XLOC_001458 (gene) - C. hemisphaerica

Overview
NameXLOC_001458
Unique NameXLOC_001458
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000021:586456..592413-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001458 ID=XLOC_001458|Name=XLOC_001458|organism=Clytia hemisphaerica|type=gene|length=5958bp|location=Sequence derived from alignment at sc0000021:586456..592413- (Clytia hemisphaerica)
CATGCATCGATATCAATGAATGTTCGTCAACTAACCAGTGTCACCAGAAT GCAACATGCACCAACAATTTCGGTTCATATTCTTGCAAATGCCATGAAGG GTTTACTGGTGATGGTTTTAAATGTGACAATGTAAATGAATGCCAGCTTG GAAACAATAAATGTCATCCGAATGCTGAATGTGTTGATAATATTGGAGGT TAGTATTGGGCTATTACAGAAATAGTATGTACCCCATATGTTGAGGAGAT GTGACGTCCAGGGTGTTCTGCATGATAAAAAATTCAGGGGGTCTGGCTTT TTCAACTGTAAATATCCAGGGTGGTCAGTAAAACGAGGTCAAAAGTCCAG GGTGGTTAAAAAGAATAAGAAAAAAATCCAACCAGGTCCTAAATTGGGAA AAAATCCAGGGAGGTAAAAAGACCTCCTCAACATAGCGGGTAAAAATTTT TTCTGGAATAGCCAATTCACTCACTCGTTATTCATCTCAAGATTCCTGAT ATTCCTATCGGAAACAACCCAAAAAGTAGAATATGTTGGGTTCTGGAGTA CGTTTTTGTTCTCTTCACTATTTTGGGTGGTTCCAGAAATTTTTAGAATT AGTTGTTTCGTTATTGACCAACAAAATACCGGTATTCGATACTTTAGTAT TGGAGGAGAAGAGAGTTTACATTATATGTATCCACCCTTCTTCACCGGTC GTTATTATGCTACTCTCGGGTGTTAAATGACTTTAATTGGATCAGTATTT CAGTCCTATCCAAAATCTATTTTTTATCATTTTTTAGGTTACAGCTGTAA ATGTCAACAAGGGTTCACAGGGAACGGTGAAATATGCTTCGATAAAAATG AATGTTTAGAATCACCATCCTCTTGTCATCCAAACGCAGAATGTCTCAAT ACAATCGGAAGTTTTAAATGTCAATGCAAATCTGGGTATAAAAGCAATGG AACATTTTGCCAAGATTTAAACGAATGTTTAGATGTGAATCTACACCATT GTTTTTTCGGGAAATGCATCAATACCGTAGGATCGTATACATGTCATTGT TATTCTGGGTTTGAAATGAAAAATGGATTTTGTCAAGGTTAGATATTAGA AAATTCGATGTATCTGACTGAAATGCCTGGAAATCGAGGGCGGTAAGAAT GTAGTATGCCAGGATCTAGACAAATGAAAAACTAAACATCTCTGTCGTTG GAAAAGTACCATACATAAACTCTCTGTTAGCTTACTTGAGAGTGCCGAAG GTTGTTAACTTACATTCGAAACTGCTTATCATCTAACAAAAAAGTTTATT ATGAAAGATTTTTGATACTCATATAGTTTCCAATGCCATCTATTGCCGAA TCCCGGTGAGCAACCTTTTTCTTTTGGAAAGTTCTCATGATGAAGTATTT ATATACTCTTTAGGTATACTCACAGATCTGTAAAGCCCGAAAACCTTTAT CGAAAAGTGAAGCAAGATTTAGTAGGATTTCCTACCGAAGAAATCACGGA ACAACAAGCAATTTCACTGGTTTGAGAGATGTGAAATAGCGTTTGCTGCC TACCTTTTTTGATCTCATGCTCCGAAAAAAATTAAAATGCTAGATCCTAT CCATCGGCACGAAATTTAAAAAGTCAAATTTTTGCTTCACTGCTTTTTTT GCTGGAGAATGCTTAAAGTTGCCTATCTAGCAATTCGGGCTTTACAAATA TAGCCGTTACAGGCGCCACCGGTTGGCGCCGACGGGCGGAATTTTTGGAA GATTAGTCCTTCTAGATCGCCTTAAACAGGTCTGCTGCGGCGCCTGCTCT CACTGTTACGAAGTAATTTAAGAAATGTATCAAATCTGGCTTTTCAAACA CAGCTCAATGTTGAATAGCTTTAAAATTCGTTGTAATAATACCTGACTAT