XLOC_001127 (gene) - C. hemisphaerica

Overview
NameXLOC_001127
Unique NameXLOC_001127
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000018:836223..839586-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001127 ID=XLOC_001127|Name=XLOC_001127|organism=Clytia hemisphaerica|type=gene|length=3364bp|location=Sequence derived from alignment at sc0000018:836223..839586- (Clytia hemisphaerica)
GAAATTTATTTAGATTAGACTTTCAGCTAAGTACAAGAAACGTCAAACAG GGCTTGAAGCTTTGTTGGGGAATTCTTATCAAATAAACTGTTGTTCAGAA AAGATTGATGTTTTCGAATATTGTTTTAGTTTAAGACATACAAAAATACC ATGCCTTGGACGCCAATAACAACGCCGAACGAACTAGACCATGAGTTTTG GAAGAGTCTCAACCTAAGTACAGATTCCATGGATAAATGGGTGCAAAATG TGAATGTCCTCACTTTGGATGAAAAGGTGAAAGAAATGTTGAATTCTACT GACCAGGATGTTGGTGACGATGGCCATGTTGAAGTTATGAAGGTATGTTT ACCTTTTGCCATCTTAATTTATTATATGACATGAGACATTTCCAAGGTAT AGGCCTTTTCACGGCCCATTATTCCTTTCGACGGTGAAGGTCCTATTATG ACAATTATGACACGCACTTTGAGCTGGGCCGTTTTTGTAAATGTAGATTG AGCTTCTAATATGCTTGAAAGGGAATTTGCCCAGCGAAGCTGTACATTGA TGTAGCTGCGGGTCTGGTGGGTGTACAGAGGGCGAAGCTCCCGAAAAAAT CTTGAATATGTAGATAGTATTAGTTATTTTTTCTTGTAAACAACCAACAA GTTCAATTTTGCTAAAAAATAATAGCTTTCCTATTTTGGATTGAGTTTCA AAAACGTTATTTTGGCCGGACATAAAATAGTGTTTAGAAAAATCCCTGCA CACGCACGCTGCAATGCAATTACATTTTCTGACGTCAGTTTCGACAAGTC TGTTTTTATCTGTCAATTTCATTTCATTCACAACATTCATTTTTAACATT TTATAAAAGGGAAACTTTCGACCATATAAAGCTTAATTTTTGCAGATAAG CGACAACATATTTTTAAATTTACCTGCCTTCTAAAAGATCCAACACGAAT TAATTTTCCCTAATTCTTTTCATAGATCGTGTTTATGATCGATGCTTCAA TTAACATTCTCCTCAATGTCTTGCTTTTCACANTCATAGATCGTGTTTAT GATCGATGCTTCAATTAACATTCTCCTCAATGTCTTACTCTTCACCTTTC TCGTCAAATACATGGCACGTCTCAAATCGAAACACGTCGCAAAATGTTTC ATGAATCTTCAACTTTCCCATCTCTTATTCGGTGTTCTTCTCATCGTCGG TCAGCTCGTTAACCATCGATATCTTCAATTAATCACTTTCGGGATCGTCC TTCAAATGTTCTTTGCAATGATGTTGAAAACTTTGGATCAGTTCATCATT ATCAAATACCCTTATCGGTGAGTTTATTTCTAGTGACACACAGACTAATT TATATTAAGACTTTTTATCTGTTGCATACCTTACTCAGGAGAATGGCTTG AAATCAGTTGGGTAGCAGTAAAATGGAACGAACTTTTTTCTAGACCATTT ATCGCGGTTAAATAGTCTATAGAAAGTCGTTAGGCTAATGCTTATATCAA CCTTCTCATTGCTCAGTCAAAGTGTACACTCCTGTATCACAGACCCACTG GGGCCCCAGTCCCACTGGAAAATTTGGCAAAAATTGCGCCGCCGGTGGGA AAATACCCTTAAATTTCAGACCCACTGGGAAATTGACTTTGATTTCGTCC TCATTCGAAATTCAATGTTTAAAACTTGCACTCCAAAACTATCCCCACTG GGATTTTTAATATTGGAACCTTTTTTTTTTCTATCCCCATTGTGATTTCA