XLOC_001441 (gene) - C. hemisphaerica

Overview
NameXLOC_001441
Unique NameXLOC_001441
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000021:144767..149996-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001441 ID=XLOC_001441|Name=XLOC_001441|organism=Clytia hemisphaerica|type=gene|length=5230bp|location=Sequence derived from alignment at sc0000021:144767..149996- (Clytia hemisphaerica)
AGATAATATCGGCTTAGCATATGCAAGGTGGTCGACAAAGTGAATATTTT TTTTGCCAATAAATTTTAGAACACGGAAAGACAATAACAAAAAAGTAAAG GATAAATTAATTTTTAGAATCGCAACAAAGTTTTTTGCAGCAATTATTAN AAGTAAAGGATAAATTTAATTTTTAGAATCGCAACAAAGTTTTTGCAGCA ATTATTAATCAATTTTAATTTTCCATTCACAACCACATCACGAAGGATGA ATCGCCAGATTTTGATATTTTTGACACTGGTGACATGTGTTGTTCTGGTG AAGTCACGGTCATCGAGGTTTGGCGCCAAAAAGCGCGAATGGCCGGTAAG CCATATTGTTTGAAACGCTCCTGTCTAAGTGTCCAAGTAGGTGGGAAACA AACTGTACTGTCTAGATTGGGTCTTTTTTCTGCCTAGGGGCCGTCCACAT AGTACGTACGCACTAATAGTTCTCAAAAGCGTATGTTTGCGTACAGGGGG AGGGGAGGGGTCAAAGGAAAATGTACGTATGCAGATTTTATAACGTCAAA ATCAGTTTTTGACCGATATCTTCAGATTGACTTAATGTAAATTTTTGACC CAGCACTTTTCGAAATCCTCTCGTTGATACGATTGTTTTGAGCTATATAT GAGAGTTAAGGAATAATGGGAAGCGGTGCGCGCCACGCAAAATATATTTG GGACATGCCTTAACTCACCCGAGCATTTGCGTACGCTTGCGTACAGGGGG GAGGGGGTACTCGATTTTCGACATTTTAGTGCGTACGTACTATGTGGACG GCCCCCTATGTTAAATTGGCTATTTTCATCAGTCTTTACAGTCCATATAG CTTTAGCAATAGCAAGATATCTCATTTTTGGATAGGAATTATTTTGTTTG GTAATGAAAGGTGTAATTTTGAACCGTGTTTAATTATTTAAGGCTTAGTT TTTTCCCTATTCAATTTGAAATGAAACAAGCGATGTAATAGGAATAACAC AGTACTTTGAAAAAACAATTCTTGCAATTCAGCTTTTGCTTGATATATCA GAGCTATGGATAGAGCGATATAACACCCCTGTGTCACAGACCCACTGGGA GACAAAGCCCCACCGAAAAATTTGGCAGAAATTTCGTCCCCGGTGGGAAA ACACTCTGGAATTTCAGCTCCACTGGGAAAATGACTTTGATTTCATCGCC ATTCGAAATTCAATGTTTAAAAATTGCACTCCAAAAGCGTCCCCGCTGGA TTTTTTAATAGGAACAATAGAATTTTTTTAACCCCATCGGAATTTCAATA GGAAAAATAGTTTCACAAGGGCTGTGAGACAGGGGTGTAATATCCCATAG TTGATAGTTGTTAATTTTCCGATGTGATAGGCCAATACATATCATAGTGA AAGTTATTTAGTCAATATGAATAGTAAGACTGGGATATTAGAATTTACCG TTGTCAACATAAAATTAGGTGTCTTTATCCCTTTTTCAGTGAGTTTGGAT TCAACCTGGTTAGATATTCAAATCAGAGTTTGATTAGTAGCTATCAGCAC ATAGCGAACACTTTTATTTAATTTCAAATAATCACCTCCAGCAGTGCATC