XLOC_001421 (gene) - C. hemisphaerica

Overview
NameXLOC_001421
Unique NameXLOC_001421
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000021:533124..542338+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001421 ID=XLOC_001421|Name=XLOC_001421|organism=Clytia hemisphaerica|type=gene|length=9215bp|location=Sequence derived from alignment at sc0000021:533124..542338+ (Clytia hemisphaerica)
CATTATTcgaatgaatgaaaaaagtcGCAAAAATGGATTAAAAAATTCTG ACCGCATTGACAATGatatttattgacaattgattTATTACTTGATATTG ACtaattattgataacaaataTTGACCTGACGAAGAATGAAGAATACTGT TTTGATTTCGATTTtattagttttagtttttgacaTTGGAAGTACATCCC CTTTACCTTCCTATAAAAGAGGTAAGAGTTCTTCTCCAGTTATCTCtcca cccctgtctcaatgaccAATGCCAGTAGCGTGCTGGGTTGGTCAAAACTA AAGAGGCAATTTTCGAAAGTTGGGGTTTTGGCGCCCCCTATTAATAAAAC TATGTTTTTCTAAATTACGCGAGCGAAGCTATGACAAGAAATTTAGAGTA TTTCTTCTCTTTTTGGTTGAAAACCGCTAATTCTAAAGTGTAACAACGCG AAGGAGCTCCAAAACTATTATTCAGAGGCACCTTTTTGTACCTCTTGTCT TTCACCCCTCCCCCCCAAAAAAGTCGGCCgctaaggggggggggcaattg CTTAATGTAGatgtaaaataattttcacaAACCAATGCTAAACTAACGAC ATGGCCATGAAATATGATATCGAAATATTAATCCTCTCTTTCAGAATTTT ACAATCCACATAGCATCACAGTATGTCGAGGACAGATGAGATCTATCGCT TGTCCCAATCTTGAACTCATCCATATTTTCAACGCGTTTTATGGTAAACT AAACGGTCATGACTGCAACACAGCCGTTACCAACCGCCGAGATGATATCC CGACCTGCATAACCAAGAACTCGCCAAACTTGATCAAAGAGACGTGTCAC GGCCAGCAATCGTGCGACTTATACGCGGAAGACGCTCTTTATGATAACCC GTGTCCCAGCGTCGAAAAATACCTTTACGTTTCTTTTACATGTCAAGGCA AATCACAACTCAATACTAAGCTGCAGGATatgtcaaaacaaaacaatata gTTAATTCATTCTTTGATGCACCTACGACTGGACCTCAACAGCCATTACC GTCGTTGGCAAAACCGGGACTCACTCAACAAAGACAAGGTAAGGCGAACT TACATTTTATTTAGAAACATTGACGAAAATTTCAATAACAGAAATTGTCG TCTATGTCTTTCTTATTTTCGCCCAAGTCTGAATTATTCTACAGAAAGGT GATCTGATAAGCAATTTGTCGACTATTAATAAAATTCTAAAACCAAAGAA AACACTCATATTTTCAGCAGTATATCGCCCAAAATAAAGTTATTTTACAC ATTTACAGTCGAAAAAGtcacaaatttttcaaaatttatcaccAAAGCCA GTTATATCTTAAAAATTATCTCAAAAATCCACTCAACAGAAACTTTTCCT GTGCTCTGCACTAAAactaagattttcaaaatatctctTTATGGAGGAAC TTTTTGACTTATTATGTATATCTCTAATAGATTAAAATAATGTTATTAGC CACGTCAATCTGCTCACTATGACAAAACACTTagtgtttcaaaaataaat aatttcaaaataaacactCCACAAATTATTTGGGGAGGAGCAGAGCAAtt tccaaaacaaaacattccaaTTTAGCTTCAAATACATAAGTATATAAGGA