ATTGGACTTTTTTTCCACACTGGGCTTTGAGACAGGGGTGTAAATGTTGA GTAAGTATCTTGTTTAGCTTGAGTTATATGGAACATGACATGCTATTAAA AGAAGAATGAAACAAGATGATAGAAATGAATGGAATCTTGTAATTGGAAT TGTATCTTTCCATTCCCTTCAGGTATCAACGCATTCAAACAAGAGATTTG ATGTTCATGATGTTGGCAACTTGGCTTCTAACCACTTTCATTATTCTCAT TATCATGTTCGTCGCCGACATCTCCAACCGTCAATTGACCGTCATCTTAA CGTTCACAATCATCATCTCCGTTCTAACGTTATCCGCATGCAACTTTAGT GTTTACGTTATTGCTCGCCGTCACTACGTTACCATACGTGGACAATACAA GAAACGAAGTACGGGACGTATCCCAAAGAAACCCTTATTGACTTGTATAG CCATTGTGGCAACGTTCGGCTTACTCTGGCTACCATATTTGTTGCATAAC GTATTGTTTCTAGGTAACGTGTATGTTGTTGGAAGGAGCAAGCTGTTCAG TGAGTTAGTGCTTTTTGTAGCATCGTTAAATTCAATCATTGATCCGGTGA TTTTCATTTGGTTCAATAGAGATTTGAAATCTGAACTTTGGTCCTTTAAA GAGAGGAATTCGACCAGGAGAGTTAAAAGACCTTCATTGGTCAATAATAA TACAGATGGCTCTCTCCTTACAAAGACTGAAATTTCATCATGAGAATCAT CTCAAATGCTAATAAAAGCCAAATAACTTGCTTGGCCTTGATCATTATAT TTTTCAGGAGATGGCGCGGATTCACAGGTTTTAAAACTTGAGACCGCGAA CCTCCCACCCCTTACACTTGTGTTGTAGATTATTTATTTTTTTGGATAGT ATCTGTAATTAAAATTTTGTGACAGGAGACAGGACTGACTTCACGAAAAG GTTTTTCCCACTTTTTGGCAAAATTTCATCGATCAATAGTCTAGTTCGTA TTAGATGAACTGAATCAAATGACGTCTTAAGTCTCGATTTGTTACTTGTG ATTGATTAAAGTTTTAAGACATTTTGGCAAATCAAAACATCAAGATCAAG TCCAAAGTCCGTTCTCAAGAAAACAAATATTCAAAAATAATTATTCTGTA GCGGAGTCACGTAAAATTGAAATTTTTGAACATTTCTGTTCAACTTTCGT GTTTTGTTAATTAAACCTCAGGAATAAAATCACTTCTATGGAGTTCTTCC AAAAGGACTACTGTAGACTTTAAACATGCCATGTTTGTTTATTTTTCATA CAAAAAATTTCCCATAGTGATTTTCGAAGATCATGTGATCTGAGGTGACC TTGATGGCAAAGATGTAAACAGAAGCAAGATATGAAATGGGAAATATCTA ATCTAAAGTTCTTCGCAAAATCTTTACCTAACCTAAAAGTCATACCTCTC GACCAATTCTTTCGATCTCCCTTCCCATGTCTTTCTGACAAAATTACAAG CCCTTAAAGAAGGTTAAATAAAAGTGACTTTTTTGGGTTCGAGGCTTTCA AATCCAACTTTCTTTTTTTTAAGATTCAGAAAGGTTGGTAATTTACTACC AAAATTTCATGTCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002163TCONS_00002163Clytia hemisphaericatranscript
TCONS_00002162TCONS_00002162Clytia hemisphaericatranscript
TCONS_00002161TCONS_00002161Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002161-proteinTCONS_00002161-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018supercontigsc0000018:836223..839586 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.06 1.99 0.7 0.85 16.75 14.43 12.8 12.85 6.94 11.76 10.94 9.54 1.74 1.44 0.91 1.34 0.96 1.16 0.44 0.76 4.1 4.11 5.01 3.5 4.11 3.65 12.93 6.09 4.32 4.59