GGAATAATTAATTTAGTTTTAAATTTAAATATATTAATAATCATCAATAA TTTAGCTGCTTTTATATATCCTATCAAAATCAAAATCAGACCTCAAATCA AACTCTAGAAATATATACTAATATTTTAAGCCTTTTGATCACATCGGCGG GGTACTGTCTCCTTGGTTCCCTCGGATTATTCGATTGTGTCATGACCAAA ATTTATTTATTTAAAGTTTTTAATGGTTTAATAAAACGGTTAAATACATC AATAAAATATTCAAATTTTGGTGGTCTTTCCATTCTCAAGTATAAAATTG TTCTCTGGATTTATCTTTTTGCTGACTTTAGATAAGATAATTCATAAAAT ATATAAAACATGCTCTCCCAGAAAAACATAATTTGGTTCATTAATATCGC GATTTAAAACTAACTGCCAAAATCCAAATGAAAGCAGGTCTAAACGTCAA AAAAATTCTCTTACACCGTGTGAAAAAATACATATCCGAAATCTTTATAA CACCCCTTTCTTCACAGAACCAAATAGGATTTTTTTCAGCCATTAGGGAT ATAAGAATATGTACTAGTTATTGCATGACTTCGAGTGCATTTTTCCGTAA TTTTTCTCGGTAAAATCTCGGAACAAGTAAAATATCGAGTATTGCACGAG AAGTCCACAAAGCCTTAGGGCTCTGACCATAGTCAGAAAACAGAAAATTG ATTTTAGTATCTGAACATAAAAGTTATGTTTTAAATTCTTTAACACTTTT AACAAAGAATTGCCTTTATAAATTGCTTTTTAATCAAACNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNTTATGTTGCATCACCTTCTTTTATAAAAA GTGCTAAGTTTTAATGGGTAATTAACCTTTTTGTTTCGAACTTTTTTCAA ACTGTCCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCTAAA AAGATGTGTCAAAAGTTATGACTGTTTTTTTAAGCAAAATCCAGATGCAA AATTGATGAAAAACCACTATTTTGAAGATTTTGAGACAAAGAAGCATTTA CAAAAATTTCCGCAAAAATTTTTATTGTTCGGTAAAAGATACACCATCTA CTGCGAAAAAATTTTCAAAATGTTTTATCTTAGCCGAAACTAAGCTCTTC AAAGTTGAAATACTCTCGCAAAAGTCTTCATTTTCTTCTTCATCAAATTT TTTCAATGCAATTTTTGAGTTTTCAGATTCAGGAATAGTTTGTCTAACAG AAAATGTATAACATGCCATAGTTGTATTGGTTACATCAGTCAGAAAATTT TAAACACGGCAATTATGAAAAATTCACTATGGTCAGAGCCCTTAAGTTAA CATGTTAACATGTTCTTAACTTGTTCTTAATATTTAATATTTTGTTGCAT TACTTAGGATAGAAACATGTATTCCACTTTTTTTCTTTCAGATCAAATTA TGTACAGCAGATGAAGACTGTGAAGGAGGGTGTTGCAAAGGATTGTTTTG TTTTCGATATCTCACTGAAGACGAACGCTGTCTCTTTGGGGTAAGTTGGA CCTAATCCAATAAAATTAGGTTTTTTTGAAAAAATAATATATAGCAAGCT GGAATTTTGTCCAGCTTTTTGTTGCCTTGGAAACAAAACAAATCCTATCA ATCTTTATTTGTATTTCAGCATCATTTGAAAGTTGGGTGTGGTTGTGAAG CCGGGTTATCATGCGAACGAAAGAAATTTTCCTACTCCTGTCAAAAACCT GAAGATGAAGACGAAAGTGAAGATAATTTCAACCGAGAATTGGAGGAAAT TTTAATGAGAGCTGAAACACGACGTGCTGTGGCGGATGAAGGTGAAAATG CTGACAATGCAAGTATTGACAATGAAACAAAGAGAAATGTATCACAATTT TAAGAAGTCATAATATCATGAATTATGAAGGCTCAAATGTTTTCATTATC