XLOC_001118 (gene) - C. hemisphaerica

Overview
NameXLOC_001118
Unique NameXLOC_001118
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000018:557294..560755-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001118 ID=XLOC_001118|Name=XLOC_001118|organism=Clytia hemisphaerica|type=gene|length=3462bp|location=Sequence derived from alignment at sc0000018:557294..560755- (Clytia hemisphaerica)
GAGCAGTTTGCATGTTTTTTTTATATGAACATCCAAAAATTTGTTCTTAA CTTTTTGAGTTTTAAGCCTTAAGAAGTTCTAAAAATTATTCTTAATTTCA CCATTTTGTGAGTATTTTGGTCCATTTTCCTAAGAAATTGGGTGTTGAAG CCTTATGTTCTTATATAGTGTGTTCTTATGAAAAAAAAAACGTGTTGAGC TCATAAAATCTCATAGAAACTCGTACNGAGACCTTATGTTCTTTTATAGT TTGTTCTTATGAAAAAAACGTGTCCAGCTCATAGAATCTCATAAAAACTC TTATAGAGATATTAATCAAAAGGATGAATTCAAACTCTGGCGAAACTGAC TGGCAATTAATTTACTGGCCTGGTTTCTGTGGACGTGGAGAATTTGTGCG TTTAGTTTTTGAAGAAGCTGGCATCAAGTATGTAGAGAATAATGATGCTG AATATATTTATAAATATTTCAAATGTCATGAGAATGAGATGGATGGATTT CCAATGCTGTCACCACCAATAATCAAAGACAGAAAAAGTAAGTTTTCTCT TTTCCTACATTTGACTTTCTCTCTAATTCGATCCTCAAAGACTTTTCTTC GATTAGAGAAAGATTATAAAGAGTATTTTCCACTACTTTTCAACTGAAAG GACCAGTCTTTTAGTTCGAATTATAGGAAAAATCGAATTATAAAGGTTAG AGTTGAAGAGAGCTGACTCTAAATCTAAACTAGCCATAACTTTCATTAAA GTGACACCGTTCAAAAGGAATGATCTTAGCCCTACAGTAATTTTTGTTAA GAGTGATCTCTCATCTGAGACAAATTCTTTCAAATGCTAACAAATGTGTC AAGGGTGATATACAGTCTACTTAGAGTGACATCCGTGCCTTGTCTTACAC ATTTTTTTTTATAAGAACAATTTCATAACAATACGAGGCTGAATTTTGGC CAAAACCTAAGAACAAATTAAGAAGAATCTAAGCCTCAGATTTCAGAAAT TACTGACAAGTACAGGTTTCCATTTTCATTAATATTAACATTTAAACCTG AAAATCCTTATGCGTGAAGCTATGAATGCCGTCCTCGGAAGCTTTAGGCT TCCTGCGGTAGCAATAAGTTTGAGTTTATCGACCCAGTGAATAATCTTGG ATTACGAAATTTACGTTTGGCTACGTTTTGAGAAATTCTCCTCTCCTCAT CGGGCAAAATATATTTTTATAAATCCTTAGAAAATTACATATGAAAGGAG TTCTTAGGTTTTCCAAAAATACCCAGCTTAATAAAATTTGCGGACTCGGA CCTTAAGCTATATAACCTCTAACAGCTATTCATGTTGCATTGTTTTAATG GCTAGAATAAAATTATTTTGAATAGCTTCAATCTCATAATTTTGACAAGC TATTTTTAACTTAGTCTTAACCTCCCAAGCCTTTTCCAGGTGTAACGTAG ACATTTCTTTCAGTTCAGTCTTGAAGAGAAATATCTGAAGAAATACCCCC TGTAATCTCAGCCGAAGAAAGATAGTGTGCTGAACTATATAACATATCTC TGTAATTTCAAAAGATCTGAATCTTCATTTCAAAGGTTTTGTTTTTTAAG AGTGATATCGTTTGCTTACTCATCACTTTTAATTCACAAGCTTTTTCATA TTGGATTGACACGGATATGGAGCAAGATTGGTCAGAAAAAGGAAAAGAAA AATATCTTTTTGCTTTTATCAGCATGTCCTGATATGAATATGTGTCTGAT ATGAAACGGGAACACTTATATAAAAAAAACCTTTAACCATTTCTTTACAA GCTGGATTTCAATTATGTCAAACACCAGTCATTTGTAAATACCTGGGCAA