XLOC_001213 (gene) - C. hemisphaerica

Overview
NameXLOC_001213
Unique NameXLOC_001213
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000019:1065936..1073540+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001213 ID=XLOC_001213|Name=XLOC_001213|organism=Clytia hemisphaerica|type=gene|length=7605bp|location=Sequence derived from alignment at sc0000019:1065936..1073540+ (Clytia hemisphaerica)
CAAAAATTCTTTTCTAgactttaaaaacaatttgaaaattgatataaaaG ACAATAGAGAATTTGACAAATTCAATTTAGAATACTCCAATCATGTCTGT TAGAAAGAAGGTAAGAATATAGATTTTCATCATGATAGATACTTACTTGC TACTTTAATGGGTTCAATTTTtatggggattaaattttggaGATTggatt aagtcccaatggaaatttgaaaaggtcctatccatgaaatttttttgaat taattgtgaaaatgtcaaaaagacCACTTTTAACATGTATACGGctatca aagaagcgctaataatgcatATTTCACAACCAACATGCAACGTCTGGCAT AGTTTGGTAGTTAAATAgcaaaaaatagcacaaaattgagaaaatattaT CACAatccccgcaaaaattaatcccattTAAGTAATTACCTTGTTATGTG GGTTAATTTTCACTGGACTTTTTCCCAAATTgagaatctaaaatttttgg gACGAggcaaaattttgtgaattttgtgaATAAATTAGTTCTCTTtgcta aaaaaagaaataaatggtATTCATATTATTTTCAGGAATGAGACATTTAA CTTACAATTTTTcaattgatttttctatttctctATTTCTCAAGGTTTTA TTGATGGGAAAATCTGGTGCAGGAAAGACCAGTATGAGGTCCATTATATT TGCAAATTACATTGCAAGAGATACAAGAAGACTCGGTGCTACAAGTATGT ATTTATAATTTCTTTCCTAATACATATACCGTTTTAGTACTTagtaaata ttgatttttgtggTGAAAGCTAATTATAAAAGTTTGCCCATTAAGAAGAA TAAGAGGGGTGATAATTGTTTGCATTCATAATTTGAGGAATataaagtct tcttttttacaatcatcaaaatgaaaaacatgCAACCATCACCACCAACT TTAGAAATGCGTCATAGAAGGGACTTTTTCCGTTCAAAATGGGGAGTTTc agcttttttactttttgcatGCAGCTCCATTTACGTTTtaacctgtttgt gtattttaatAAACAGTTGACTGCAACTGTAAATAGTACAGGTTCATgat attttaaaaatagggAGATGTGATATAAATGGGTggaggagggggggggg tgacCCCTCTCTAAAAGATGCGATAAAgaagatttgatttgatttttgat atgaTTTGGACAAGTAGCttgcaaaaaaatgtttacaatATACATGCAAG GTATATAATGATCATGTAGTATTTTTAAACTAAATGAGTTTCATCTTTTT ACTTTTAGTTGACGTCGAGCACTCTCATGTTCGATTTTTGGGAAATCTTG TTCTGAATTTATGGGATTGTGGAGGGTGAGTAAAACTTTTCATCGATTAA AATCCCATTGAAATGTCTTAAAAGTAAGATGTTATTGTAAATTGAGTATA TCTTTCCAGAAAAAAGTATATCGAATATAtcgaaattttttcttcaacca CATGAGAACTTTAAACTGTCAAATTGCTCATATATATGGGAATGGGCTCC TTTCGATGGGggtaaatttgcaatgtttaggGGTAGTTTAAGTGTCCAGG AGTACAACACGTGACCAGGGGGTGAAAATTGAAATGTTCATGGGTAGATC ACGGAAAATGAATTATCCTCCAACCCCATGAACAGATAAGGTTGCCGATG CTGCAGATCCACTATTGTAATCGTTGTGATTTATCATTTTAGTCAAGAAG CGTTCATGGAGAATTATTTTGCAAGCCAGCGTGATAACATCTTTAAGAAT GTGGCAGTGCTTATCTATGTCTTTGATGTGGAGAGTCGAGAGCTTGAGAA AGATATACATTACTATCAGTCATGTTTGGAAGCTGTCTGGGAACACTCTC GGGAAGCAAAGATCTTTTGTTTGATTCATAAAATGGACTTGGTGCAAGAA GATCAGAGAGATATGGTAGACTTATTGTTATACGATCTATTCATCCCTTT TATTCCTCATTCTTTAAgcttatttttctgaaattgtgaacaattttatg tattttccatttatttttcGTTGAGGAGGTCGATTGCGGGCGTAGATTTC