XLOC_001327 (gene) - C. hemisphaerica

Overview
NameXLOC_001327
Unique NameXLOC_001327
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000020:5312..12968-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001327 ID=XLOC_001327|Name=XLOC_001327|organism=Clytia hemisphaerica|type=gene|length=7657bp|location=Sequence derived from alignment at sc0000020:5312..12968- (Clytia hemisphaerica)
CGAGAACAAGCGAAGATTTTGACTGGTTTTGAAAAAGTTTTGATTCACGA AAGAAGTTCTTATTTATGTGGCAACTCTGAGCTGCTGAATGAACTCTACA GAACAAACTCAACTCTCCCCATTTTGGTGAATTGAAGAATACTGAAGGAT TATCTACANCTACAGAACAAACTCAACTCTCCCCATTTTGGTGAATTGAA GAATACTGAAGGATTATCTACAAGCTGGTATCATTTTTCTTTATCACTCA CTTTGTTAAATTTAAGCTGGGCGCCCATTTTGAGACTCAACAACAAAATT TTAGGTAGCTTCTATATTCTAATACTTCTAAGTTTGAACTCTCCCATTCT TGCATGAAGGTTTTTCCCCAGCAATTTTTAAGCACCCAACAATTATTTTT AGCCCTTTTTCTGTATTGAGCTTTCAATTGTTCCAGACGACCGATCAATC AATGTTGATTCGATTGCCGAACAACGCAATCGAATATCAATCGAACGTAA AATTCTGGGTAAAATTCAATTGATTCAATTGATATTCGATTAGGTTTGAT TGATATTCGATTAGGTTCGATTGATATTCGATGACGAAGTAGATATAACA TCTACTTTGCTACCCTTACTATCACGACCCTGCCTATGCCCCGGACAGTC CGGGGCAAATGTCTGGGGTCTGAAAAAAATAACTTTTTCCCCGGACCTAC GTCCGGGGCTCCAATTTTTGCGCCATAAATTTACCCCGGACGTATATCGC CGAGCACACTTTAAACCCCCGGACATTTTATCCAGGTATAAAACTCACCC CCTCACGCCCAAATATTTCAATGAATTAGAAAAAAGCCCGCGCGGTCAGC GATTCTATAAAAAGCGACTGCACGGGCTGTCTGGGGCGTCCGGGGTAGTC TCTCAAAAACAAATAATACGGACCCCGGGCACGCATCAAAAAAACCCCGG ACTGTCCGGGGCATAGGCAGGGTCGTTTACTATCTTGCAGAGAAAAGCCC GTTTGTCGCGTTGATTTGTCTTCGATACTTAACCTCCTTATATTCCAACC TCTAATTCTAAGACCTTTTATTTTCACGCACCTCCTAAAATTTCCGTGTC ATGTACGCTTTAATTTTCGCGCGCCTCTGATTTTATCATTTTATCAAATT AGTGTCATTCTTTCAAATTTTAAGATAAAAAAAGACGAAAGTTAAATTCA GCTAAAACACTTAAAGTGTTTGAAATGGTTTGACTAAACAAAACGATAGG AGAAAGCAAAAAAAAAGAGATGGAAAGGATAGAAAATTAATGTTACTATT TCATTTGACTTTCTTGTCTCCAAAAGTTTGGTTCTTCTTAAAAAAGGTAT ATCATACAATGTATCTACAACATGAAGAGAGGCGCGTTGAGCGAGTCCCC CGCCGCGACCCTTGTCCCGCAAAATCTAGTAGGACACTCAATAAGCTGTT TGAATTGAGTGTTCTCGTTTACATTTCACTGCCTTAACGTATAGTAACAT CGCAACAGCCGAAGCTATAATTAGCGAACACCATCGAGGAATCGACTTGG GTTACAATACTTAATTTGAGCAATCCGCCTTGAATGTCACTGACACTGGA ACGAGGAAAATATCTGTTAACTGATCACATCTGCCATTTTATTAGCAAGG TTAAGTTAATAAGCAAGATTAAAGGGGAAGTTAAGTGATTTTCAAGGTAT ATGTTTTTCCCCTGAAAACCAATCCTAACATCATAGAATTCACGAAAATC TCAACTTCAATGTCTAAACATCGATATATCTTTCATAAACACACATACTC