TTTCAGGCTGAAACCAGACAAAAATCAACCAGTGATAGTGACATTTTTGT CAACCTcatccccgtgtatcccaggctttatctATGATACTGatagacgc cagagaatattatctggcgctatcagtaagcattaAAAAGCCGATAATAC ACAGGGAAGGAGGCTGATTACATGTTTAATCCGTTTAAAATCTCTTAACT GAAATCAAAAACATTAAGTTTGATAAATTGGTTAATATTAACAGGAAGTG AACTACCTATCATTGGTATTTAAGTCATGCTTTACAcgctttgtttttat aagaatatactttataaaaatatccatgatgaaattggaaaaaaaattaa gaatatgctaaagAATAACACCATCATGGATTTTGGCAACTAAACCTAAG AATGCAATTTCATAGAGCATTTTACttgtaaattgccaattatcttCCAG CAGTGCTTAAaaattgggacaagctggagtttttataagctcttatttga tttggttggtcgttaaccagtaataaaacaattttgttactttttctaaa gaacgcgtcatctttattacttcaaatgaccaattagtgaagtatcttat aaaaccTCCAGCTCATCCCTAAAAATTCCCCAAAAATACCATATCTTTGC TCGAGGTCTGTATTACATGCTAGGTTTAGGCTGGGTTTGATCCTAACCTT AGAATGTACCATAAGAATATTCTATTATCAAGAAAAGTTATCTTTCAATc cataaaacaaaattttatattttttagttttgtttgaCGGATTGAAAGCC CGattgaaagataacttttacTCTCTGGTTACCCATCGAGCACTCTGACG ATTTGTCTAACcttgattaaaaatattttaggatgatttttcccaaatag ttaagaatattcatcatgaaataaaaaaaaaacaccattcttataaaaaa agcgtgtgttACCTATTGCAGCTTTGCTATTTTGATCATTACTTTTTATG TAGCTTTCCAGTCGATTTTCCGGTGACCTGATGTGttaaatacaaattta aatcGATTATCGTAGCGTCTATAGTTGGTTGGTACAAGtatagaaaaatc aatttcgTTTCATAAAATGTTAAGTCTTAATTTGTCCTAGCAATTATAAC ACCCAGTATAATTTTAGCATCTTATCTCttcattttcattaatttttcta agtactctaaggtcccgaataaacTTCTCACCAgtaattaatttttgaag atttctcgGAATCCCCTTTCTTATTAAGACCACGCCCcctattatttatt tttgaaaatattttcagctatcaaAATCTGAATTACTGTATGTAAAAAGC AATATGTAATTATCCTATTATGGGGTTTTTAGAGATACAATTTCCGATCT CCCCCAGAATTAGGTCCCCCTGTGTGTTATATTCCTTTTATTTGCCTTCC TACTATCCGGGACCTTAGAGTACTCCAGAGCCTCAAATTGACGATATTGA CTCTCGTTTTTAACATTTAGTGTTTATAAAAAATAGGTTTTCGAACTTTT AACGTCCGCTAAAACACTTCCAACAAAATGAAATTGCATAATGCGGGTCA AACTTAATAACACTTTAGACTAGTCTGTTGTTTAGAAATCCCCTGcctca tttatttttcaaaaaaagcttccAATTCGAAGACCCATATATTGAGGTCC GTACGATCTTCAAATATAGCAAActaacattttttcattttatcaaataa atccAACTTTTATAACGGTTCAATATTTTTCTAGGGATAGCAGTCTTCTG AATGAAAGTGAATAAAATCACTGTGTTGTCGAATATTGGTCATAAGTTTT ATAATGTTAAGGTTAATTTAAAGTCTCTTTCACCAAGGCTTATTTTACAG TGTATTCAATATCAAGTGAAACTCTAGCTATCTGAGGAATTATTGATCTG ACCTCAAAGGATAAAGGccagtctccactttcgcgcgacatgagcaatta