TTTCTTTTCCAGATAAAAATGAATGCGTAACCGGTGAAAGCAAATGTCAT CAAAACGCAACCTGTGTAAACGCGTTTGGTTCTTACAAGTGTTTCTGTGA TTCTGGTTTCCATGGTGATGGTATTCAATGCAAACTTGTCAAAAGTAGTA CTGTTGCTTGGAGCCTGATTGCAGATTTTATTGACGAACATGTCAAGAAG ATGTTTGAACAACAAGAGCAAAAACTACGAACAGAAGAACAAGAACAAAT AGAGGATCTGTTAAGAACCATTCAGAATCGCTCTGTTGCAGGTGAGTTGG ACTACAAACACATCTCAGACGAACTTTGTGGGACTAAAATCTCACATTCG CAATAAACATACATTTTTTCTTTATGAGCATTGCACTTATAAGCATATCC AGGTTAGATATGGCAAATTTTGGGAATTTGAGTTTCATTGTTTTCTAGCC AAAAAGTTCAGTGGGGATGGAAAAAATAGCACAACATTCTGCAGTGAGGA TTTGCTTACCTGATTATTTTCAGCGGGGACAAATTTTTTAGCATAATTGA CCAATTTTTCCGGTGGGCAGGGGCCCCAGTGGGTCTGTGAGAAGGGGTGT GATAAGGATAACTTAATAATGTTTTTACTGTAATTGTTTGAGAAAAATGT CTCTCCTTTAAAGCAGTCGAATAAGAACTCTGGGATGGTGCAGTGCCCAT GCAGTGAGAAAGCAATATTTCCCATTTCCTTTAAAATTGACATTGTGAGA ATTTTAATAACCAAGACGTAAACAAAATACTTTTATGTTGTGTGCCATGC TAACATGCATCTGGTTTGTCAATTGTTTCTTCTGTTTTGTTAATCATAAA CAAAATCAGTAAAAAACACATATTTCTGATGGACAAATAGCTTGTTTGTT CTCACCTTTCTCACACCCATTACATACCCGTCACAAGGCTAACAAAGAAT GCTTTGTGATTTACACGTTTTTTTATAAGAACATCCAAAATTTTTGAAGC CTTGAGATGTTCTCAACTTTTAGAGTTTTAAGCCTAAAAATGTTCTTAAC ATGTTCTTATTTTCGCCATTTTAAGAGTACTTTTGTCCATTTTCCTATGA ACTCGGTGTTCGCAAAGCCTTAAAGTGTTCTTAACTTGTTCTTAAGATTT TGGCTGTCGAAGCCTTGTGTTCTTATATAGTTTGTTCTTATTAAAAAAAT TTGTTTAACCCTAATTATCAAACTGATCAGAAGAGCCAAGAGATGCAAAA GAATCTGCACCGGCAATCCCCTATTAGTATTACTTTCCAAAGATTTTTCT ACACACGACTATAACCTTTTTCAAAGATTTTATGGAAACGTTTCTGTTAC CACCATTTAGACCTAAGCTAAAGTGTCCAATTTAAATAAAACACTTACAC ATATCCCTAGTTCTACTTTGCAGTCAAAATAGTTCCCGTATTTTTCGTGA TACCATTGAGTCTTAAACCGAAGGCTAGAGACGATAATCTCCAACCCTCC CAAAAAGAAAAACTGTACGCTTAAGATTTGCGCCGTGTATTTCGGATAAC GGATTGAATTTAGCACTTTCTTTTTTCACGCTTTACATCTTTCAAATGTT GGAGGTAAACAGCATTTACCGCCCAGCTATTTTCAATCCACTGTTTGTAT GAAAACCACACGGGCGTGCGCAAATTATAAAGGAAATAAGTGGCTTCAAA TCCTACAAAGGAGATTCGGCTCTAGCCTTCGGATAACTTATTGGGTGGTA TAGGCTAGCTTAAGCCTTCTTTTTCTTGATTTCTTTGCGGGATGTAAAAT TTTCACAAATATTAAAATATACCAAAGATTTTACTTTTATTTTCATCAGC TACTCAAAGATGTGCAGCATGTCACCAGAACGCTACCTGCTCCATAGACA AAGAAACATATGAAACAAAATGTGTTTGTAGTATTGGATTCATTGGCAAT GGTTCATATTGTTCACCAGAACTGGTTACAAGTTCTAAGTATCCTATGAA GACAACTGAAACAGTCGATTCTGAAAAAGATGGTATTTCCATAGACGTAC AAAATGAATTAAATATTGATCCTCCTAAAGGGAAACAAATTACCGGAAAG TTAAAAGGTTTGTATCCTCCACTAGTCATTGAAAATCGTCTGCAAGAATT TTCCTTAGTAGCATAGTTACCCAGTAAATGAATTTCGAATTCCTTTTCCG CAGGGGATATCTTTGCCCGGTTGGCGTTGATTTTTCCGTCTTAAATTTAC