TTTTAGACGCAAAAACCGGTGTTTAAAAGACCCCCTTTTGTTTAAAATTT CTCCTAATCTCTCTTTCGTGTGACGTCATTTGCTCCAGAAAGAATCTTTT TTAAACGACTTTGTAGTAGAAAAGAGCTGAATCATAACTGATCAAAACTT TTTTCAACCCCTGATTTTTTCAATATTTCATTACTTGATGTTTTATACGG TCTAACCATACTAGAATCCAAAAACCTTTTTTTTTTTCAATATAAATTCA ATGGTATAACCCCAATATCTAGGTATGTGAAAGAATCTTTGTATTTTCAG TAAGGTCCAGTAAGCTTAGTAAGTTTTGGACTTCTTTCCATGTGAAGAGG CCGTAAGTAAAGTTATAGTTATGAAACACNCCTCTGATTAGCGGACAATT TTATTTTCCCCAGCCGTTTTCTAGTCAAATCCTTATAAAAAAGTTTCCAA AAGGCGGACAGTCAATTAGCGGACCCTCCATTTAGCGGACAAAAATCTTT GCACGAAATGGCCAAAACCCTATATTTTCCTCTCTAATTAGCGGACATCG AGCATCAAACTGGTTATAGACTTCAAATTTTAAGATACGAGTGATTCATT TAAATAATCTTCAACACTTTATAGTTTAATTGTACAAATTGATTGTACAG GTTTGAAGTTTTGTCTTTATCAATAAATTTGTCTGGGTCATAGAATTGGG TAAATCATCGACACCTCAACACTTATGATTCAATAAAACTAATTTTTTTC ATCTCAATAACTTTTCTCTTGTTCTTTCATGACCTAGTGTCTCTAGAAAA GCACTTCGGACAGAAAATTTATATTTTTGACACCTTCACATTGCCTAACA CCAAAATTAGAGCTCATAGTTTAAAAGTTTCTAAAAGGCGGACACTTCTA ATTAGCGGACACTAACCCGTTTCCCCGATGGTGTCCGCTAATTAGAGGTT CCACTGTAGCCAGGTCTAGCAGAATCTCTTTACAAGTTTATCAGTACAGA TTTTGTTTAAAAGAAAAATTTCTGTTCGTCTTTTGGTGCAAATTACGTCG GAACAGATGCTCGTGCCATTCCTCTTTAAAAAACGCGTTCTCTTTAAAAA CTCATCTCGTAGAAAAAAGTGTTTCGAACGAATAAAAAGTAACCTGAGGC ACGTGATATTGTCATATAATGATGATAACAGCAAAAAATGGGTACCCTAG AAATTATTTAACTTCCCCTTTAATAGGGAGAACAACGGTGATATGGAAAT CGCGAACCGGCCAAACAGCCATCGTAGATTTTGCGGGCAACGTGACAGAC AGCTGTCTTTTCTTCGATTCATATCATCTCGTTTAACGCTTCAAATGTTG AACCAGAATCAATGTTAATCAACAGAATCAATTAGTCGAACCAGTTGAAT GCATAAGCCAATCGAACGTAGTCGAATCAATCGAATCAATCGAATCAATC GAATACATTAGTCAATCGAACGCAATCGAATCAATCGAGAAAATCGATTG GCATTCGATTGCGTTCGGCAATCGAATTTCAATTATTCGATTGTGTTCAA TTGTGTTCAATTGATGCGGCGTTCGATTCGTTTGATTGACATCGTCTGGT AATCGAACTCCATCGAAGAATCAAAGTTTGAGTGAAAAAATTAACCAAAC TCCAAGTTTAAAAAGTTGTGAGTTTTCAATCAATTTCACCTTCAATCAAT GGGCTGTGGTTTGATCAGTTCGATAACGAGTTTGTTGGAAGAGTTTGTGC CATTCTGTCGTTGTAGATTAGCCAGGTGGGTGTTTAAGTTAAAAACAGCA ATTTTTTAACAATGAAATGTTGAGTCAGCAGAAATGTGCTGTCCTTATAA GGGCAGTGTTTGAAAAATGTAACGTTATATCGAAGGAAAGGTTTTTCAGA TCTTTAAAAGTGATTTTTTAAATTTTTCATTGCTCAATAACATACCGTCA ACTGCTCCAACTTGGGACTATCTTACGCGACATGGGACGGCAATTCCACC ACCATTTCACCAAACCTCCAAAGTCATTTGATTTGAGTTTAATGAACCGC GTATTAGAAAATACACGATTTCTCTTTCGCACCGAGTAGGCTTTTAAATC GAAATATGAAAAATCTGTAGTGGAACACGCGCAAATGTGAGTGTTTGACG