XLOC_001557 (gene) - C. hemisphaerica

Overview
NameXLOC_001557
Unique NameXLOC_001557
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000023:268608..272838-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001557 ID=XLOC_001557|Name=XLOC_001557|organism=Clytia hemisphaerica|type=gene|length=4231bp|location=Sequence derived from alignment at sc0000023:268608..272838- (Clytia hemisphaerica)
CTCTTTCGGGGAAAATTTTTTTCTGGTTTATAGAACTGGAAATATGCCGG
AAATGGCTGTGTTTTTTGGATTTCCACGACATTTTTAGATTCAATTTGAT
CTTATCCTAAAACAGAAAAAGGTATCCCATGGTGATGCCTAAATCTTTGC
CTCGTTTGATTTCCAAAACTTTTTTAAACTCGAAACTCCTTAAAATCACC
GGAACAACCGAAAACCGGCGTAAACGGGTTTCCTTATTTTTTGAGTTGCA
CTTGACAAATTTTCGTGATTCGTGAAAATTTCGGTCGACGGATGATCCGG
AAATTTCCAGAAAGAAGTATTTTTTTTCTTATTTTCTTTTAATGTTAATG
TTTTCTGTTTATATGTTAAGTATGTCTATACAAAGTCTTGTTTTTTTCAT
GGAAAGGTTTATAATGATGCTGTCATCAGAAAATTTTACACCTCGAAAAC
TTATTCGATTTAACATTAGATTTCGAATATTTTAAAAACAATAATTTTTG
CTTAGCCACCTGATGACGTCATTTTGCAGGTAGCTAGGTGACATAAGTCA
GTTTTTGAGTCAAATCTGTCTGTCGGACAGCTTATTACTTCTAAATATGT
AGCGATCCTCGGTTGGCCAAGCTTTCGTTATTTTCAAAAAGATGAAGAGG
CTTGTGTTGACGGGATTTAGGATAATTGTTTTGAACTCTACTTAGCTATC
TCAAAAGTGACCCTGTAAAATTTGCGCGCCAAATTAATCAAAGCAAACAT
CTTGTCTTGACATCAAAATGACTGGCAGTTTCAGCCCATTTAAAATATTT
TTAAAATAATGATGTGCATAAAAATGTAATGTGGAGGCAGATTAATTGGT
TTTCATATATAGATCCCTTTTTAAATGACTTTTTGTGCCTTGTTTGATTT
ACACGAGTTGCCGTATTACATTGATGGGTTTTAAATCGATTAGGAACGTC
TCTTGATCTTGTCCTTATTTGGCGAGATAAATCATTCATTCTGCTGACAC
AGCAGAATTAGCAGCGAGAAAATAATTTGAATGTGATTGTTCAATGCAGG
TTATGGGTCTGGTTTTGCCATTCGAACGTTTTTTTCTTCACAGTACATTG
TTTCCGGAAAGAAACGGAATATGGGTTACATTCGTTACCCTCGCCCAGAT
TGAAAAACTCTTACGAAAAAGTGAAAAAATATGTTTTCTATGAACAGGGT
GTTCCGTCCTCAGGTTATCTGATTTCTTCCATCGAAGAGACTTCATCATT
ATTGTCATTTAAAACATAAAGTGAAAGGTTTTCTGTTGACATAAATTCTG
ATTCGCTTTCTTTATGGACACACCGTATTCGACCCTTCTTGNTACATAAA
TTCTGATCCGCTTTCTTTACGGACACACTGTATTCGACCCTTCTTGATGT
TCATTTCTTTTTCTTCTTTACTTACTAGTTTCTTCTTCTGTGCTGTGTTT
CTATCATATTCTTACCACAGCACGACATTACATTTATTACATTTTCGCTT
GGGACACTTCACAGTCCAAACTCAGTTGCTGCCCATAGAGTTCGTTTTTC
CCTTTTACCTATAAAATAGTTAACTAATCCTAATATAATAAAATTTATAT
TTTAATGAAAATTTAATCATCAAAGCTCCTTCTATTGTGGAAGAAATGAA
TCACTAAAGATCTGCAAAAATAAAGTAGTTTAAAACTGAAGCATTTTACA
AAAGCATATCTACAAAACATACAAAGTGCTGTATCTTAAAGGTGAAAAAA
TTCAAAGGATTATCATTCAGACAAACTCTCTCGAATTGTTCACAATATTT
AGTCTACGAGTAAAGATGTGAATCCTAGAAACTATCGGGCAAATTATTTC
CGTTCGCAGAGTGATATTGACCTTTTAAAGATGCCGTACCAACCTGGAAA
GAATAACATTTTTGGTTTCGTTACCATATGTTTTGGTGTTTTATCACTAT
GGTTACTTTTAATTACGGCCGGTGGAAACAACATGGTAACCTTAACTTCG
ACTCAGCCATCACCAACTATCAATCATACTCAACCGAAACATCAAACGAA
ATTTCGAATCGATCTATGGAAGATATGCCAAATACAACGTTCAAGACGCA
ACGGCTTGCCTCGGTTCGCATCGTGTCGTGCGTTCGATGATTCCGTACCA