CTGCCTAAAAAAACCGGTCCAATTGTTTCACAAATTGCAGTTCACAAGTT CTTACTTTTAAGATTCTAAAGTTTATTGTAAAAAGCTTTGTAAATTCATT CTTGTAAGTCTTCTCAAAACCAATACTACTTAACCTACCTACCTACCTAC CTACCTACCTAGGTCGGGCGCCAGTAGCTCATACCCAATGAATTCCTCTT TTCTAGCTATATAATTATATAGAACTTTAAAATCAAAATCCTTTGGTGAT CGACCTAAAACATTTTTTGACTTGTAATCAGGCCCGGCGGAACAGCCGTT AAAGTGGGGAGGCTGAAGGCTCAAAATGAGATAAAATTCGCTAGGAATTT GAGAAAAAAATTTGCTCATTTGCTCAAAAGTAGGGACGCTGAAGTCTTCC CAATCTCCCCGCTTCCGCCGGGCCTGCTTGTACTGTAGTACAAAAATTGA AGTAACTGTATGAATTTTTTTTTAGTATGATCAACGAAGCAAAGGATTTA ATTTCTTTTCGTTAAAAAATCATGATAGATGTAGAATACAAACTAATATA TTTTTGATTTAAAAAAATCCCTTTATATCATTGGGATGAACGGAGAGATA AATTCGCTGAATCTCAATTTGCTTAAAATTTACTCTTTCAATTTTTTATT TTCCAGTGTCAATGTGATTAAGGGATTTTAAAGGTTTTATTTTTACATCA GTCAGTAAGTGTTCCCATTTCATATCAGAGACATATTTCATATCAGGACA GTGTCTGTCTATTGTTATATTGTGTTGATATAAGCAAAAAAATGTTTTTC TTTTCCTCTTTTTGACCAATCTTGCTGCACATATGTGTCAATTAAATATC AAAAAGCGTTTAAATTAAATTTGATGAGTAAGCAAACGATATCAGTTTTA TTTAAAAACAAAACCTTTAAAAACAAAACTTTTAAATGATTTGACGTAAA AGTTGGGTAAAATTTTCAATGTTTCAATTTAATGTGATGGGCTAACTGTT TTAAATTAGTTTATTTTGTTGTCAGAACAGTTGTGTTATGGGTACAGTGG ATAGTCTCTTTAACTTGAACAAGTTTTCTGGTCCCTTCAGTTAACAATGC CTATAAACCTTACTCTATAGCTCGAAATTTCCATAATTCGAACACATTTG TGTTCCCCGTGCGTGTTCGATTTATAGAAACTCCACTGTATTATCCATAG ATTTAAATTCAAAATTTGTGATTTTAAGAAGATTAATATTGATTATTTCA AAAATCGACCATACTGATTGTAACTTCGAGTAAAATATAGTTTACACACG TTGATTTTGGACTGCGACACAATATTGAACAATTTTACATTTTTTTGCTC AAGATGTTGATACGACCTTTACCAAATACGTTTTCCAGAAGATGAACGCG CATAAACTATTTAATGTTTAATTTATGTAAATTCTTTTAAGTTTATTTAT CAAGTTGAAGAAAAAAATAAAACAGTTGGGAATTTGAAAACTTTGTTATT TTTTAATTTTTTGTCGAAGTGAAATTTCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002660TCONS_00002660Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002660-proteinTCONS_00002660-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000021supercontigsc0000021:144767..149996 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.09 0.19 0.22 0.24 0.19 0.23 27.58 29.95 58.57 35.84 44.17 74.88 9.9 8.53 0.06 0.09 10.04 12.37 18.16 19.45 37.9 37.41 12.45 18.31 16.38 16.31 37.76 39.08 0.35 0.4