XLOC_001211 (gene) - C. hemisphaerica

Overview
NameXLOC_001211
Unique NameXLOC_001211
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000019:1034024..1042630+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001211 ID=XLOC_001211|Name=XLOC_001211|organism=Clytia hemisphaerica|type=gene|length=8607bp|location=Sequence derived from alignment at sc0000019:1034024..1042630+ (Clytia hemisphaerica)
AAAATATATATTGGCGTTTTTACCACATATCTAGCTTTGCTTGCTGCGTC AGTCTTTGATACTGATTTCTTTTCCCTTTTCTGGCCTTTTGGCTTTTTTT AAACTTCCCACTTGCAGTAACAGCCAGCCCAACTCTTCATGTAATGCGGC TGGTTAGCTCTTCGGGCTGCTACTTCTAGTACGTCGCTCTAACTAATGCC TTCCGGCTCTGTAgagccaaaatcaaaatcaaaacaaagattttccTTGG AGTCCGAAGAACTGCCCACCCGTAGTGGTGAATCTTACCAATAGCCGGAA CCTGTTAAAATCCCTTACAAGATCTCTGACCAGTGACAAAAGGTTGGCTG ACCCTGGCATAACAACTCCACTACAAATCCTACCAAATCTTTGGAATCAT GAagctttttatttgcaaaatcaCAGGTATGTATTTTCAACCTTTCTTCA TTCTCAtgggtcaaaaatttttccatttcaaccaaaattttGGCTGCTTT ATTACAATCTAAAAGTGGGCTGTGATGGTTTGATATAATTTGGCATATTC TTTCCATGTTCCTGAGCAAAATTCCCAGATTCTTCCTTTCGTTTAAAGTC AAGATATGACTAATCTGATAAGAAAAGTTGAATAAAAAACATCGTTATAT CTAGATGTTTCGGTGTTTCTATCACCATCACGATGATAGTCCTGTGTTGT TGATGTCGAAAATTGATTCATTCAACCAGACATCcccgctcgataggatc gattaTCGGAacagctcgatgacggatcgatatgtgatcgatggattact taacaatccggataggagatcgatagggcggtcatcgaaaaaatgctctg ttcgcatCGCAatgggtgttaaaaatgcatgcgggcggacgggcggttAA AAACATTcccaggttttttttaatcacgccactAACTCAGGGacgggtgg taacgcgagcaaaacaatttttcaatagtCGTCAGaggaattgagaaaaa agctatactttaaaagaacaaattgcttttcccagatttttttccgcatc tccgcacaggaaaatcagcggaaaatttcatgcgggcgggtgacacgaat agaacaatttttcgatgaccgcctagatagcgactccagaagtcatgcaa ctttcgttgacgtcaaaccaaatgtttcatttttccgtgaactttgaacc cttggaacttttcttctatgtatgctaaagcgttccggtttttactaaat gaaagcccgtgatcttagctttccagcggtatataacactgtggacacag gCTAGACGGccaattggtaaaatgccgaacgttttgcaacattttgaaaa ttgtttgccgacgggagaaaatttttttgcaactATCGAaaaacaaatgt gtctggaaacggaggaaaatgtatttggaggctgaaactttgtatgttta tcagaaaaagggtgaggaattcaaaaatcacaatcgctaattctagttct ttcattttcatgtatagtgacacttacttacaaaattaatgacaaaatca taaaatatgatgcctaacaagacaaaagcacgaaaaatatttattatata tacaaaatgtgatgtggatggtgtgaatggataaaaaatggcaccataca gaagcttgcaaggtccctaagagagtggttttagaaagttggaactaatt aattattcaattattattttaatgtcttactgctgcttaatgacaatttt tgacaaaaatattaacagaatcataaaatctgatgcaagaaaagacgaaa acacgaaaaatatttattatacaaaatgtgatgtggatggtgtgaatgga tttAAAatggcaccaatcagaagcttgcaaggtccctaagagagtggttt tagaaggatgaaactaattaatcattcaattgttattttaatgacttaat