actttttgacgttttttgtaaggtcattggtcggttaaaaaatgaagcaa aaaaaattgaaaaaagtagaatttccttcaactttttttttgttcacgcg aaacttttttatgacgtaatctttttttcaggcaaaaaaggttaggaaaa aaactgtcgcccatttctcGCAAAAGTGGAGACCAACCTTAAtgagtcat aaaatttgatatttttccttgcaattttgttttttgtaactttttctttt gtcttcaCAGAAATGACACCTTCCCCGATTAATCTTAAAACCGAATACAT TTGCACCGGACAATCACGAAACATTTTCTGTCCAGAACTACAATTACTGA AAATCAAGACCGCATTTTACGGTAAACAAAAATACCGAGATTGCTCCGGT CAATATATCAGCCGAGATCAAGCACAAACATGTTATTCGCCGGACGCTTT CAACTCTATCAAAGGCATGTGTGAAGGACAGCAGTCATGTGACCTCATAG CAGACCCAGACCTCTATGGCAAATCCACGTGTTCATCCTGGCAGCCTCAA TACTTGAAGGTTTCTTACTTGTGCGGTGGCAAATCTGACTTGACACAAAA ATTACGGAATATGAATCAGATAGGTAAGTCATTGACTACTCAGGGTCTTA ATCAGGATTTGATCTTTTCTTAATCACGAATAGGTCCGTGAGTTTCGAat ctaggtttgcgaggtgacaggtatgtccgagccaaaaatcaaaaatggtc ccttagagagaggaaaaattggcatttttgggaTCCTAAAagagagactt ttctcaaaaatgttaTCAATTTTCACTTgaattttgtacaaattttggaa aatcaagaCCCTTTTGTTCGGCTAAAGCTTCAGATGCATCCAGctggact tagaatttttttcaagttgaataGTGACCAAAAGGGATCTCGAACCGGGA ACCTATAGGTTCCGAAACCAATACCCTATCCACTAGGCCAAACCGGCTGC CGAAAATTCGTTATTTAGGGTTACTTATACGAAGGTCTTAGTACTATATA GTAATAAGTCtgactgacgagttaggctaactgttatgatcGCCATTACT CCGAAGAAGCCACCACACGTGTGCACCGCCGGGTGGGTGCACCGCCGGCC GGGTGAGGGGTTAGGGATGTGCACCAAGGTGACTTCACTTCAAATATCGC AAATAATACCGAAAACTaaagaaaatcatttcatttttggatagaTATGA AGGAATAATAGGCtaataaaaagtaaatttgGCTGGCGAATGTTTTATGT GCCTTCTTTCTAATATTGATAGTCATAATTATACTACAGAAAAAAAATGG AGACATTATTTggtttgtttagaaaaaaatgaaactagACATTGAAATTT ATTCTAATGGGAGCTACCAAATCGATCGTTAATACCTTAAACGCTACCAT TTTCAATTTAGCATGAATAAATTGATAAGGAAAGCTAACGTTTTATATAA AGAAATGCTCAAAATATAATCATTTATTTGCGAGTTGTATCAAAAATATT AATATTGAATCAGTTTTGAGCGTGCGAAAATCGAATGTCTGTAAAATCGA AGCTCATCTtctgcatttttttttttgcttcgaaTGTTTCTGAAACATTT AGTTTGAGGTGTGCTGAGAGAAATTAGTGCGGCTTCAAGATAAAActgaa agaagatttttttgaatgttCGCGAAACAAAATGGCGTGTGGTTGTAGAT TATTGCTGATTTCAACAATCGTAATTCTTGCAGAATGGTGCAAAGCTTTC CCAGgttatttgaaagattttttctgaGCCTATTAAAAAGAGTGCTTCAT CTTGTTAGCTAGACCGAAGGATAGAGAGAGCTCAAAGCTATAGGATCTCT TTTTATAATCCTGTCTCAGTGAACAGAATTTGCAATCTTATCGGCAATCT TATTTTAATTGTATTTCCAGATAGAACTCTACAGATCTATGATGCAGATA