XLOC_001090 (gene) - C. hemisphaerica

Overview
NameXLOC_001090
Unique NameXLOC_001090
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000018:826925..829595+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001090 ID=XLOC_001090|Name=XLOC_001090|organism=Clytia hemisphaerica|type=gene|length=2671bp|location=Sequence derived from alignment at sc0000018:826925..829595+ (Clytia hemisphaerica)
GTGAAcaaattgttgttgttgttgttgttatttcCAGCAGCTACCAATAT
CATCAACGAAAACGCTATCAAACACTCGAAGAATCCCATGCTTGGTCAGT
TTGTGATGCTATGTTCGCGTCAACCTCCTTCTCCTGTTCACATGAAAGAC
TGATGCTACTTCATTAACAAAGATCCTCTATTTATTTTAAACCATACAGT
TTTGATATGCCATCTTGGGAATTCTGCATGCATTTGTATCAGCAAAAAGG
TAATCTAATATAACTTTTATAATCATTAGAGAGCAACTCAGTTGGGAAAT
GGCATATTCCCAGAACTTGAAAAGTGAAGACGTTTTGAATCCATTGGGAA
TTTATTAGAGATAAGACAGTAATAAGGTCAACTTGTATAAATTGGAAACA
ATATTAGATTGAGCAAGCGTCGAAGAGCATCACATCAGCCACAGAAATTA
TTCGTGTAGATCAGGTAAGCTTCTAAATCCTTTCCTAAATAAAGtggaat
ttgtttatttttcaaatttaaaggtttttctTTGGATCAGAATTTAACTT
CACATTACCATTACTATtacaatcatgaaaaataaattatactTCTATGT
TTCCAGATAATCATCAACATGAAAACACTGGCAATATTGTTGATATGTGT
CGCGGCCACATCTTGTCAAAGAGATGAGCGTTGGTACCCGGTGGACAACT
CTAATGAACTCCATGCAAGATACCCTATTGAGGATGAAGAATACAGAGAG
TCGCCGTTTGTTTCAGAAAGGAGGTATGCTGATCCTTTCCAAGAAAACGA
TATGATGCCAAACTTTTACGAAGAAATCGACGAAAATGTGAAGGAGAGAA
TCACAGGATATGAAAATGTGCCAGAAGTTTTTCCGATACCCAAAGAAGTT
ACAACATCGTCTACAACTACTGGCCCTACCAAATCTGATGCGTCCACTAC
AACTGCCGGCCCTACTACAACCGAATTACCAAAATCATCTCGTATGAACT
TTACTGGCCAAGTAAGACCTGGAAATCTCACTCAAAATTCGCAAATAATG
AAGTCGAAGATTTTAGACAAAGATTTTGAAGACTACCTTCAAATGAAGGA
ACAAGAGGATCCCCTTTGGTTCAAAATACACAAACACAGACGACATCATA
ACAAGAATGTCAACATCAATCATAACTCGAATGTCAATATTAACTCGAAT
CACAACTCCAACTCGAATCACAACTCGAACACAAATGTCAATGTCAACCA
CAACCATAACTCGAACGTGAACATAAACTCCAACCATAACTCTAACACCA
ATATCAACTCGAACCATAACTCGAACACCAATGTCAATCAAAACTCTTTT
AGACCTTTCTACATTGGCAATCTCCCAAAACAATGGCATATTTGTAAGTT
ATTTCATTCACAGTACCAGAAATTTCTCTataaggaaaattttgaaagga
attacaAAAAGCATCATATTCATTGCCTGACTACCAAAAAAGTCGTTGCC
TGCTGTACTTTATAGCTTGACCAACTTATAAAAGCAATAAAAGCAATTAA
CATAGCTATGGTCAAAGGTAGTTCTCTCGTTTGTCTGAATTGAGGATTTC
GAATTgactttttgcaattttgtttCAATCAGGTGGTGGATACATCATCG
ACCAATTTTCGCAATTGTGTTGTCAGGGTAACCCTGTGAACAAACAACCA
TTTTCCAAGTGCTGCGGGTAAGTTGCATcgttttttcaaattcaattggC
TTACAATGCTTGGTTTTTCATATATTTAACTGAACGATCTATCCGATTTC
GGCCCTTTCGGAGCAGCCTTTCTTGCATTTTCATGAGTTGTTAAGGcttt
agaaaacaaaacaagGATTGCGCTTATGAAAATGGATTTATGTGGAATGG
ATTCCACAGATCAGCAATACTTTTTAAAACCAttctatttcaattttatt
ttcagctCTGGACTTTACAACTTGATCACGGAAGATTGTGTTTCTGGTTC
ACCCGTTGCCAAGAAGCTCCCAGAATGTGGTTCTTCCAAAACAACGTATG
ATGCTTTCAAACAGTTTTGTTACCATGGCGATGTCTACACTTATGAAAAA
TATATCGAATGCGACGGTTCTTTGTATTATGTATAATTTTGTATGtagat
tttcatgatttatttGAATATATATTGGAATTCTTTTTTGGATAATTAAA
TGCACAAACTACGCTTTCTGTTGTATTTCAAGCCAGTTAAAGTTCACTTC
acaacatccccttctcacagactcggtgggattttatcagtcAGTGGAAA
TGGAAAtgacggaccaaaactcgatggaaattgttttcatcttttttatg
TCTGGGAATtttaattccattgtttttagccggaaaattcagtgggggtg
gaaaaaattgcaccatattttgcagtgaagatTTGCTGATCTGATAATAT
TCAGCGGGAAGATATTGTGGGActatgagaaaggggtgttttgTATATCT
TCGGCGTTTGAATGTAAGATTTTTTacctcaaaaatattttgataagtTG
AATTGTGAAGAGAAACCATTATCTATAAACCATTAACTATATTAGACACT
TTGTCGTTTATAATCCttttaaatttgaacaaatCAAACTTTACCTGATA
ATACCCCTTCTCATGGACCCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002076TCONS_00002076Clytia hemisphaericatranscript
TCONS_00002077TCONS_00002077Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002077-proteinTCONS_00002077-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018supercontigsc0000018:826925..829595 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1829.84	1843.54	1005.8	746.21	45.76	35.56	9.45	14.1	2.19	9.03	1.59	0.75	1.01	1.65	0.06	0.15	0	0.02	0	0.03	4.61	3.03	631.96	521.84	0.03	0.02	33	41.37	311.95	349.51