gacaatttttgacaaaaatattgacagaattacaaaatttcatgtcttac aagagaaaaacaccaaaaatatttagcatgccgaatgtgatgataacatg ATGTAAGTTACATGTGAGTTTACCGTCGTCAACTTACCCgaaaatagatg cggcatgatttcatttaaattcattattcattattttcccaacagcacct tatccaccatttctgctaaccattctctctcaaaataaaaaattttgctt cgcttCAACCCTACGCATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNGGTcacattttctgtaaaaaatcttctttgtttacccgtgTTTA CTCTGGGAAAAAGGTCATGCGTAGAGGGAATCCTGcgtagagacgatttt aacaacaatggaggttgtagttgtaaagaaatatagaaataatgaaattt tgagcaGTTCAtcgaaataatgaaattttcatgcgggtgctttttagaga tgcgggcggccgacggtaaactcacATGTGACTTTCATCGGccatatggc tggatataaaattacaccaatcagaagctcatGAGTTCCCTGAGAaagta gttttagagcgatgtgttttattatatgtaaccatcatataacattacaa acattacaatatgtaatatacctgttatacgtataatatggttttaaata ttttctggtctgcgttatacacggcgcaaactgcgaaagatcgataaaag cacatggttaaattttgatgttcgaaatggttttatatggatgaaattgc ttgagaattatgtttttgataattctttgtgttttccaaacattttcctc tgcaatgacattgattagagtcNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatttttagtcaaattttt gacactaaaatttgaatatctttacaaccacttatcctctggaggcctat gacccctcattttctttctttttcaaagctctacaatataggatagattt tgaaaaaaaaattaaaacttgaaaaatcttctggagttgctagcctagag gatcgatactcaagattttttgaagcttatgattagttattgATTATTTA TCAATCTTATCAACCCTATCGACTCCTACTCGATTTGCgaaatcgattaa cgattgatgacgaatcggtatactcaattgaaatactagctcgataatgt atcaacgaaggatcgatactcaacactttttaatggctgaatcttccatc gatctcctatccggatcgttaagttaatccatcgatcacatatccaTCCA TCATCGAGCCGTttcgatgatcgatcctatcgagcgcggacgtctggttg aagatagacaggcagctgatgacatcaaaaaagtgaataagtGAAAATTC GAGGGACAAATATTGAGTATTTATTATGAAATCTTTATAGTTTAGAgagt cagaaaaatttactCGGCTTGTTTAAAAATCATTACTGGACGTGTCCgag aataatttattaattgatgACAAGCAAAAGTGAGAAATTgatgttgcaaa atttcaaagtttcatATACCATTCGAAGCGTATtttgatgtagatttcaa attacatcaatcttaataagtaaaaatttgaataagaaaagctcttctat gacgtcatttttgaaaaaatgcttcattttATAAGGTgaaaaaatgcttc attttATAAGGAATTATGATCTCAATTTTCTCAAGTTAGGCTGAGAAATT GAATATNCTCCCTTCCCTTGGAAAGAATTCAGAAGAAATCCCTCTGAACA AAAGTACTTTTGAATGGTTCCACTGTGAACCCTTCATTCGATTCCTAATT GATGCCTAATCATTTCTATttttaggtaaagaaatctTCACAGATGCAAG CAAATATGAATTAGTTGATGATGCCTACTACATTGTGAAAGGCAAAATTG AAGCTTCATCTAATGAAATTGATGAATCAGCCATTGGAGGTACATTTTGT TATTTAATTTTGAATGGGTGTCTGAACAGGGGCTCTTCCAGAACTTTTTT GTACATGGGAGTGGAGGATAGTGTCCAgtgtacagtatatggcccccaaa acggagacggcccccaaaacggaggttgtcattaaaatgaggattctgac ttgtagatttattaGAATtgaacgatttttgtttatttagaaagaatgat ggttatactaaaaAGTNTGGTGTAAATTGTTTTTCGATTTGATgacgttg aaatttgacatttttaggggGTGAGAGGGTCATGATTGACCAAAATCACA