TGTCTTACGAAATGTTGACTGGATCAGTAATCAGTTTAAGTTTTTATCGA TTAAGGGCTTGCCAAAaccaatattttattttatattttataaccAGTAA TTTTTTTCGACCtctaatcttttcaaaaatatttcagccTCGAGATTCAT TGGAACACCAAATAATCAAAACTATGTTCGATCACAATTCCCTAGAATGC CTTCAGAAGACAAATATTACAACAATTGGAAAAAATGGGCAAATTCTGAA GAAATAACACAATGGCAGCGTTCAGCCGTACCATACGGAGGACAAATGGA AGACACCAAAAGATTCTCCNTGGCAGCGTTCAGCCGTACCATACGGAGGA CAAATGGAAGACACTAAAAGATTCTCCATGCAAATACCGTTAAATGATTT AAGAACTTTATACGGCTCGTATGATTTAGTACAAGCTGCAGAAAAAAAAG CAGCTATTGTTCAGCCAATATATCAAGGTCAATCTCCATTACAAGCATAC ATTCAACAGCCTTCATATCCAAGTGTGATGACATTCATACCGAATATGGC ATTCCAAAAAGCTGACCAAAGAGGTGATATCATTCAACCAGAGATTCGAC AACAGTTATCACTACCTCCACCTAATATCCCTTACGATCCAACCGTTTTG GGAATACCACAGAATCCAACTCAATCTTGCCAAGGATGCAATGGTGATTG CAGTAATTACCTTTGTTATGGATGTGGTGGTTGTCCAGCTGATGGAACAC AGAAACCACATTATATGTATCCCTACCAAAAACAGGATTCAGGTAATTCT GAGGTCATGTTCGCACGTAATGGTTCCGTTTGATCCGTAACTAAAtgagc cattctattggttagaagtggcgtaaaacttgaatgtaaccaatagaatg gcttcatttcgtttcggatgAAAGGGAACCGTAGCGTGTGAGCGTGgtct aaatttcaattttcaatctcTTACCCAGAGCCATTTTTGCCAAAATAGGA TTTTACTGGTGAAGGTGTTACAGCCTTTCGTGGGTGCCGTCAAGATTTTT GGCTTTTGCTTAGTCAGTCTATGTTCTTTTTGTCTGTTATAGTAAAAATC CGCTTTTATCACTAACTTATTTACTAGTTCTcagttattttttttatttt tttccaggcTATCATGATGCTTTTGAAAGTCATGCAATGGATTTATCTGG ACTAATCATATCTCCAGTTCCTCCATTACCGAAACGTATGCAACCAAAAG GTATTTATTATGATAGAAATTAAGGTTTTAGGATAGGATAGGTTTTTCGA ATTGCGCATATCGGTAAATTATTTGCCACATTCATTGCATTTAATCCAAA AACACTAATCTTTTTTGCAGTGACTCATTCATCCTCTCGGTAAAGCATTT ACCACGCCCAttacattaactctaaaaccaCCTCTACCTTTTTTGCATTG GCTCGTTCATTCGTCTTCTCAAAATATTTACCACACACATTACACATTAC ATTCGAATTAGGATTGACCCTCTAGTATTTTTTTAGTTCATTATCCTCTA GCTAAAGCATTTACCACATCCATAACATTCGATTTAAGATTACCCTCTAG ATCTTTTCGTGTTGTTTCATCATCCTGATCATCAAAGTATTTGCCACACC TTTacatttaatttaaaaaataacctGTAGTTTATGCATTGACTCGTTCG TCCTCTCATCAAAGCATTTACCAAACACTTTGCATTCGATTTGAGATAAC CCTCTAGATATTTTTTGTATTGGTTCATCATCCTTTAAGCAAAGCATTTA CCACGTACAatacattttctttgagattaCACTCTAGTTTTTTTGTATTG TGTTCATCAAGGTATCTACCACAGCCATTATATTCGATCTAAGATAACTA ACATAGGcgaagcgagataccctgcaaaatttatgagggagtgcagacgt ttatgacatattcattatcttttgataaaacaaagacaataattacagtg tcgtaaaaaccacTCTCATCCATagattttgcagggtatctcgctaagCC