GAGGTATGGGTTGTATCCTGACAACGAGGCTGATGAATTCCATGCTGATC AAGTCAACGCTACAATTCATGACTATATTGGTGAAGGTTCGTAAAAGAAT TGAAACAAAAAAATACATTTTCTCTTGTTTGTTGATTTTTGAAAATATTT TCAATTTCTCTCAATAACCAGATTTTTAGACTATACTTTCCATATTTTAG GGGTATTCAGAGGCACATCTCCCAACCTCCTTTCCATTGCGACAAGAGAC AGCCCCTTTCTCACTGACCTGGTAGGATTTTTCCAGGCAGTGGGGATAAA AATAATGGTCTGAAACTTGATGGAGATTTCATTTCTTTTGTTTTAAAGTT GGAAAATGACTGCGAGACAGGGATTTGAAAATGGACACATAGAAAATTAT TCCAAACTTTGCTAAATTTGGAGGCGGAAAATACTCTATACTTTGCTGAG AGAGAAATCCTTCTGAGACATAATGGACACTGATAGCTTGTTCAAATCTT TCTAGTAAGTAAGTCTGTGATCGCAGTCGGATCGACCCGAAGACTTCTCT TTCGATAGCTATCTACCCAGAGGTAGAGCATGAATTGCTCCACTCAACCT TGATCCTTCTCTTAATAATTACTGAGCATTAAGCAGAGAGGCATAAAGTA CTATTTTAGAAATCTTTGGTATGACCCGGCTAGGGATTGAGCCAACAACC TTACAAACCGTTGCCGGATGTTCTACCACTACACTATGGTCGCTAAATCT TTCTACCGATTACATTACAGGTCGATTATCTTTTCATGGCATTAGTCCAA ATGAAACCTATGAAATTCAGAAGGAAGAAACTAAACCCTACATTGCACGA TTTGAAAAAGAACGTATACCAAGATATATGAACCATTTTGAGTTATTATT GAAACACAATGACGGGGGAAACGGGTAAGTAAACCTAAAGAAGGTTTCAC TGACCTTAAAAGAAATTCAGAAATATACAAGAAACAAACAATTATAATTG CAACGACTGTCTTGTATATCTAAATTCCATGCCCCCTTTTCAAAAATCAA GAACAACTCAAGAGCTTTTTTGGTAAGATCAGAAATTAAGTTAAAATTAA GTATAGAATCTAGAAAAAAAATAAAACATGCCATATAAAGGTTAAGGAAC ATGTTCTAGAAATTCGTCAAGCAATCTGTCTTTTATTTCTTAGGTACTTA TTCGGCAGCAAGTTAACATACGTTGATTTAGGACTATATCACATTCTTCG AGCAACTGAATTCCAATTCCCACAATCCTGGACCAACATTTTACCCACAA TTCCTTTGCTGAAGACATTTAAAGAACGAATTGAAAATCGACCAAATATC AAATCATACTTGAATTCAGGTCGATTGAAACCATTCTGTGGGGATAGTAT GATGTAATACGCTAATATATAATGTAATATGTAACTCGTATTACTTTGAT GTAATATATAATAGATAATACGTAATATGTAATGCGAAATGTTTTGTATA CTGTAGTAAGGTTTACCAGGGTTTACAACTTATAATGATAACTTTATTTC GTATTTTCATATTTTACTCAGCACACACAGGAAACATACTAGCCTAGTTA ACTAAGCCCTAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002144TCONS_00002144Clytia hemisphaericatranscript
TCONS_00002143TCONS_00002143Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002143-proteinTCONS_00002143-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018supercontigsc0000018:557294..560755 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
GSTA4glutathione S-transferase A4 Homo Sapiens
GSTA1glutathione S-transferase A1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.23 14.12 9.57 7.59 10.34 7.66 25.54 27.25 48.08 43.83 68.47 31.2 34.8 26.13 17.55 33.94 8.61 10.32 10.13 8.34 4.6 3.83 7.24 6.79 4.39 7.3 4.4 1.71 9.49 4.76