XLOC_001205 (gene) - C. hemisphaerica

Overview
NameXLOC_001205
Unique NameXLOC_001205
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000019:751067..758212+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001205 ID=XLOC_001205|Name=XLOC_001205|organism=Clytia hemisphaerica|type=gene|length=7146bp|location=Sequence derived from alignment at sc0000019:751067..758212+ (Clytia hemisphaerica)
gtaaatttggattttttaatttcgctaAAACATCATCACAAAATTGTAGG TTTACATCTTGTATTGTAGTATAGGTATAAATTACTGACCTTAAATCCTG GGGCAAactatatctgccatctttcaTCATAGTTTTTAGAAAAGTGTTAT CccggtaccctaatggtagctaCTTGATGTTGGTCAATTTGTATTTTAGT TTGAATATTTTTGCACCACCATTGAGCAGTGCTACCAATGGGATACCCCT ATAAAAAATCTCCGTCCATTTTTCTTGGCCGGGATCGACAAACTGTGTCC AGAATGTATAAAAGTCATTGGTTTACATGACATTTGGCCTTAGCGTGGTC ATGAAAACACCTCTATGTCACAAATTGGTTGGGATGGCCTacctactgga aaatttgtcCAAGATTTCGTtgtgaaaaataccctacaatccCAGCCCCA CTGGCACTGGGAAATTgatactttgatttcatcctcattcgaaattcaat ctAAAAAATCTCCACTGGATTTCTTATACTTGAGACAATAGTATTTCTAC CCCTATTGGGATttaaatagaatttttatatccccaatgtgggaaaaagt tccacttgggctgtgagacaggggtgtataaaagAAAGATGTTATAGACA CAGGGTGGTGAAATgtttaaagttttgtttttaaataagagtgatatagT TTGCTTAcacatcaattttaatttacaagctttttcgtattggattgaca cggatagTTTGCGTAGATTGGTCAGAAAGCGGaaaagaaaaacgtttttt tgcttatatcagcataacataacaataggaagacactgtcccgatatgaa atatgtgtctgatttgaaacgggaacacctgtataaaaacaaaaccttta aatgtaTTTGTTTTAAATTCCAGGCCAAACGAAATATTTGATACCATGAA GATGAATATGTTTCAAACAAAGATGAACGCAAAACGACTCCTTTGTTACG CAATCTCGGTCGTTCTCAGTAAGTAGTCAAAGCAACCCTCTTGGAATTTT agtgagaattaattttggcgagtgtCGTGTCCtttaaataaagatttttt tttgaaagaaaatatttttgtgtatttttgaaggaaattcaTTCAATGTA TTTTAGAAGGAAAATCATTTTGTGTATTTATGAAGGAAATTAATTTAAAG TATTTTAGAaggaaaatcatttaatgtatttttgaaggaaaattcttctg attgtttttgaaagaaatttcttaaAACGAATAAAGTCAGTTTGTGTATT TCAAGAAGGAAGGAGAATATAGTCACATAAAATTGCGGGAATACCCTTTT CAAAACCACTGATCACAaacctaaagtctattcacgataagtgtgcactc ttttttcctctacctataacttttgaaggaattcttcaatctttataaat ttggtatcatcggaaagatattagtgagtggaacaatttgaaataaaaaa aatctttaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNtgacgttcgatgattaaggattcacttcagtgaa aatgatagttatagcacttttctacaagatcttcattgttttcttcttca ttttcatcttcaattttataatcttcttaaatttttttctatttcaaatc gttccactcactaatatctttccaatgataccaaatttataaagattgaa gaattccttcaaaagttataggtaaatgaaaaaagagtgcacacttatcg tgaatagactttagtaacCTACTATCAATTAAGCTGGAGATATGGAaatg gaaaactttttttggaaattctgtatatctttaatttcattttttgcgcT ACTTTATAAAGACACTTCAGCCTGTCCAGACACGATACAGCTGGCTAGAT AGctggtttacaaaaattcatttATGCCATTTTTCATTCGCAGAGTTCAT CAATACTGTCCAGACATCAGATACAACTGACTAGATAAACTGTCTTACAA