TGGGAAGTTTACTAAAATTTATCTTGAAGAAATCACCCAGAACAAAAtgg atttttgatattttctacaTTCTCGTTTTTTGTAGATCTTTAAGAAGCGA CAACAAGAATTGACGGAGCTGTCAAAACCTTTAGAATGTACATTATTTCC AACTTCTATTTGGGACGAAACGCTGTACAAAGTATGGATGATTTTCATTA CAATGTTCCTTTTTGTTGTCTTTTGCTACCCTTAATAGTGGTTAAATAAA catcaatttaaaaaacaagagtTATGCTTTACTTACGACATTTATAAATT ACAGACTAGAAAACTGTTTGGTCTGGAGGCGATAAAGGTTACCCTAGGTA TGTAACTTCACGACAATCACGGTGTTTTTAGTATAGTAAATTCTGAGTTT TCCCTACAGAAATTTCTAGCTAACAAAGATATTATCAGTTTtacttgcca aaataagttcccttcaGGTATTCATTCCACCTTATCATCATTTCAATTTT gacacattttgaaattttccttgtAGGCGTGGTCAAGTATCGTGTACAAG CTGATTCCCAACGTCAATGCATTGGAGGCGAATTTGACTCGATTTGCTGA ACTGATAGATGCTGACGAAGTGTTGCTGTTTGAACGTGCTACTTTCCTTG TAAGTCAAGCATTTACGgtttctaaaattattttttgttcattataGACC TAAAATGATTGGGTTTTTACCAAAATATTgccccaaaataattttttgct caCTATTTACACTTCAAGATATACCTTCTCTCCTGTTTATCTGCTTAGCC TTACGGTTCACTATCTTTGGTCGGAGGAGGGCCCGTCCCTGAATTAAAAT ATGCTCAAATTCTCTTAAGAAACGGTTATATGGAGCTAGTCTTTTCAGTA AGTCTATGAATAAATAGATAAATTTTTGCTTTGTCAGCACTTTTAAATCC CCTcctaataatattgaatttgttgcagtattaatcatttttctatgttt ttaaGGATTATTAGATTTTTTGAGATCTTTCACCTATGTATTGCTTCCAG GGTCTAGAAATCTTTTTGTCTAAGTCTTCTCCAAAGAAATATgacaattt gaaatctctaaaaatgggttctaaggacatgttttttttttactgtacca aaatcaggtcTAAACAATTAGAATTAgcacctagatttcaaaaatgatca atttgatcaatttgatcccattttcctccggttttttccaaaaaaaagag gtcGATGTGAAAATTCAATCTTTTAGCTACACCCTGATATAAGTTTCGTA TATAAATTGGACAAGACAAAAGCCAAATATAGAGCCGACTTTATAAATCC GAAATagactatgatttttttcatcctgaaatactccggtTTCAACAAGC GATATCTTAAGTTCCATAAAAGCTATTAAGATCGGACAAAAAGTATCGGA CAGAGCTACTAaactattttcttatttttgaataacgatAAGAAAGGGTT CAGCTGTTTCTGTTAGTGCCGATTTGAGCCGAGTTGGTTGAAAATCggca ttttggtacagtcaaaaaaaaacatgtccctAACACGCTTCTTACGAACG TAAAAATTCTATTGATTTCTCGCTAAAAGTAATAAAACTTGTAATTTACA TATCTCGACATCTGAAAAGGATTCTGAAATTTTGCTCAGGATCATTAAAG GAACCTACAGGCAAAATCCAGAATATAAAAAAGGTGCAAGACTTCTATGT TGTCAGTCTCTCATATCTTTCCTTCACCGCAACAGGTTATCTCTAATTGT CAAAGGAAATCGCACAAAGATGTGCATCGTTTTGAAAAAGTCAGTAACAT TATCAAACAATTCAAGTTGTCGTGCAGGTAAGAGTAGAGAATACTTTGAG CTCTTTAAATTTATGTTTCAAAACATTGCAAAGGATAAAAGTACAAGCAA GTCAAAAGATTTGCTACCTGTTTCTTCCTTGGCACATCATTTGTCACTAA TACAGTTTTAAGACTGCTTTACTCATTTTTAATTTCACCGATCGATTTTC CCGTGGGCCTCGTCGCAAGGCATAAATTGTGTCAATCGACATAAAATTTC CAAGAAGTACCAAACTCTAATTTGGCGCATGCGAATGCTTCGGAAATATC ATTATCCAAAATAAGAGGAAAGCGCATTTCCCGACCGAAGATACGACTTA TTATAATCAACTTGTTATTTAcgcaacatttttttcatttcagtaaACTT CACGCTCAATTTCAAAGTATGGAAGTACGAAACAGTTCATTTGCAGCATA CATCGATGCCTTCACTTCAAACACATATGCCATGGTCGTCATGTCTGATA CTGACATTCGTAAGTGAATTTTGCCtcatacacccctgtattatgagttt atgtatgtgtgtttttcagcgacggagacggtaaggttctagtttgacta gatcctgaccaactgaggacgacggtaaatcagcacttttaccgtcctcg