XLOC_001113 (gene) - C. hemisphaerica

Overview
NameXLOC_001113
Unique NameXLOC_001113
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000018:340115..346058-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001113 ID=XLOC_001113|Name=XLOC_001113|organism=Clytia hemisphaerica|type=gene|length=5944bp|location=Sequence derived from alignment at sc0000018:340115..346058- (Clytia hemisphaerica)
GATTGAAGCCGACTGCCAATAGTTTCAGTTTCTGTCTGCAAATTTTTTGA ATATAAAAGCTTCCTTTCTGATTTTGCTGAGTTATTGGAATGAAAATGAT GACAGTGCAAAATGTATTTAGATACTTGTAGCTTTAACTCACTGTATGTA CAATACTTGTTGTTGTTGTAATGTTTATTGTTGTTTATTCATTATGACAC ATTGTAAACTTCCTTTTACTGTACATAGTATTTTCATTTCATGTCCTTTC GAGCTCGAAAGCCCTTAGGGTTATTTTTCGTTTAGGAGATTTTTAAATGT ACATAGACCTGAAAAAAGAAAGATATATCATCATCATTTCCACTCATTTA TTGATGGATGGGATGGCGGTAGGTAAGAAGATTGATTGTGTTTTGAAAGG CTGAAGTAGTGTGAAAAGGCAGGACCCTGCCGACGCACCGGACTGTCCGG TGTATATTAATCCGGTGTATTTTTCCGGTGTTAAGAAGTATCCTTTCGTT ACACCGGACACAATAAGTCAGGTGTTAGTCTGGTGTTGTGCATACAGCCG GAATTTTGGACGCCGGACATTATGAAACAAAAATTAAGAAACACTGGACG CACCGGAGTCATGTCCGGTGGGAAAAAAATATCCTTCTCCGACACCGGAC ATCCTGTGTAGAAATTGTCCGGTGGTAGAAAATTTCATTTTACACCTCAA TTGAACGGAATTACGATCAAACCAAATCGAACGCAATCGACCGATTGAAA TTTGATTGTCGAACGCAATCGAATCTCATTCGAATATTACCGCAATTTTC AGATTCGATTGATATTCGATTGTGTTCGATTGATGTTCGATTGCGTTCAA TTGCGTTCGATCGTCGATTCATTGACCCCCGGATTGTTCATCGCATAATT TCTACGGGAAATCAAAAGTAATTTCATTCGGCTTGTGATGTTTGAGAGCT TGGATGTTGGAAAGCTGCAAGAATAAAGCCAGACATTCTCAATCGAACGG AATCGACGATCGAACCAGTCGACCAACAATCGAACCAATCAAATATTACC CAGAATTTTGACGTTCGATTGCGTTCGACAATCGAATTTCAATCAGTCGA TTGCGTTTGATTGAGATCGTCTGGTTAAGTCCGGTGTGCGCCGCGCCGGC AGGGTCCTGTCGTTTACTAATTGATAAAATCAATTATCGATTAAAATGGA TAGCTAATTGATAATTAATCGATTGATTAAATATCAATTAAAAACGATAA TCGATAGCTAAGCGATACTCACAATTTTTCAGCACTCAATTAAATTATCA CCATAGATTTTAAATCGATAATACCGATTAGGGTGGGAAGGTGATGGCGG ACAAGATTGGAGGAAATTGTGTTTTTGAAGATGTAAAAGTTGGATTTGAA AAATTTTGGCCGATAAGAGCAAGGGGGGGAGGGGGTCTGAAGCTTATCGG CCCAATGCATATAAAAATTTTGAAAGTTTTTTGTCAAAGACCCCTTACAA AGTTAATAATTGATATAATATTAAGCAGTTATTGGACAAAGTGGAAACCA ATATGTAAAAATATTGCCAATATTTTTCATATTGGATGAGACTGCGTCCA AATAAATGGTTTATTATCTGTTCATCGCTAAAATACTTCTAGTTTTCAAA CATAATTCCAATCTATGATCTATAAAGCTCGTGAATCTGGCTTCTTGGTA GTTTTTTATTCAAAAGTTTTATTTTTATTTTTATTTTGTGACGTAACGTG TCAAAAAGAAGATGCTCAATTGTCATCATTGAACTCGTTGTGTGAAGTCA ATTTTTGAAATATATAGCCTCCATGGAAGCTATATATTCGAAAATATTGG GCAGTAAAGAAGCCAATCAAATGTCGCTATTTACCCGTGTCGGATAATAA