AAGTTCATTTATTAAATAATTGTCAACTTTGTTCATTCACCAGAGTTCAC CAATGCTGTTGTGGACATAGAAATTGGTCATGGAGAAGATATACAGATGA CGTGGAACATACCACCAACCGCAAACAACCTCTTCATTTATCTCGGAAGC CAACGAGATGCACCCGTACTAGCACACATATCAAAAGGTGATATTTAAGT TGGTTTTAATCTTGTTCCCGGTTCAGAATGGGCTCTTGCAGAAAATGCCC TTACATGGGGGTGGATGATATAGTGTCCAGGGGGTAGTGAAAGCTCTACA AAATCTACCTTGTCCaagggtaaacttgctctgtttgagtgtaattttgc tctgtttgagggtaattttaaTTATCCAtggggtcaactaatgcttgtcc ggggggccaaaagtcacaatgtccggggggccaaaagtcacaatgtccgg ggggggggggaaatttcCAAATGTtaaatcctccacccccctaagtgcta agttttaatgggtaattaatctttttctttcgaagtcttttcaaactgtc tgcaaagaattgaactgtttgaatcttttcggaaaaaatttctaaattaa tacatcaaaagttatggatgtttttttatgagaaattgggatgaaaaatt ggtcaaaaagcactattttcaaaattgtgagacaaataagcttttagaaa aattttccgaaaatccgtttttagttcggtaaaagatacaccatctaccg cgaaaaacttttcaaaatattttttcttcgccgaaaataagctcttctag gttgaaatactcttcttctcaaaaatctttattttcttcttcatcaaatt ttttcattgcgattcttaaattttcagactcaaggataattggcctaGCA GAAAACGTATATCATAAGATTGGTGCCaacaattttgttattttattttg acaatATAATATTTCGGATTATTATCCATCATCAGGtctaaaagtaaaat aaatagatataaaaacagttaaaatcaATCGTCAACATTTATACATACCC TCTAAAAATTACATCCATACATCTATCCTACATCTACAACtcaaacaaaa agtaaaattgaatcatttttcaaaacaaattgagAAACGATTCCCAGGCA ACTTCTCACCTGGGAATAGTGAAAATAGAAAGTGTATAatatgccacagt tttgtgtgctacatcaagtagaaattcatattttgtatgtggcaaatatt aaaaattcactatggtcagagcccttaaactaGCAAGAATAAGGCccaaa atggttttcttatCATTAACACTGGAATGAAGTAAGTAAGACCAGGTTCT GTTgggaaaacaagaaaaaacaagaattttttttgagccaaaaggtcatc tacgtgaagcaacaatcATTTCATGCAACACAAAAGGCACTGGATGGGTA CAGTGAGAAATTCTTAAGCCGAAATTTTCAAATCCAAACATTTTGATGCG TCATAGAAGAAACCTTGGTACCTGTTGGTACAGCAAAAATCAACCAAGAA TTTATCCATCTTAGATAGTGATCTAACTGACTTAGACATTATAGTAAAGG GTAAACTAGTCTAAAGTCATAATAGTCTAAACAGACTTATAAATACAAAC TTCTTTCTGCCGTACAAAGTACTCCGTAAAGTCTTTACCCCAATTTCCGT AGATCAAGCTCTCTAAAATATTGTCCAATTCATTCCACGATGTCTCTgcc aagttttttaaaaatgtcaaacacATTGGATGAGGCTAGGAGTACTGACT TGTATGGTCGGCGGGACGTGCAGCTGAAGTTTATAAAATAGACATTGTca aatatgaatgtttggtagaTTTCGGATCCAGTCAGAACGAATATTTTTCT CGTTTTCATCCTGAAAAGTCGCAACAATGTTGCAAAAGGCGAACAATTGT AAAAAATTGCTTTCTACCCTGAAAACAGTCCAAAATAACCAAAGGTCGAC GCTGTCAGATACACAACTTAAAAGTTgataaatttgggaccctgtcagat atcttcacaGCAAATAGCAAAAAAGAGACCCTGACATTAAGCGACACGTT CCCCTTCCAACCCAGAGGTTTAGCCTTATTCAGAGGTTACAAGCTGGCTG AATAGTTCAAATGTTTTAAAGAACTtgttaattattttcaaaatacagGT GAAATAGCATATTCAAAGAAGCTAACAGAAGCAAGGTTCGGCACCCGGCT GTTTATACAAATGGTGGACAGCGATTTGAAATTAACGATCGTAGATGCAC AAGACAGTGACGAAGAAACATATACAGCGACAGCACAATTCGGAATCGGC GAAGTCAAGATATTGCAAAGTTTTCGAGTTGAAGTCACAGGTGAGCTACC TTAAGtatattaattttggcgggattaaatttggcggattttagtaaaaa atatcTTCTGggttgttttattacaggttacaTTAAAAATATTCCagtac