TATGGGTAGCCTCCTACCTATTTCGCAATGACTCGTTCATCCTCTCATCA AAGCATTTACCACACACATTAGATTCGATTTGAGATTACCCTTTAGCTGT TTCTATGTTCGTTTATTCTCCTTCACAAAACATTTACCACACACATGCGT TTTTACATTCGATTTGAGATTACCCTCTCGCTTTCGGTTTGTCGCTCTGG TCTTTTCTTctatttcaacaatttttctaTTCGAGCTTTCAGGATCGGTT CTATTTGAAACCTACCTTAATGGATACTGTAGATTCGTTAGGGTGAAGCA CTTACCATGAACATTacatttaaattgaaaaattttgcatCATCTTGTAA ATAATTGTAAAACTGAAGCATCTGTTATTTAAGATGAATTTTGCATCACT TGTAAAATATTTCAACACGTCGTGTAAAGATTTTCACCTCTAAGAATCAG TTAGATTGAAAGTTTGACATCTAACACATACGATAAATTcactatacacg ttttttttataagaacatccaaaattttggaagccTTCGTCAGAtttaac attttgagttttaagcttaaaaatgttctcagcATGTccttattttgatc attttgtgaatatttttgtccattttcctaagaagaagggtgtttttgag accacaaagccttaaaatgttcttaacttgtttttaacattttggccatc gaagcattatgttcttatataaaaagtatatgcaaaaaaaaagaaacctt tAAAAATCCTTTCTCCATTGTAAAGAGGAACTTATCTTAAATCAGTTAAG TTAAAACCCTTCTAATTCCACCGTATTTTTTTCCCTTTCACAGGCAAACC ACGACCAGGGAAATCGAACACTCCTGAAGATGATGACGATAATGATGATG ATAACGATGACGATGAggacgaaaacgaaagtgaaagtgactcCGACGAT AACGACAATGACGATGACGACACAGTCGATGATGAGTCGGCTGCCGATAA TgtaactgaaaatcaaacaatgaaCAATTCCTCTTCttcaaaattgaaga aaatgaagaaaacaaatAAATCGAAACAAAGACATAAAAAAAAGAACCGC TAGTTTGTTATAGGAATTGAAATCTAGATTAATATTAGATCTTCTTCAAA GTAGCACGGTGGTATGAGGTGGAACCCCAAGGCGATACTCTAATTACTTT AATGTTGTCCACACAATGTTCAAGCTACAAATTGGTGAAAGCTCCAAGAA TGGTAACACACAAAACTTTATACAATTTTTGACAACCGTTGTTTTTCTGA CAACCGATGCTTCAAATTACCTTAGAGAAGATTCATACGAAACTATAGTA ACTAACTAGGACACTTGAAGATTGATTGAGTGAGTatgttttgtagaaat aatATCAGAAGTAAAAAcccttttaaaatattttaaaaagtattatttGA AAAGGTATAACGAAATGTACAGTTATAATTTATggacaaagaaaatttaa aaatctgtgAAAGTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002629TCONS_00002629Clytia hemisphaericatranscript
TCONS_00002630TCONS_00002630Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002629-proteinTCONS_00002629-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000021supercontigsc0000021:533124..542338 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 2.01 1.55 15.12 17.01 6.71 5.32 9.07 7.5 20.16 17.65 13.07 29.55 21.73 18.55 0.06 0.11 11.79 11.69 10.65 7.57 12.92 14.08 1.55 0.48 0.09 0.03