TCACTCGCACGGAAAGTTACACACTCACTATTTGTTAATCTCATCAGGCA GTAGGCGGTTAGGCGGCGGGCGTTCTCAATTCTCCATTCGGTGTCCGATC ATTTTGAATGAAAACAAATGTTAAAAAGGGCGCGCTATCAGTGAAAGTTA TCAGGACATGTTATGACAGAAAGTATGATTGATAAGCTTGGAGGAGTTAT CAAAACAAATTTATTGTCAAAGAGATTTAACAGTAAGTGAAAATACAGGC CAGTAGCAATGTTCTTTGAAACGACTTAGTAAATGTCGCATCGTCTGACC GACATAGCTCGCGTTACAGCGAGGACAACAAATTTGGTAAACTACAAAGC TTCTCATCTCTTTCTCAATAGTGGGCTTTAAGGGCAATAAACATGATCTC AGTTTTCTCATTGTAAACACAATGTTACAGGGCGCATTACATTTTCGTAG AGCATTCGAAAACTTTTCACTTATTTTGCCTTGATACTCAATATAAACTT TCATCTTTTCAACCCGGTCGACTTTATCTTCAGACTCCTTTTCCTCTGGA TGATCTATTTTCCTGATTGTTTTTTTGAATCAAAGGTTCAAAAAACGATT TTGGATACTGGTTCTTAATCAACAAAACTCGCGCTCTCTGTAACTAAGTT AAAAAGTTTTCTCTTTTGTTACAAGAACAGTAAATACGATGCAGTAAACC AATAGATCTAAGGCATAATATTTCATCATTAGTCCAGTATTAGTTGGTTT ACTGTACCAAGTTGACGTTAAGCAGCAATTTGAACGGGTTATCTTCATGT CAAGAAAAGGAATAGAACATTCTTCTTCCTCCTCAAGAGTAAATTTCAGT TCATTTTTGAGGCCATTGATCTCGACTAACTTTGATTGGATATTCTCTTT CTTTATATGGCGTAAAATATCATCCATATAGCGATTATAAATTTTAGCAT CTCCTCGAATTTGGTCATCGTATTGACTCAACAATGTATTTACAAGAAGT GGGGCAGGAAGGCTACCNATATTCTCTTTCTTTATCTCGCGTAAAATATC ATCCATATAGCGATTATAAATTTTAGCATCTCCTCGAATTTGGTCAACGT ATTGACTCAACCATGCATTTGCCAGGAGTGGGGCAGGAGGGCTACCCATG GCAAGGCCATCAACCTGATTGTTTTTGATTTTGCACTTTATGATACTCAT CCAATTCGAACCTAATCTAACACTCACAATTTTTGAAGCAATAAGAGTCA ATTAGTTCTATCAATCAGTAAAAAGTTCCATTAGTTTGATGATACTAAAT CCTCATTTCTTTCAAAAACTTTATTGTGACACACCTAAAAAGTGACAGAA AACGATTTTCGAAAAAAAAAATTTTCCGGCGAAAATATGCCGGAAAAACT TTTTTTTGGTATTTTCTCGAGATTTTATCATTAGTTTTTTCTGATTTTTT GCTCAAAGATGCGTATTAGCAATGCCCAAAACATGGCTGAGTCCAATTTT TGAGAAAATATTTCTGGCCGAAAATTGCTATTTTCTGGATTTTCATTGGA CTTTTTTNCGAATTTTTCGCTTAAATTCGATTATTTAAGCGAATTTATTT TTGAGAAGATCCCTTATAAATGGTTGTTTTTTAATTCAAAAACATTATTA ATAGCAATGCCCACCATCAAGCAAGTTTTAATTTTCAATAAAATTGATTT TTGAAGCCAGAACTATTGACTGACTGATTTTTTTCATTTTTCTTCTCGCA TTGCTATCTAACTTTCATCATCAGGTAGGTCCATTTACATGTTGCTTGTT ACATTTAAAAGTATCAAGAATACCATCAAATCTAATAGAATAGGTATCCA GACCTTTTTATATCAAGGTTTTGCTCTTCAATGGAAGGAAAGGGGAGAAG GTCTTTGACCATTATAGTGGGGGAGTTTCAACTTCTTTTCATTTAATTTT CAGTTGAGGAATGAAAAAATGGGATACGAATTAACAAGATTTGAATGTGA TGTAGACGAGGAACTTATATGTCCTATTTGCAGTGGTGTTTTGGAAGAAC CAGTACAAGCACCTATCTGTGAACATGCATTTTGTACAGCATGTATTAAT GAATGGCTTAATCTACAGGAAACATGTCCAGTTGATAGACAATCTATTAC TAGTCCTGAACTAAAACCAGTACCACGAATCCTTAAAAATCTGTTGGCAC