ATGATTAATATCGACATAATCAGATAATTGACAAATTGATACCTTGGCCC TATCGATTTTTAATCGATATCGATTTTTAATCGATAATATCGATGAAACT TCTAATTGATATAATCGATATCTTATATCTGGTCGATATAATCGATGTAC TCACAATTTTTTAGGCGATTAGCTACCGTCAACTGCTCCAACTTGGGACG AGTGGTTGCAACATGGGACTTGTTGATATCTGGCCTGTATTTTTACTTAC TATTAAATCTCTTTGACAACAAATTTGTTTTGATAACTCCACCAAGTTTA TCAATCATACTTCATACTTCACATAATCTGTCATAACATGTCACGATAAC TTTCACTGATAGCGCGCCCTTTTTAACTTTTGTTTTCATTCAAAATGACC TGACGCCGAATGGAGAATTAGAGAATGACCGCCGCCTAACCGCCTTACGC CTACCGCCCACCGCCCACCGCCCACCGCCCAATGGGATTAACAAATAGCG AGTGTGTAACTTGTCGCGCGAGAGTGACGTCAAACCCTCCATCGTTTTGC CACTAATTTGGTCTTCTTTGTTCCAGACACTTGCGCGTGTTCCACTACGG ATTTTTTCATATTTCAATTTAAAAGCCTACTCGGTGCGAAAGAGAGATTG TGTATTTTTTAATACGCGATCCATTAAACTCAAATCCAATGATTTTGGTG GAATGGCTGTCCCATGTTGCGTCAGATAGTCCCAAGTTGGAGCAGTTGAT GGTATCGATTATCGTTTTTGATCGGTATTTAATCAATCGATTAATTATCA ATTAGCTATTGGATTTTAATCAATAATCGATTTTATCGATTAGTAACGTC TGGTTTTGTCTTGTGTTATTTTTAGAATGAACTAGATTTCTTGAGAATAG ATTGAATTGTCCTACAGTGATAGTGATAGTATCTAGCTAGCTAGTATCCA AGAAAACTGGTGGCAAATGCCACCCCCCCTCGAGTGGAAGTTTTTCACAG GGGTGCCCCCCTCCGAAAAACAAAGGGTGCAAAAAGATGCCTTTGGTTAT TAATTTTGGCGCCCCTTTGCTCTTTTACAGCTTAAATGGGTGAATTGCAG AAAAGTCATACAATGTCCCGTCCGCAATAAAAGCACCATTTATGCTTACA AATCAACATCTAGGAACTAGAGAACCCCCTTTTCTTTGTTGTGACATATT GAATGCCTTCTTCTGTTAAAGACATTTTTATTGCCTTCAAATAATCTATT CTGAATTTTTAAACTGGTAAAAACTAATATGGTCCAAAAATTTGTCCTGT CCGCAAGGGCAGAAAATTCTTTTTTAATTTCTCATTTTTTGAGACATCTT TAATGTTCTAACTGTATCAAGCCAATAAACTATAGGGAACAGCGACCGTA GTACTGTGGTAGAGCATCCGGCTAAGGTTCGCAAGGTTGTGGGTTCAACC CCCAGCCGGGTCATACCAAAGATTCCCAAAATTGATGCCTCTCTGCTTGA TGCTCAGCAACTAAGAGAAGGATCAAGGGAAAGTGGAGAAATCCAGGGAG AAAGAGTGGCGCCCTCCCCTACCTTCAGGTAGATAGCTATCAAAAGAGTA GCCTTCGGGTCGCCTCCGACTGCGGTCGCAGACTTACTTATAGGGAACTA CATATGCTTTTTGCAGCAGTATATATTCCTTTTCTTGACATTACATGTAC TGGCTATGAATTAAAAACTTTTTGTCCTATCCGCAACAAAGTGTCTATAA CACTCCAAGGAAGGCTATTTAGTGAAGTTCACAAAAATGTGCTACCGGAT AACGGTAGCAGAAACTGAATCTTTTTAATTGAGTTTTTAATTGAGGCTAC CTTACCACCAAGAACATTATTTAATCTGTCTTATATAATGTAAAATTGGA TTTTAAACCTTTTTTTGATGTCCTAAAAGGCATTTTGCATTTTTAAAGTC ATTACTTCAGTTCCAGCCAGTGCAGTGCTATAATACTTCATACGCCTACT TGATTTTGAATGTCATTTTTTTTAGTTTTTTAAAACATATAGATACAACT TCAATAAACTAGAAAAATTCATCAATCATAAAATGACTGGTAAGAAAAAG ATCTATTTTTTGAAATATTGTTACTTGTTGTTCATGTATAAACTTTTCTT ATTTTTTCTCAATTGAGAGCATTTCTAAAATGCTACTAAAGTAACTTACT GTATCATTAGTATATCTAATTTCTTATATATTTTATTTTTGAAATATGTT TTTTTTTCTTCAATAATTTTCTTTTTCTTATCTTATCCATTTCAAATAGA