAATTTTCTATATTCATCT ATCAGCATCTATAACATTCTGAAAAGTATAACAAAATTTTCATAGATCAA CGATCAAACTTCAAGTCATACTATATAAAAAAAAGCTTTTTGCTCTTATA GAGTTCAGCTGGTAAGAAAAAACAACGAGTCACACTTTGGGTAACAGAAG ACACATTGAGAGTTACAGATGATGAAACTAAGGTAGGGATTTTCACATCA ATGAAAGTACATCTTGCGTAACTTATGGCTTTCAGAACTTTCATCAATTA TGACGTCATAAAGCACTTTCTTCCTAATTTTTCAAAATAGACAACAAATT TTATTAACAGGCAGTTCTGAAATCTACATCCTAATTAATATGCATAGCTT CAGCCAGGTTTCTAGCTCCCCCCAACAAAGTAAGGTCCCCCCAACAATTT AGCTCCCCCCAAAAAATTGCCTTGTCCCCGTAGAGGGAAGTCAATAAAAA ATATATGCGAGTACAGTACTGATAAATGAAAACTAAATTTTACTTGTATT AATATTTATGTTTACAAATCTTTTGCTTTTTATATTTGATTTANNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCC CCAAAAAAAAAGTAAGAGGGGAGCTGAAGCTATGATATGCTTAGTTTGAC GTATAAATGACCATGCCTAAGACCCCCAATTTTCGGTGCCAAACTTATAT TGTGTTTTTGAATACTTTGGTTTTCAGTCACTTGTGGTTGACCAGGTCAT AGAAAAAGTTTCATTTTGTACTCCTGATCCACACGATGAAAAATTGTTCT CTTACATCTGTCGAGATGGGACTTCAAGAAGATGGCTTTGTCATTCCTTC AAAGGCATAAAGGATTCAGTAAGTCTTGATTTCAGAATGAGTTCAATTGT CTTTCGATTATCGGAATCATTCAATATCCAAACCAATCAATCGATTATCG GAATCAATTAGTATTCAATCAGTCGATTGATTATCAATGAGTCATCGATT AAAAAAAGTTGCAATTGTATCGAGTGGGGGAGTCTGGTCTAGAAGTATCA AAATTCACACCTAAATTAATTGACCTTCTAGGCACATGCTCAAATGATTT GAAGTTTTGTTCTTCTGAGTTTAACATCTATATATTAATAGTGGTAGTCT GTATGTCGTTTTGTCGTCTTTCTTTCTTTCTGTCTGTGCTACTTTCGTTT TCGCACGCAATGTTTTTGTTCTTCCAAAAGATGACTTTTATTTTGTTCTT GCTCCACAAATGTGTTAAATCAGATTCGCGCCGTTTATAAAGACTTTGTT TTGATTGATAGATTAGACTTTTTCTTTTTTTTTCTTTCTTTTCTTTTGTT TTATGTTTTCGAATGTAATTAACGACCTTATTTCATTTGAGACCTTCGAA TTCTTTTCAAAACAAAAGAAATCTTTTAAACAGAATCTGTTAAAGAAAAG AACAAATATAAAATAAAACACAAGAATCACATAACAAGTTTGTTAGAACA NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTCGTAAAAAGGGACCTTTAA ACATGTATGTCGATAATTATTTTGCTGTAAATCTAAGTCATTGTTGAATT TGAAAAATTATTGAAGTTATGACGAAGTTATTTCATAAAAAAGCAACATA AAATTGAGCTATCTATCACGCTTTTTTGTCTGCGTGTCCTAGCTGCCTTC CGGGGGGAGTATGGTTGCGAGCTGACTTTCGGCCCTGCCCCTCGGACCCT TAGCAGAATAAAGAGGAGAAGAAACAAGGGAAATTGTGTGAATTTTAATT CACTTTTTGGAACTAATTTGACCAAATTTCTATCTTACTAAGGGCAAAAA GTTGAAATTTTCCTATTTTTCCAATTCTTAGTGGGACTGAAGTTTGATTT TCCGATTTTTCAAACTGTCATGTTTCAAAAAAGGCACCTTTAAGGCTGGC ACATACCCATACCCATACCCTTCTCTTGCCTAAGTATCCCCTCCCCCGGG CTGCCTTTTTTTCGAAGAATCGCGTGTCATGTCTATTATTTCACTCCGCT TATCTTGACATCAAAGTTTTCCTAAACATCAAGAACTACGGCAAATATAA CGCAAGCGAAGCGAGAAAAAAAATCTAATTGCAGAGCCGTCTCGGACGTT GCTGGTCGCCGGTATGGTGTAATTTGGGAATGATGCCCTTTCTGTTTTCT GATCATTTTTGCAACAAAAATCTTTTTCAAAGTTTGGTTAAAAGATATGT CACCCGGGAGGGATAGAGTCGAACTTTGAAGAGAATTCTTCCCTTTATAA TTTTGATTCCATCGTGTTTAAGTCACCTTCCCAACATCTCAAAGGACTTT AAATGCGTTCAGCAAACAGCTAAACCGGCGTGCGACGCCGGGTACCGGCT AGTCCTTTTTAATAAGTTAAGTTTTATAAGTTAATCTTTTTATATAGTAA GTTACGCCAATGTTTCAAAAAAAAATGTATGCTTAACATCTGTTTTTCAT TTCCTGTTTAGGGTGAAAGAATAAGTCACGCTGTTGGTTGTGCTTTTGCT GCCTGTCTCGCCAAAAAACAACAACAAAATCAGAACCAGCAAAACCTTCA GGTGATTGTTGATATATAGTTTGTTTTCTTTTGTGTAACCTTATTTCAAT TCAATTAAATTACAGTGTTCCTAAATTTAAAAATATTTTATGTTTGAAGT