XLOC_001859 (gene) - C. hemisphaerica

Overview
NameXLOC_001859
Unique NameXLOC_001859
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000026:973960..976824-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001859 ID=XLOC_001859|Name=XLOC_001859|organism=Clytia hemisphaerica|type=gene|length=2865bp|location=Sequence derived from alignment at sc0000026:973960..976824- (Clytia hemisphaerica)
GGTCGGACAATTCACTATGATCACGGTTAATTTTCAGGTGTCATTACGCA
TGTTTGCAGTGGAAAGATACTCTGCCCTTCATCTGACACTACTGGTCCCA
TCCAACTTGTCGACATCCAGGATTGTCCTTATAGTGCTATGGATTTGGAC
GAGCGTAAGAAATTCCGTAGAAATCCACGTAAGCGAAGCTTAGTTCGTAA
CTTTTTCTGGATCAATATTTAACGTGGATAGCTTAGTAATCTATCACTTT
CAGCTTTTAGATAGTCTTTCGTTTGTTTTGACGGGGTCCACGGCCATCCG
GTTCGGGTTCAATTATCTATGAACAAGACGGAACGTTTGAAGGAGCGACG
CTGACGTCTTGCCCATTCGGTCATCGCTCTAACTTAACTACTCTTGGTAA
CGAAATCATAATTATTCTCTCTCATTCCCTTTCTTACTAATGCTCATGGT
TATACTTAAATTATAGTATACGGATCGATCCACAACTTGGCGGCTCTTGT
TTATTTCTAGCTAAGCCTCAAACTCCTGCTAAAATCGAATTTTATTAGGA
AGCTACTATACGACGCTAAATACCTAAGAATTGTATCTAAGAACAGCCAC
GAAATATCTTCGATATCTTCTTATGCAATTTAACATTTAATTTAATGAGA
ACCGACCTTTTTTTAGGTGGGTTCTTGGAGTGGGGCGTACACCAATGCGT
GGGGCCGTACGGAGGAAATATTGCTCCTGAATGGTATATGGTCCTCACAA
GTTCGTGCACAGCAAGAGCGGCGCAAATTGTCTTCGATTTTGGTAAGATA
TAATTCCTCTAATTAGGCTGGACTTAAAAAAATGTTGGTTTGCCGTCAGC
CGACCGACTCTTCTCTAAACTTTGCCGACCCAGAAACTTTTATTGCTAAA
AAATGTAGACAAAAATTCCATGAATGACCAGAATAAAAAAAATTTCCGAG
CGACAAACCCACCTCCAAAATCTAGGGTTGGGTGACGGCAAACCAAGAAA
TTTATAAGTCCATTTTTCTAAGACATTACTTTAATGGAAAGGTATTGTTT
CATTCCATTTTTAACCCTAATTTATTGATCAGCCTGCGTTGGAAAAGAGA
ATCAACCTTATTGAAAAAAAAGTCTTTCCATCAAAATTTTCTTGTAAATC
TTCGTTTAGATAAAGGTCCCATCAAAGTATCGATATTTCAATCGATGGGC
ACACTGTCTTTCAATAACTTTGAAAATGCTATCAGAGCCAAACAAGATAG
CCCAACCTTGATCACTTATATGGATAATTTCTTTCATCGTACAAAAACAT
GGGATCAACATGGTATGCGGTGGGAAAGCGTTTTTCAAGCTAGAAGCACA
GGCGAATATAAATTCTACTTGATGGCTAACGATTTTGCAAAACTTTACAT
GGGCAAAGATGAGACAGAAACGTCGAAAAATTATTGTACAGGCTCCACTG
GGAATAGTGGCCTAAATGAGTAAGTTTGTTATAAAGTTTTGTGAGCTCAG
AAATTCTTGGTTTATATAACTGATCACCATAAAAATATAGTCCAAGTTTA
TATAATATAAAGATGTGTTTCAGAGTAGGCTCGTAGGCTAACTCTCGTCT
GCTCATTAGTCTTGAGTATAATTCTGATCACTGCAACAGAAGCATTTTCG
GTTAACTAGCTAGCGTACCCAGTAAATTTATTTCAGAATTCACCACCCGG
ATTCTCATTCCAGCCACGCCACTTATTTCAATCCTCCGACTACGAGATAC
CCGTAGAGATACAGTAAAATAACAAAAAACATCCGATCAAATTCAAGGAA
ACTTCATAATAAATAAAAGAGGCATGAAATTCGGGCAAAACTAAGAACAT
ATTAAAAGCACCTAGCCTGGAAAATTACTCAAGAAATTAAGATGATTACG
AATAATTTAGCGTAAGATAAAGGCTGAGCCTAGCCTAGCCTAGCCTAGCC
TTTACACATTTTTCGATGATTTAGTACTAAAAATTGGCTTTGGTTAGACA
CATAACGTCTCTAGCCTGAGCTATCAAAAGCAATGAAGATGAAGCAGGAT
GAAGTGCTTTTTAATGATCCCTTTATCCAAATTTTTCCTTCAAATAATAG
GATTTTTCATGTCTTGTTAGGTTACGTAATTTCCACCATTAAAGAAGCAA
ATGTTCGAATCTGTAGGGACAATTCCCTACACAATCGAACGTTTGCTTCT
TTAATGGTGGAAATTACGTAACATAACAAAATGTGACAAACCTCTAAAGT
ATTCGTTTTTAAATCTTTCTTTTAATTTAGTGAGTTTTCATGCACACGTT
ATTTGGTGAAAGGAGCGAAATATTACATCGAGTTATTAACGTATGACGAC
AATCTTTATGATTGGCAATATTTGAAAGTAGACAAACCAAACTTTGAGGN
CAAATCGAACGTTTGCTTTCATAATGGCGGAAAGTACGTAACATAACAAA
ATGTGACAAACCTCTAAAGTAGGTATTCGTTTCTAAATCTTTCTTTTAAT
TTAGCGAGTTTTCATGCACACGTTATTTGGTGAAAGGAGCGAAATATTAC
ATCGAGTTATTAACGTATGACGACAATCTCTATGATTGGCAATATTTGAA
AGTAGACAAACCGAACTTTGAGGATAAAGTCCGTGCCATTAGCTATGAAG
ATTTGGAATTGCCAGCTAATGACTTGTAAAGTGAACCATATGGAGATTTA
ATGATGTCTATGGTTGATGTTATCAGTCCCTGTATGGTTCTGAATGAATA
ATCGAACAAGACTTTTATGGACCTACCTGGTTAATCTACAGAACATTGAA
CATGAAATTGAAAATGATTGAAGCGGAAAACCCTAAAACCCTTTCCCTAG
TCCGGCGCTAGAGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003364TCONS_00003364Clytia hemisphaericatranscript
TCONS_00003363TCONS_00003363Clytia hemisphaericatranscript
TCONS_00003362TCONS_00003362Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003364-proteinTCONS_00003364-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000026supercontigsc0000026:973960..976824 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.68	12.41	10.89	8.47	2.13	4.67	7.56	6.54	2.3	2.18	0.7	1.4	1.04	1.65	0.2	0.21	0.52	1.57	2.59	1.75	0.33	0.29	9.49	16.31	2.4	7.96	0.47	0.83	2.33	3.38