AAGAACACCACAACATATGACAACATCTGCTGACCGATTCTGGTTGCGCA TTACAAACACATTGCCTGCTAAAGAAATAGGATCAGAAGTCTCGTAAGGA CAAACTTTTGTTTTCAAGTGTTAGTTGAACAACGAAACCATTGAAGTTTT TTTTTTCAAGATGCTTTTTGGCATAGACTTGGACCAAGATTTTACAATTT AAAAGTTATTCTAAATAATGGGATCTATATTCTAATGTGCCTTCTTTCTT AAACTAGAGACTTTTTTCATGATATCTCTCAGATCGATCAATTTTCAATT TTTAGTGTAAGTAATCCAAAAATGCATCGCAAATTGCGAAATACGATACG CTAATTCGATCCCTGTTTCTAATGAAATAGCACTTAATTATCCTGTTACG TTTTGTAATTTGTTTTATAGATTGGGCATAATGGAAAAAGCAATGAACAG GAGAAGAGTTGGCATTAACGTAGGCCTCATTTTGTTTTCATCCATTGCTG CTTTTGCGTATGGACGTCAATTCAGCAAAGAACGAAAAAGTAGAGCTCAA CAAATCGAAGAAGACCAATTCAAATAGATTATTATTTTTTTTGAAGTATA TGGAAATAAGTACAAGATTTTTAGCTACCAGACACAGATTGCTAGCAATT CAAAAGAATTTTAGCTGACTTTGAATGTTGGAATTTTCTTAAATCAACGA AGTAAATCAATAAAAATATTATGTACTATGTGTAATTCAAGTTTTAAACA TATTATTTTTCTTGTATTTTTAAATCTTTAAATCAAATGCAGAAAAATGA TAACTGCGGTGTGAGTTTTTTTCTTTTTTGTAAATACGGACTAATTATTT TTACATTCAGAAACTTAGAAAACAGAATATTTCAAATATAGACTCTGGGT TGTTTTTTTACATCCCTTTTTCTTTCAAAGATGCTCAAAATTAACTAAAA CTTGGTTTTCATAGAAATAAGCGTTCAATTATTATGAGCCTGACCTATTT CCATTTTTTTTTTTCAGTTGAAAAAATTAAACTAAAAATAATAATTATTA AAAATAATAATTACTGAAATTACATATGTCTCTTAGATCAAAGGTAAGAT CATCATTCATCTATCATCTTTTAGGAAAACACTACTCCAGCAGATGTATA ACTTCTTATGTATTTCAATGTTTTTTTTTCAGGTTTTAGGTGCTTATCGT ACTCTTTTACGCACAAGGCAGATAGTGTTTTCAGGCGATGCAGTCGCATT AACAAAAAGTAGAGAGAAAATAAGAGACAGCTTCCTGGCTAATAAACATT TAACCGCATCAGAGGATATTTTACAACAGATTCAATGTGCTAATGAAACA AGTGATTTCTTGCTTCAAGGAGTTGTTCAAGGGAAGTTGAACACACAAGA TAACACATACAAAGTCAAAATTACTGAACATACAAAACTTCACGATAATG TCCCTTTAAAAGAACAGAACAAAGTTGATCTCAATAATTTTGAAATTCCA CAAAAATTCCGCAAGAAGAAGAACTGAATATCATAAGATGAACAAAGAGA ATTTATTTTGAATGTGTAAATAATATTTTATATGAATGAAAAAAAATCAC TTCTAAAAACAAAAACTTTGTTCCCGTAGTCCTAAAATAGACTAAATTCT TGTTGATGGAAACTGTTGATATCAACATCAGTTTAGTTTCCTCCTGGGTT GGTTCCACCGCAGAAATTTTAGACTAGGCCCAGTTCTCAACCCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002136TCONS_00002136Clytia hemisphaericatranscript
TCONS_00002135TCONS_00002135Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002135-proteinTCONS_00002135-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018supercontigsc0000018:340115..346058 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
59.16 55.35 66.19 66.18 61.78 46.23 62.62 65.29 64.28 52.83 50.77 40.55 21.49 17.41 25.18 24.35 42.02 39.8 16.52 19.21 25.05 23.94 50.38 47.2 30.08 38.48 36.24 30.46 37.23 30.65