XLOC_001629 (gene) - C. hemisphaerica

Overview
NameXLOC_001629
Unique NameXLOC_001629
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000024:703200..706263+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001629 ID=XLOC_001629|Name=XLOC_001629|organism=Clytia hemisphaerica|type=gene|length=3064bp|location=Sequence derived from alignment at sc0000024:703200..706263+ (Clytia hemisphaerica)
ATACTTTTCGTCTCCAATTGAATAGTCGTGAAAGTTATCACTTTTTCTTG
AGTAGTAGTGTAATTTGTGTGCAAACGTAGTTAGTGCAAATGGTGATGGG
gaattgaatttcggtcaaacgaaacagaaaaatgtcaatttttagattCG
CCGAGGTATGCTATTAtaattttggagaaaattaaTACGTGTATGTGTTT
GTACAGTTGAGCAAATCTATCTAGATAGAATTTTGATTTGCAAAAATATC
AtgaactacatgttttttataagcattataGATTAAACTtttaagcatat
ctaggcttaGATatggtaaaaaattaaaaagcatATCCTAAGCATTATCC
TCAGCCTAAATTCTCCACTTTTGACTGTTCTTAGAATTTACGAATTTCTG
AATTTCTCTAAGATTTTGTTCTAATACCTATATGCATTCTTCAAGCATTT
CTCTCGATTTAAAGCATCTCCGAACCAACTTTTGGATTTTTAAATGCTCA
TAAAAAACTTGTAGCGTACATGAGAGGCTGACGGAACTCGCTAATAATGA
TGAGAGAATAGGAGGAGAGCTTATGCTCTTGTTGTACACCGAGAACACTG
CAATCTTAGCCTAATATCAcctaaagaatttctttttgaataaccctttc
agtcccacgcGACCGCACTGCGGTTCCTTTGGACCCGTCGTTTTTTCCCA
GAGGACTGCAGAGCGGTccctgatttattttttaaattgtgatgttttgg
cgggaaataaagagatgtctttaaacagctttcaaagaaGATAGGATAGC
GCGTCGTGTGCAAAAAACCGcataaaaaaagcttgttcgagtaaaaagtt
ttgtttacaaaagtatttacaaaaatttttgcaagcaaagtctgtaaggc
cgaaaatgggattttttacaacttctatcaatcattatgatttttctatg
agagctaatcaaacaattcttttttcagttagtagaTACTGTTGTGCTAA
ACATTTATCATAAGAATTATTGggttttaatcattttttcataaaaaaaa
ttaccattgaatggcaaaaaattgctgttttaaaatttttttgtgccttt
ctctggtcacgtgacacgctgatgacgtcattttgcaaatttttttcttt
caaaattatcctcatactataagtgaaaaaaggtgaaaacttgagaggac
taggtttagtgattccagagatattgaagAATGAGTGAATGCATTCAAAG
ACTCGTTTTACGGCTCTGGGAAAGTAGCTGTGAAAactctgggactgaaa
gggaTAAGGCTGAATGCACATGTGCCCGGAATAATCCTACAATTGGTTAT
ACTCAAAACAAATCATTTTGTGATGTAGAATCATCTGTGCAAATTGTAAA
TAGATTATGTGTAACTTGAAAAAGTAAACTTTTGGTTGATTTCTATTTGA
AAGACATTGACATTCACAAAAACTCCCACATAAAAGTTACTTTTCTACTG
GAAGAAGCTGGTATTGTAAAAAAACACTTCATAAAATATCAACATCAGTA
TACAGAAGAAGAAAATGCGTTTTTATCTTCTCACTTGTCTTGTTGTCATC
ACATTAGCACGTGGCAGTAATGGGCTGATCGACTCTTTATTAGGAAAGGT
AAAAAATGCCAACGATAACCTGTTTTGAAATATCTGTTGGTTACGTATAT
TCGACTCTAGATATCTcgatcaaattctttttttatttgagctCTTCAGT
CAGGTATATTCTCCCCTTTCTaatttttcaccccctggacataGTAGCAG
TTTTAGCAGgattttcaatacccctggataATATACCTTCCAGCCCATTC
TTGGAGCTTTCAGCGCTTGGGTTCGTGAATAGTTGACGAAAAAACACTTT
TCTTCTTACCTTTTAGAAATGCACTGTGGATGCGGATTGCGAGGCGAACG
AATGTTGTACACCCACATTGAGTATGGGTGACCGATGTCGTGGTCATATG
ACCGAAGGAACAATTTGCTCATCTTTCACTGAAGTAAGTTTATACATTGA
ATCCAAAGCAATTTTATATATCAAACTCAGTTCCACTGTTTCACCCAAAA
TTGTAGTTTGCCCAACTAAGCATCAACTTACTCACTCATCTAGGATGTTT
TCGTAGCTTTTACCGGTATTATCAgcattagacgatcctatcgtctacgc
ACGAGGTCACTAAAAATGGAATAATTTAGGAAGGGGatgaattttgtgaa
aaaggagTTTGGTCCGGTACGGAGTAAGCAGTGACGGCTCAGTTTGTTCC
ATATTCTACAACCGCTATTTTTCCCTATACTGTCCGAACGGCTCTAAACT
CTTTGCATATATTTTCTCCGCTTTCACTATTcctctaacggacgatagca
cTGTCTTAACCATTGCCAGCCTAAAAAAAGTATATAACTACACCCCTGGC
TCACAGCCccgatggaacttttttcttcgtTTGGGTAAagattcctattg
aaatcttaATAGGGATAGAAGTTTTATTGCTCCAAAgttaaaaaacccag
tgggaatggtttggagtgcaatctttaaacatggaatttcaaaaggatga
aatcaaagtcaatttcctagtGGGGCTGAAACTCAAGGGTATTTTACCAC
Cgtggacgaaatttttgcctaattttccagtggggctggggtcccagtgg
gtctgtgacacaggggtgtatgatTGTGAGGTACCACTATATGTCTCTTG
ATTGAGGTCAATCTAACAATAATCTAACTAGACTAGAGAAGGGTACCTAG
ATTTACGGTGAAAATCCAACCTCTCAAATGACAGACAAATCaattatttt
gatcatttaTTTTGCATAGGAATTGATCAAGCGGCTTCACCGAAGATGTC
CTTGTGAGGCTGGCACCTCTTGTAAACGAACTGGTAGCATTCTGGGAATC
TATAAGATCAACAGATGTGTCAAAGACGAAGCTTAaatcatgattttcaa
atttatatataaaaaaattattatcatGGGAAATAACAAAGTTATCGAAT
TTATTTCCAGTTCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002963TCONS_00002963Clytia hemisphaericatranscript
TCONS_00002964TCONS_00002964Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002964-proteinTCONS_00002964-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000024supercontigsc0000024:703200..706263 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.41	0.34	0.78	0.15	21.88	14.36	27.05	25.82	15.48	11.18	5.94	9.98	37.54	41.89	30.12	59.66	9.07	9.06	101.37	89.41	45.2	46.3	77.12	82.56	114.89	124.54	4.55	7.19	30.05	41.79