TGTAAAAtttaagtcataacttttgaaatctaaatttttacctattgaga ttgattcttttaaatacccttcctaaaaggaaaattatttcataaaCGCC CCTTTTAATGAACGCCCCCTCTAGGCAAGcggcgtttattagaaacttgt gtctttaatacttcaataccagcgttgattgggtttgaaaaggaagattt tagtcatttctcgtaaccagagcagttttcgattcaataattcaataaac gcccccttcttttaaacgcccctcttAAAATCGAAAAACGTAATACAGTA CTTTTTTTCTCGATTATTTCTCCCTTCCCTTGGAAAGAATTCAGAAGAAA TCCCTCTGAACAAAAGTACTTTTGAATGGTTCCACTGTGAACCCTTCATT CGATTCCTAATTGATGCCTAATCATTTCTATttttaggtaaagaaatctT CACAGATGCAAGCAAATATGAATTAGTTGATGATGCCTACTACATTGTGA AAGGCAAAATTGAAGCTTCATCTAATGAAATTGATGAATCAGCCATTGGA GGTACATTTTGTTATTTAATTTTGAATGGGTGTCTGAACAGGGGCTCTTC CAGAACTTTTTTGTACATGGGAGTGGAGGATAGTGTCCAgtgtacagtat atggcccccaaaacggagacggcccccaaaacggaggttgtcattaaaat gaggattctgacttgtagatttattaGAATtgaacgatttttgtttattt agaaagaatgatggttatactaaaaagtgagcatgtttttgatggtttga gacagattcaaaataacatatttgcgtatGAAGgagatattttaacacca aaattagataaaaattgcatataactcactctagctcctttgatattgaa aataagttatgaaaatggggtattggaaactttctacacctaatgacgtg cagaaaatgcagatacatctgtgacttcagaggatgggtaaaagatatag catcttaaaggtcaaccagtattttgggagcctagaatcagcattgataa aaccgaaaattctaaatatgagaaacagcaaaatgtcttggaattccatt cctatcaggttgagttaatagcttatagcaaaaaattaacatcatatata aaaattttcgctgaatcagcaaaaatggcaaattctgtcatttttctgca aaatataggagaaaaatatctttaaagcttaatattttcagtttcagtga agcttttcttctcaaattttcacagctttttcCATTCATGAATgcaacta ttttcaaaagacattgattttcaaaaacttgattaagacgttgttaaatc taaattgtcattttgaaaatttctaaattttcagtttggactttgcaata tcgaacatcttgaaatatttcataaaaatcttaaattttacatCTATCAG GTTGTAAATTTAAGggtaaacacaaatatgttcatagtttttcctcctat taccactgggcttaataatttgattttaactatacctccgttttgggggc cccaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtccgtt ttgggggccccaaacctgcattttgacaaccaggggtatactgtaaaaaa tttatcaaacaaatttatgcccaaaaccctctaaatcacatttcaaaact acggtcaaaattttgtattgatatcttaaagatatctcgagaaatcgcta aaattgcaaacctctgttttgggggccattagaaaaaagctacctatctt taagcgattgaataatattgttgaaattgaaaattttgaaaaagaactgt cGGGAAATAAaatagagatgttaaagttttgcatgcaagaaaaattcttg taaaacctcttttcccctagctttgagagaaattttaaatttgatcgccg ttgtgggggccacatactgtagtgaaaaatatacaaaatttgccttgtcc cgGGGTGATAAACTGGTTCTGTTTTTGGGTAATTTGGCTCTGTTTGAGAG TAATTTtaaatgtccagggggtcaaaagtcatgtccgggggtaaatttcc aaaaattgttatatcctctaCCCACATTCATGATCCATGtataaaacttc aaatttgGTCAGTTCGTTCCAATATTAAGAGGTTTTTAGTTTCGCCGGAA AggcttgtgatgacgtcatcataaaacTTTCAACCCTCATAACTTTTAAT AGGAAGATTAAGATAAGGCATgctttatacctcaattttcatcagcattt catgctttTTCCGCTgcaaccatcagattttgaatattttcaaaagaaat