attttttttcttttattaggcgagaccaatttaatttgttgttctacggg cccgaccgaccctatttttgctaaaatgaaaaaaataataatatcgaatt tctactacaatatattttacacactagttatttgtaagaattaagcttga ataaagctgaaaattaattcaagaaattgaaaatcataaaaagcattcca tacactaaaattttattatggtCTTCATCGAAGAGATCCAGATacttttt agaagattttgtcgttaccttaccaaccctgataaatgaaaaatttattt ttattttgccgaccgaccgacccatatttttctaacgatctgtccgtaga acaacaaattaaattggtctcgccttagaaTAACATttatatgcaggctc agtttttgtggtacctaaacaatggctctattacTAAAGAACAATAGAGT GCTAAGCAttatgcgagcctgatatagggacagtcagttgcttataaaaa aacatgtaaatctcaaaacgtctaaaaatatctaaaaacgcCTTTTTTAA AACGTAATACGGGTGCAAGAACATTTTTACCCTAAGGTATCTTTTCCTGT CTTCGCATCTTTATTTCCAGCTCAATCATCACACGATAAATCTATTTCTT TGGGTTCAGGACTTTCATCTACCGACACCGGCATTATAGTCGGCATCGTC GTCGCAATCGTCGTTCTTATTGTCGTCCTTATCCTGATACGTTATTGTTA CGATCGTAATTATAATCCTGCCGACCATTTAACCGATCCTGAGAAAGACA GCGAAACGCatatttgatgattttgattggttgatcgCTTTGTAAATTAT CATTTCAAAGTGATTTGTTGGTAGTACCAAAGCTGGTAAGCTTGCTGTCG ACATTTCGATTGAATTCCTACGATCAGCATCGACAACTAAATTTCAACTT TGATGCGACAAGGGGCTGGATCTTATTATTAGAGTTGCCGAGTGATGACA GATCGCTTTATCTGTGACAAATGCGTCTTGGGCATTTAGCGTTATTTTTC CAGTTGACCGATAATGTGTACCAATGCGTCGTAACAAAAAATCTTAcaga attttgtgttttttaatcAGAATTCctaaagttttgataaaataactCGG ATTCTACCAGGAAAACTAATTTAGAAAGTTTAGCAAGCGTAGACAAGCGA AAGATGGGAATTTTAATCCTGGGCATTTTAATTAATGAAATTGAAACTGA ATTTTGTGTTCTTTTGGTGGAAAATCTTTATCGCGgatgtatttttaatt tttagtgttAGTAGTAATTTGAATACAATTATCTAATTCATATTTTAGTC TAttaatcaataaaatcaaatttattttctaaaaaatacttatttgtttT TGAGCATGAAAATGTATAAATGTATTGGGAGATTCAACACTCTAAAGACG TTTAGTCAGCTCAGGCAGAGGCTTTCGCttccaaaagtaaaaaaaatcta caattaTTTCTCGACAAAATTAGTTTAATTAAATTTCATACTACTTTTTA AGAATTTAGGATTTTTAGCAACTTACTTGAAAAGAACGACGTGAacgaaa acaagaaaacaagaaaacaaaaaaagattaaaaattgactaaaatttaCG TGGTAAACTCATTTTTTCCAATGATTAATAATGCATAAGATGAATATAAA AGCCATGAATTCTGGTCATCCACTGATAACGTAAGCCAATCATTTTTGAC TCAAGCTGAAGGAGAAAAAATTGACTGTTTTAATTTTATTGTAAGACTCT AATCCCTTATATGGAGATGATAAATCCATTGTAATTGCGAAGGGCTAGAG ATGAATCTCTTGGAAGGGGATGGGAAATAAAGCCGCCTATTTCCCATCCG AAGTGGATTTTACACAAACGACGGATAGAAAgcgaggattccaaaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002274TCONS_00002274Clytia hemisphaericatranscript
TCONS_00002275TCONS_00002275Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002274-proteinTCONS_00002274-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000019supercontigsc0000019:751067..758212 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04 0.08 0 0.04 0.05 0 2.88 4.18 4.23 4.17 2.76 3.05 0.3 0.34 0 0.03 0.68 1.01 1.09 0.79 1.65 1.65 0.87 0.87 0.68 0.56 0.36 0.13 0.1 0.05