ATTGGATACTTTTTTCTGAAGAAATAATGAATTTTTAGTCTATTTGTCTG CCTTTTTAAATTTTAAAATGTGTTAAATAAAATGAGCATTATTTTACTTA TAGAGAGGAACTTCAACAAGAAAAACGCTTGAAAGTCGTCCAAATGGTGT AAAACTTCCACAACAAAGTGTAGACACATTACAAAAATTGAATGAAACAG AATATACTGCTAGAATAGAAAAAGCTAACCACACGCTTAACAATACATCA ACATCAGGTGCTATGAATGGCCCAGCTGATATTAGTGTAGCTGCAACTCC AGCACCAACCACACCACAATCAAAACAACCACCAGCGAGTGCATTTGCTC CAAGACCACGCCCGAGTGGATCTGGCTCAGATATTGGTGGACTAACAAGA CACGCCTCTTTACCATATCGTGCTAAAAAATCTGCAGGGTCATCTACCTA CCAAGCTCTGACAGAAGATCCATTACCCCCTCGGCTACCAACTACTCCCC CACCCATGACACCAAATTCTGAACAAGAATTCTGGTTAAATAACACTACA CCTGGATTTACAGCCACCACAAATACAACTGTGACTGTTCAAACGCAAGC CAACCCTTTCAGTCAACAGCCAGTAATGTCTACACCGCAGCAACCTTTTG TTATTCAACAACAGGCTGGAGTCACTCCCATTCAACCAGTTCCAGCCGCG GAACAACAAAGTCCTAATCCATTTGTTAACAATGCTAATCCTTTCACTGA AAGATTTGTATGAAAAACTTGGCTACTATGGCACACATAAGTGTAAAACA AAAGGGATAACAATGCTAACATATATAATAATATGTATACTCATACCTGG TGCTGAATCGAGGTGGAATTCACTCAGACGCAAAAAGTAGTGCTTTCAGA GGAAATACTTTTCAAACTAATAAATTAGAATAAGGAATGTCTAGAGTTGG ATTATTATGAAGGGAACATTGAAAATGGCACCTATTTTAATCTTTATGTT GGAAAAATTCTTTTAAATGAAAGTTCCATCAGCAATCCGTGTTCTTTCTT GTATGGAGCATGATATCTTTATTTTGTATTTTGTTTTAAATGGAAAATTT TTACACGCTTGTTTTATGTATAGATTTTGTGTTATTTTAGAGAAGCTAGT ATAGAGTTTGCTCAAGGCCTTCTCTTACAATCAAGACGATAAATTTAGAT TGTACTTTTTAAGTCTTTTAGTATTATCAGTNGCAAGTCGATAAATTTAG ATTGTACTTTTTAAGTCTTTTAGTATTATCAGTTTTTTTGTTTTGTTTTT TATAATGATAAAATCACAATTTTGTTTATTTTAACGTATCGTATATTAAA TGCTTTTAATGACGATCGCGATAATTGTTTTTAAATGTGTTTACATGGAT ACATTTTTTGTATAATAATATTTTGAGTTAATTGAGATAACCAGACCAAA CTAACCTTCTTTTTCAATGAAATAATAGGGTTATCTTTTGGGATACTTGT CTTTTTTTTATTGAGCTTCTTGGTTTTCAGAACTTTTTTTTATCTATCAT TTCAGCTAATTCTCCTTTTTACGTACAGTAATTTATAGATAATTTTTTTT GGTTTCCCTTTTTTTTAACTGACTAACTTTATAATGTTATGTTGACAATA CAATTGTTTTTCAAAATAATGTGTTTTAGTTTTTTAAAGGAATTTAAAAG GAGTTTTCGTTTTGACGGTGTTGGGTGAATGTTTTGGGTGTTATCGATAA CAAGACTGGTTTTGTTATTAATTTTTTCCATCTATTCAACAGAANGTGTT ATCGATAACAAGAATGGTTTTGTTATTAATTTTTTCCATCTATTCAACAG AAATTGTTTTCTTTTTTTCAATTCGATCTCATCGTGTCAAGATTCGGAAG TTCTTTTTGTTTCAACTTTATCATCTATGTGAATCTTCTTTTTTTTCTTA AGCTTTGTCATTTTAATACACTCTTCACTCAAACGAAAAAAATACATTTT GTGACCACGTAGTCTTACTTTGACATATAATAAGATAATCAAAATGACCA CTAATTACACGAATCATGAATTTATATTTTGTTCTTCCATTTATGCTTTT AATTATTATTTTTAACTGAAATTGTAATGATCTAATTATGTACAATATTT ATAGTTTTCTCATAAACAATCTCTGTCATTATTGTTTTTTTATGGACAAG GTCTACCCAAATGTTTGTTTTTAACCGTTGGTTTGATACTGCATAAAGCG TATTTCGAAAGTCTATTGTGGGCATAAAGTGATTTGTACTCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003469TCONS_00003469Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003469-proteinTCONS_00003469-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000028supercontigsc0000028:55673..63814 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.17 13.86 11.55 11.06 434.99 334.04 157.34 166.17 100.16 115.1 83.18 77.94 73.82 66.89 58.71 54.63 94.3 94.58 58.52 70.94 89.34 93.25 48.42 59.37 48.06 54.8 138.58 130.57 140.58 143.81