GGTCATGTCAATATCAATAATTCATTCTCAACTTCAGTTGAGCTAGAATC TACTGACAATGTGTGTCCATGTGTTTGTCAGTCTGTCACAAAACTTTAAG GCAGCCGGCGGACTTCAAAATGGTCGGATTTGGATCACTTGTTCCTTGGA TGAATATATTTTTGCATTTTTCAAAAATTTTGATTTTTGGGTTCTGGGTG GGCACTACCTTTTTGCTGCAATTGGGTCTATTAATAATTTGAATAAAAAT CAATGCATTGAATGTTCACTGTGGCATAGAACTCAGAATTTTCTGGAGCT AGCTAATTTGTTATTTTTTGGTCAAGTAAGGTACAAACAAAACTCATGTA TGCACCTCAACCCTGAAATTATGAAGGAGACTTTCATTGCATTGATGATT TTACATAGACAAAGGCATTTTTCTGTCATTCCTCTCTGTAAACTCGACCC AGTTGAGATCGATAACAGGTGTTATAGCTCTAGTAGACAGCTGGCCTATT CTGTTGTCTAGTCTAACTGTTAGAGCAGGCAAAAAATGGGCAGAAATTTG GCAATTAAAATATTTTCTTTGACATAAAAATAGAGCAATACATTTTTTGA GACTGCCCACTTTTTGGCCATTTTAATTTATAAAGATAAGTGGACCTGAA ATCTTTATTGTTTTTCACAGGTAACGAATCAAGTGGTTCAGCAATGGGAG TAACATCATTCATCATGGCATTATTTGCTTTAATGCTTGTTTTCACTTTG ATATGCTTTATCCACAAGAAATTCGGTCTCAAATGTCACAAAAGATCCAG TAAAGTTGATCCAAAGATGAGGAAACCAACCGGTGGTCGATTCAGGAGTT TAACATCGATGTTTAATGGTCATTTTAACCGTAAACCATCGACAGCTTCA GTCAATTATAAAACGGAAGATATGTTTGACATTCTGAAACATCGTTTCTC TCTTTATGATGAAGAAGCAATCAGAAATCATCAATTTCCAAGAGCACAAA ATACTACTAGTTGATCGTACAGATTTCTGTAAAGTCCGAAGGGCTAGATG TCGCGCTAGATTTCAGCTCTTACAAGCAAAAAATAAAATTAATATCGCAA AAAATATTGCTGCTATTGTTTTCGAAAATCTGCGAAGCTTTTATTAGTCA AGTACTGAAATTCTATTGTATTATCACGTGACCTAGGTAGGATTTCCTAC CTAACCTCGGCACACTTTTCAGCTAAAGTTTGACATCTAGCCCTTCGGGC TTTATTAATCTGTGGTTGATCGTCTCTTCTTAGCTGGCAAACAGCATACC TTTATCGTCTATACTTAACATTGATACGATGATACGATGTGAATGGTTTT CGACATCTTGATCATGGGACTTTTTTCGGACATACTCCCACGTTGATTCC ATTATGAACTGATTTGTAGCCGGACTAGGGATTGTCGGACTAGTATAGTG TATACTTGGTTTTCGTATCGCTTTTGCTGTAAATATCACCAACCGAGCTT TCGGAGCTGTCTTATCGGACATGAAAGCAGCTTTACTCTGATCTCTGATC CCTCACCAACCTAGGTGCATTCTGTTTAAACTTCACACGAACAACATTTT TCTATAGATGCCTACTTTTTTAATCCCCTGTCTCACAGCCCCGGTAAAAC TTTTTCCCACAGCGGGGATGAAATTTTCCATTGTAATCCCATTTGGGATA GAGATTTTATTGTTCCAAGCTTAAAAAATCCAGTGGGGATGGTTTTGGAG TACAAGTTTTTACAATGGAGTTTGAATGGGGATGTAATCAAAGTCAATTT CCTAGTGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002699TCONS_00002699Clytia hemisphaericatranscript
TCONS_00002698TCONS_00002698Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002699-proteinTCONS_00002699-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000021supercontigsc0000021:586456..592413 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.09 0.06 0.07 0.07 3.78 2.51 92.22 98.93 77.15 118 37.63 84.48 0.29 0.22 0.2 0.27 0.59 0.41 0.25 0.13 0.2 0.54 0.17 0.12 0.28 0.42 0.24 0.09 1.05 0.87