attttacAGGTCCGAACTGCGGGCTTTTCCAAATCGTTCAAACACTCTTA AATAACTTCAAAGTTCAGTCAAGTCTACTTAAAATTAGTAAAATGTGTTA GCCTAGAGTATTGCCCGAACaaatagactggagtcgtttttaatccgtgt aatacagtaatattgtTATTATATAAGTTTATATACCTTAAGTGTATTGA TTTCGACAGGGATTTATTTGTTTGGCGGATTAACCGATTTTATTTTGGTA AATTGACCATCCGCCAAATCTAATACCcgtcaaatttaacaaaaatattt ttttaagatatgaattctaccgggtgcaccaaaaaaaagtatacaacttt gtcgagatattgtgagcttcaggatttaaattttttgttcattctttttt tattatatagagGATGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNactttt tcaaatttaatgtatgatagctcaaaattcaagttagagcatcctctata caataaaaaaagaatgaacaaaaaaattaaatcctgaagctcagaaaatc tcgacaaagttgtatacttttttttggtgcacccggtatatgaaatcagc atttttatgtgaaggtaattttttatttacctGTGCCTCACATAAATTTA CGTAAAACACGTGTAGATGTTCCAAACATAAGTTTGTATTCAACcttaca tttctttttttcgttACAGCTCCAGCCACTACTATGATCAACATCCGAAA TGCACGCAAATATTTCGAACAATTAGAAAATGAGAAACGAATTTAAAGAT CGCCACGCTTTAGATGTAATAAAAATATACGATATTATCTGGATATAATC AGTCGCAAAACCATCTTATTACACTTATTTACATCAGTGGCAGCAACCTT AGGATCTTTAATATCTTTACTCTCACGTAATGTGTAGGAAGGAAATTTGA ATTGTAAATATTTGATACAAGGGGGTGAATGAAGGGTATTTGTGACACGC ATGCGCTCTGTTGAGTAAAGTGTTTGTTATGAAATGGTTTAATTACGTCA Cagaaccaatagctcattggttggaagtgacgtaaaatcagtcaatacgt cactttcaaccaatcagctattgggtggaacggaagacattgcaatgtgc aatggtgcatatcatgaatttgaaACCAGCAAAGTGCcaatcattgagtt taaaacccTAAAGAGccagagaggaatcttcaacctttctcaagcaagaa aatgtGAAGTCTTAAGATTTACACCGTTTTTGGAATGACAGATTAAATCT AGTGctcaggctttaaactcaatggagcCAAGTTTTTCATTCTCCAAGAA ACCTTCCGAACGCCATCTTTCTAACGAAAAAAGACCTGAACTCAGTAAAA TGAAGATTAATTTCAAAATGCTAGTCAATTATTAAATCGTCTGCAAGCTG TTTTCTCTTCTGGAAGCAATTTCTTATTATAGCCCTGGGAATTCTACGGA ATAATGTTTCTTCGGGAGTCATGAAGTTTAGTACTTTGAATACATATGGC ATTCATTTAGATTTTCAAGTTAATTTTCTGTTAAAACGAATCCGTTTTTT CAATCTCAATTCACTTGTTAGTTTAACTTCTAGAGcttcttttttgagat ttaaaaaaataatccgTATGAGCTAAATTTTGAGCTACAAATCAAGTTTT CGAGTACCCTGCAATtatccaacgcctttttttgtaattttgagcgaatt taattttctttaagcACTTCACatataattttgaattttcgatAATATAA ATTATATAGCccgttattttttaaagaaagaaatgttttaaaactttaat ttaCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002289TCONS_00002289Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002289-proteinTCONS_00002289-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000019supercontigsc0000019:1065936..1073540 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RRAGBras-related GTP-binding protein B long isoform Homo Sapiens
RRAGAras-related GTP-binding protein A Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
65.41 64.48 67.74 67.33 36.27 26.17 39.04 40.23 66.59 58.66 49.6 41.13 34.61 30.96 51.27 55.01 54.86 50.33 26.77 46.05 42.68 42.56 42.18 45.81 38.59 45.92 44.25 38.44 70.61 58.03