XLOC_001575 (gene) - C. hemisphaerica

Overview
NameXLOC_001575
Unique NameXLOC_001575
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000023:1014120..1018345-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001575 ID=XLOC_001575|Name=XLOC_001575|organism=Clytia hemisphaerica|type=gene|length=4226bp|location=Sequence derived from alignment at sc0000023:1014120..1018345- (Clytia hemisphaerica)
TTCAACACAGTCATGCTGGTCAATGGGTATTTCTTTTTATTTTTATTTAT
GAATTTCTATGAATTATTGCTACATTTTTGGTAGCCTGGATATCCAAGCT
CAAAATTTTAGAAAAAACAAAGTTTACCTAACATGCAAAGTTCTAAAATT
ATAGAGCTTGGTCTCCCTAGAGAATGAAAGTGAAAACCCATGTTTCCTAG
CCAACCCAGGGCAGCAAAACAGAAATTAATAAAAAGCAGTCTTCCAAGAT
CTAAAACTATTAAAAACATCCAAAGATTACACCAAAGTCCATAAAAAAGT
TTGCAAGCATTATCATGACCAACCATGTTTTCTTGGAAAATGAACTTGCC
TCTGTTTTCTTCTTTTTCATGTTTTCATGTAACAGAAAGCCNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNTTTAGAATTGCTCAACGCCGTGTAGATTGGCCCTTACGGTTTTAGCGA
AGTGAGCGCAAGCAAGCGGACTGCATTCTCTTAAAGAGAATGCAAATCGC
TTTAGGCAGATCAGGCTGTAAACCAGAACATAAAATATCAATATGGTCTG
GATATCCAGGCTACATTTTTGGTGCAGTTTATAACCACTTTGTTCATTTC
TAATAATTTAAGACAAATTTGGGTTTCATATGTAAATTATCAAAAAGTTT
TGTTGCATATTAAAACATTTCTTTTTTCCCTTTTCTAAATAGTTTAGTAG
TTCAAAGATTTAACTTATTCATTCTAATTCAGGTACAAAGTGTATTTTCA
ATAAAGCATTTGGGTTTATATACTTACGCAATATTCAAATTTTCAAAATA
ACGCAAGCAAAGTACACTTTTGTTTTTAATGAATTCAATTGTATTTAAAC
TTATTATTTTTCTCTATCCTTCCCTTCAGACTACAAACCTCTTCAAAGGT
TTCACCACTGAGCTTATGCCACCGTGCGGATTGCACCTAATTCTTGCAAA
TCACCGATACATCGGGAAGTTTCTATTTGATGTTGTTAGCAAACGCAAAA
TGGAACATTTGATACCTAGTGTGCTCAGGAAGATTGGATGTGGTTATTTA
GCTTATCAATTGGAACAGTACCACAAAAGGTCATTTTTTTTCAATTTCTT
GACAAATTTCCACATTACACAGTTGACAAAAAAATTGAAATTAATATACT
AGATAAAAACTTATTTCTCTGACTGCATGATAGCCAAATTTATTTTTCTA
CGTTTTGAATCGATTTTTATTCATAACAATATCGTCGCATGAGAAATAAA
GAGATTTTTCTCCATTTTCCTTGTTTTGAGATATTAGCATTTAAAAATTT
AGAAATGAAAAGACTTATCTCCAGAAAATGGAGATAAATCTTTTTACTTC
TCAAAATTGTGAATTTTGTTACCTATTACTTTACATATAAAAAATGAATT
TAAGTCTTTTTACTTTGGATTTAGGGCTGTCTTTTATATATAATTTGTTC
AAGTCTGCAAACCATTAAAAAATAGAGATAATATCCAAATTTAAGGCCAA
AAAGTCAAACCTCATGGATTTAGGTCCGTTTATCTCCAAGAATTTTTTCT
GAAGAATATGAATCAATCATTGTCTCATTTTTCGAAAGATTGGAGTTAAG
TCTCTTTATTTCTCATGCGACGATATTTTTCTCACCAGCAACAAAAAGCA
GTATGATGGGTCCGACAAGTTGAAAATGATCGGCAATGATTGCAAGTTGT
TGGAAGAAAACGTGGACGCCTTGTTAGATACATTCATTCGAGCTGAATAA
GGTGAAACATGGAAATCCGATTCAACTGTGAAACTCAGACAGATCCTCTC
TTTGTACAAGTCATTTGCAGACCTTGCAAGGTTTAAAAAATTGATCAAGA
TTTTTCATTCTTCCTTTTCTTATTTCCTAGTCTTCAATCAAATATTTTTT
GCCTTTTACCTTACCGGATTTTCAACTTTTCAACTATGGAACTTAATTAT
CAAGAAAAACCATACACGTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNAGTTCCTGTAGAGATATCGAAAAATTCCTTTG
AAAACAGTATGGCGTCTCCGTCTGACTGAAACCAACACAACCGGGGCTCA
TTGGGAGTTCTGAAGCCGATAAGGATTCTCCTTAAACCCGCAACTCGACT
CCAAGCAAATAGTTTTACTTAGGAGAAGAGCGCGGATTCTAGACTGTTCG
AACCGGAGCTGGCCTCTACACTTGTACTGTAATTTTGCGCCCCATTTGTG
TCAACAACTTGGTGCGACAAGAGCGCGAGAAAATTTGAAGGCCTTCAGAA
GCCAGTTGAAATTTCTGAAAGTTGAGTGCACATCAAAATTCAAAATTTGT
AATTATGGAGCGAAAAAAGAGTTTTGCATGCTAATACTTGGGGAAGTTGC
TTTTCATATGATTATGAAGTGAGTGTCTTATTATCATTTTTAAGCGAGGG
GTCCCTTTAACATAATTTTTGTTTATTTTACTGCAGATATGTCAGATCTG
TTACACCAAACACGGAACGCATAGCAACATTTAACATCAGAGCCGAACAA
TATTTCAAGAAGTTTGTTTCGAATGCCAGCAGTTCAGCAGTTGACAAGTT
ACCCTACCTTCACTACTTACGATACCATGTAGGTGACTTAATGAAATTCC
ATTCCGACTACTTTGGTTTTGGGTATGCTGTCATGCTGGTGAATATTTGA
ACAAAGTCATCAAAACCAGTGAAATTACTGATACCAACTTGAATAAAAGT
AGATTTCACAAAATTATCCATTTGATCCGAGTAAAACAATTAATCTTTAC
TGACATAATTTTGCGTAAGGTACCATCCATTAAATGTGATGCCTGTAGTG
AATTTGGGCACAACCAAAAGAATAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002902TCONS_00002902Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002902-proteinTCONS_00002902-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000023supercontigsc0000023:1014120..1018345 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.26	0.41	0.03	0	0.35	0.41	0.47	0.54	0.58	0.59	0.35	0.64	0.55	0.32	0.43	0.6	0.67	0.28	0.61	0.25	0.96	0.81	0.19	0.42	0	0.15	1.32	0.62	0.77	1.03