tgtttgcccagccacctgatgacgtcatctggcaggtggccaggtgacAA AATTTGGTATTACTGAaggttactgtttaaaattaagttttagacccttt aaggatcatctgtgccaaatttcacgattttatcaccatctgaagtattc ttacgtttttatgtgctatCAGACCTCGCTATACATTTTGTGTCACACAT GGTacatttttaataagaaaatatCTCATTTATTTTTCCAGATTCGAAAT AGTCTTGTTTCACCAATATGCCAATTATATTAGTGAGTATCTACCTCATC AAACACAATCCTATCTCATTTTCCCTGTTAGGAAACAAATCTGCTGAGGG TGGAGATGAGGAAGCTGCTGAAGTCCATGTTGCAATTGTTTCAAGCCTTG TCAACTCATGCAAACTAGAAGAGAATGTCCCAATTGCTTCcaagaaagat ttcaaaggcaAATTTTCTGCCTATTGTAAAAAGATTACTGGCTTTGTAAA AGAGGAATCTCCAGACCGCCTTGATCACGTTAAATCGGCAATGCAAAAGA AGGCTATGGAAATAATCGGTGACTTCGGTACTTATCAATGGTATGCTGCT GAAGACGACGGTTTTGATTGCGACGGAGCACCTATCCCACATAAAACTAT CAATTCTGATAGTAAGAAAGGTGATCAAGTAGGCGATGTTTGCGAAATTA TTGTGTGGAAGGATGGTGTCCGTGAAGAAAAATGTGTAAGTTTGACATTT CCTTTGAGTAAATTCTTCGAATACAGTCGAAATAATCTGCTTAATTTTCA TGGCGGGTTTCATTAGGAtttattaccttaagggaagcaATTTTGGCGGA attaattttagcatttttgggTGTCTGACCCGAACATTaattccgcaaaa attagttccgttTAGGTAATCTCCTGCCGTTTGctcaaaatgtatttttg aaCTCAAGATAAAACAACTTTCTCCCTCTCCTGCTTCCTGCGTGCACAAA AAAATTTGAGTGTTCCTTTAttaattctgcaaaattttaaaaatgggCTG GGCTAACTAGGGCTACGTTATTTTCAGAATTAATTTTCTTCGATGCAAGT GATTTCTCTCACGCCTTTCGAACTTTAAACTCCATGATATCGACttattt tgatttcctttttttcagtAAATCATTAATCAATCAATGGGGAGAGGCTG GGTCAATGTTAACCAACCATCGGACGGGTCGATCGAATTTCATCTAAAAA AGATGATGTACTCAAAAGTCTTTATTGATTGAGAGGAAACTACTATTTAG GAATTGCCATATTGTACATTACTTGAATTGAATACATTCAACGAACTAAT AAAATAATCTTTTCTACAATTAATTCCGTTGTCAGTTTTAATTATTacaa ctagtcatagctttcactatcCTAAATGCCCCCACTGAAAGGTCATGCCA TGcacttttaaagcttttaatgctttaaagattgaagcataaaaacaatc aggaataattaattggtttttgttaattattgattggttgattgattgat tgaggcaattgcttgaaaaaataatcatattccattaacaaaatacttga agaattc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002285TCONS_00002285Clytia hemisphaericatranscript
TCONS_00002286TCONS_00002286Clytia hemisphaericatranscript
TCONS_00002287TCONS_00002287Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002287-proteinTCONS_00002287-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000019supercontigsc0000019:1034024..1042630 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TPT1translationally-controlled tumor protein isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1424.52 1538.99 1793.33 1998.27 878.41 685.08 902.83 946.75 1789.42 1367.55 1830.6 2096.21 2092.46 1909.9 1641.76 1471.23 1493.19 1664.01 1313.81 1396.1 1973.31 1942.52 1549.36 1512.21 1189.11 1215.05 1533.28 1738.11 1193.06 1326.61