AGCTGGAGTATGCTCCAAGTTTGCCGTATATCGTGCGTTATTGCACTTTC
AATCACTTTTCTCGGAATCATTTTAAATACGGGACATCTTATTAACCATA
AACTCTCCTTGTGGTTTGCTTTCTCATTTTACGCATGCGCGTTTACATTT
CAAGCAATTTCAACATTGCTCTGGGTGAAAAACGCTAGACCGTTTCTGGT
TGAGTGGATAGGAGGAAATTCAACACATGGTTGGACTTTTTATGTTAGTG
TGGCTGCTGTCACTTCCCTTGTGATGACAGCTCTCTTTTCTGCGCTTGCG
CAAACGAGAATTTGTAGAAGACGCTCTTCAAGATTTCGCTCAGTCAAATC
TCGTGCTTTGCTGACTGATTTTCAAAAAAATTAAAACTTAGTTGAAGATA
GTTGAATTCTTGTAGTAATCTAATCGGGAATCTTTGTTAGATTTTGGGGG
AACATTCGCCATGTAAAATTTCATTCAATCATCCCAACAAAACGTTATAA
GGAACTGAGCTTGCATTGGTGTTGCATCGGTGTTGCATCAGTGAGTGTTC
GATGAGGTTAAATGTCTGAAAAGATAGACAAGACGCGCATACTTTTGATT
TCATTTTACTTCATTATTTAAATTTGGAGATGCGATTCGCCTTAAATGGA
AGAAATTTTTGTAGAAAGAAATGAAAAGTTCCAGACAGTGTTCACCCTTT
TCCAGATAAAATATACATTTAGAATTGTGATAAAATAATCTAAAATGATA
GGTTATTAACCAAAATAAAATCCACCAAATCGTATTAAAATTAAAACCTT
AGTTAAAACCTTAAATTAAAAAATTGGCAAATTCGTCAAAAAGTATTTTG
AATAAATGGTGACCTTAAACCCAATAAACCGGTGATATTTTACCCCCCCT
TCTTTTTTTTAAGAGGTAAAACTAGGATTTTATCAAATGAAATGAAATTG
AAAATGAAAAAAGGTTTGAAAGCAGATTGAATTTAGAATCTCAAAAGGTG
GCCATTTGTGTCGATGCTGCTTCTTCATATATTTTACAATATGACCGAGT
ATATTTCGTGTTATAGAACATTCAGCGGGTAACGTTGAATAAGACATTTT
AATCTAATAACTACACTAGTAATTTATCGTACTTTACAGCTGTAAATTAG
ACTGTAATTATTGGAAAGATTATCTGGAATTAACCGCTGAACAAATCTTA
TTAAAATGTAACATAATCTCATTATCGACCTTTTCCCGCTAATACTCCGT
TTCTGATCAAAATCTCTTAGTGATCGGCCCGCTAAGCTAGGATAATTTCT
TGTAAACAGGAATCAATTAGAGGAAGGATGTGGTGGCTACCGGAAGATAT
AAGTTACGGAGTTTCCTGTCTAACGGTCGATTTCAGACGATAGCGCTTCC
TTGTTAGTTCTTAATTCTTAAGACGTCGGTTAAATAGATTTGAATTGATT
AGTGCAAAGATTATGTGGTATAAGTTGATCAAAATTCTTCAATATTTGTT
GAGTCATACATTCTTCTTTATGCCTGTCCACGAGTTACGTCATCATTAAA
CAACACTTGTTTTCGAAATAATTCTATGTGATAATAACCAATGAGATTTA
GCGAAGTCAGGAGTCGAATCTCATGTGTACTACAGTTTCAGGGTGTCTAC
GGGACCTTGAAAACCTTGAAAACCTTGAAAGTGAATGTAATTTCAGAGAA
TTCCTTGAAAACCTTGAAAAAGCATGATTGTGATTGTATAGTTGTCTTGT
ATTGGCATCTGAAGTTTCGGTCTATGCTAATGCTCTAAAAATTTTCTTGC
TTGCTTCACTCGCAATCATTGTTTCTAAATCAAACGCTGGTAGTCACCTT
TATTGCACCTTGTCAAGACAGTCATATCCTACTATTTAAGTCTATTTTAC
TTCTGAAAAACCTTAAAAAACACTAAAACTTTGCCAAAAGAACCTTGAAA
ACCTTGAAAATGGTGAAAAATAATCCGTAGACACCCTGATAGTTTTGAGC
TATTCAATTTCTACATAAGTTCCGCGACCTACGCTGTTTTCATATACGCG
CTTAGGGGCCACTCACATATCGATGTTTCCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002860TCONS_00002860Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002860-proteinTCONS_00002860-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000023supercontigsc0000023:268608..272838 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06	0.02	0.13	0.12	0.51	0.58	1.14	1.5	0.42	0.59	0.35	0.22	0.13	0.22	0.02	0.02	0.03	0.15	0.04	0	0.2	0.15	0.08	0.03	0.36	0.88	0.03	0.04	0.02	0