GATTGACTATAAAGTGTACTAATGCAGAATTTGGATGTGAAAGCTTAATC AAGTTGGACGTGTTGAACCACCATTTATTGGAATGTAATCATAATCCAAA GCGACCGGTTCAATGTGATAAGGGATGTGGTTTGATTGTACCACTGGATG AGGTTTCACAACATAATTGCGTTCGAGAGTTACATTCTATCATTCATTCA CAAGGAGAACAAATAACAGAACTCAAAGAAAAAGCTATTGATTTCCAACA TCAAATTAGTGAAGTCAAACAGCAAGTGACTATTCTAACAGATGTGATAC GCAGTTTTCGGCTCTCTGCCAGTAATTTGGCCTTAGGCCAACCAGTGAAC CGTAGTTACGCTGATAGTACTTCGGATGAGGTTATACAATGGATACAAAC ATTACCTCAAGCTAGGGTTACACGATGGGGTGGTATGATCTCAACCCCTG ATGCTGTACTCCAAGCAGTAATCAGAAGGTCACTCTCAGATAGTGGTTGC CCACCTTACATTCTTGATCCATTGATGGAGAACGCACATGAGAGACGTTG GTCACAAGGGCTGAGTACATTGGAAACTAGACAAATGAACAGAAGACGTT ATGAACAATATATAGCACGTCGTATACCTGGAAAACAAGCTGTGGTAGTC ATGGCATGTGAGAACCGACATATGGGAGATTTCATGGTAATGGAGCCAGG CATTGTTATGATCTTTGCTCATGGGATTGAATGACTTTTCTCGTTTATAT GGTGGGGCTAGAAGTATTTTTTGTGACCGCTAAGACCGCTACAGTTAAGC AATATTCTTTTTGGATCTGTATGTTTTTGGATTGAATACAGATGCAGTAC TGCTAATTGTATGGTAGGGAATATGGATGTATTACATTTTGGTATTTAAT TGGTTAGTGTCTGACACCTTGCACATTCAAGTATTTGTTGGTGAGCTTTT TAAACTATCGAGAACAAACTAGTCGAGTTAAGTTTTGTTTAAATTTCGAA ATTTGAAAGTTTTTAAACATGGATATACACAGGCATTTTTTTCTTTGTTT GTTTTATACTGAGCGTTGAGTTGAGCATAGTGAAAAATGAAAATATTGAA AAAATAATTTTGGGCAAAAAATGGTTTTAGTCTATGACCTTCAAAATTTG TTATTTTCCTAATTGCAATGTCTTTCTTTGTTTTTTCAACGGTTCTGAGT TTTTTCTGCAATAACGGTATTTAATTTGGAAATTTCGATTTTTTGAAATG AAGTCCTGTAGTATCTAACCCTTGGGGACCATTTTCTTCGAAATTTATGC ATCAGGATCTATTATAAGAAGTTTAGAGGATAGCAAAAATAATTAATTTT TTTATTTTGTATTGTACATTATTTTATTTTTAGTTTTTATAGATCAGAGC GAGTGGCCATAAATAGATTTTAAAAAGATTTTCAAACCAAGTTCAAAGTT TATTTGGTGTCATAAGCCTTCAGCCATTTTTTTTGTTTTCAGCATTTTAT AGTGGCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002485TCONS_00002485Clytia hemisphaericatranscript
TCONS_00002484TCONS_00002484Clytia hemisphaericatranscript
TCONS_00002483TCONS_00002483Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002484-proteinTCONS_00002484-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000020supercontigsc0000020:5312..12968 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RNF41E3 ubiquitin-protein ligase NRDP1 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
31.1 27.99 21.64 22.59 12.44 9.79 12.14 12.83 6.3 8.23 6.36 5.27 6.11 5.41 6.93 7.35 8.71 8.3 4.48 4.91 8.88 7.62 37.75 33.3 8.58 9.49 8.56 6.89 22.81 27.64